Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P23490_001 | Banana | plasma membrane | 85.58 | 82.32 |
| GSMUA_Achr3P13250_001 | Banana | cytosol, peroxisome, plasma membrane | 71.03 | 68.93 |
| VIT_11s0118g00220.t01 | Wine grape | plasma membrane | 68.39 | 66.97 |
| PGSC0003DMT400078919 | Potato | plasma membrane | 66.93 | 65.97 |
| GSMUA_Achr1P26050_001 | Banana | plasma membrane | 66.27 | 64.9 |
| Solyc07g007690.2.1 | Tomato | plasma membrane | 66.53 | 63.83 |
| AT5G33280.1 | Thale cress | plasma membrane | 64.42 | 63.66 |
| CDY12393 | Canola | plasma membrane | 64.02 | 63.35 |
| Bra038948.1-P | Field mustard | plasma membrane | 63.89 | 63.22 |
| CDY47559 | Canola | plasma membrane | 63.76 | 63.09 |
| KRH20183 | Soybean | plasma membrane | 63.76 | 63.01 |
| GSMUA_Achr6P24170_001 | Banana | plasma membrane | 58.33 | 60.66 |
| GSMUA_Achr6P07410_001 | Banana | plasma membrane | 61.11 | 60.31 |
| GSMUA_Achr8P08450_001 | Banana | plasma membrane | 57.41 | 54.66 |
| GSMUA_Achr3P16100_001 | Banana | plasma membrane | 49.74 | 51.86 |
| GSMUA_Achr3P21820_001 | Banana | plasma membrane | 60.05 | 50.61 |
| GSMUA_Achr4P06890_001 | Banana | plasma membrane | 39.15 | 43.53 |
| GSMUA_Achr4P06880_001 | Banana | cytosol | 4.89 | 40.22 |
| GSMUA_Achr7P27080_001 | Banana | mitochondrion, plasma membrane | 13.36 | 35.82 |
Protein Annotations
| MapMan:24.2.16 | InterPro:CBS_dom | InterPro:Cl-channel_core | InterPro:Cl-channel_volt-gated | InterPro:Cl_channel_pln | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005216 | GO:GO:0005247 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006811 |
| GO:GO:0006821 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0034220 | GO:GO:0055085 |
| GO:GO:1902476 | EnsemblPlantsGene:GSMUA_Achr6G02920_001 | EnsemblPlants:GSMUA_Achr6P02920_001 | EnsemblPlants:GSMUA_Achr6T02920_001 | InterPro:IPR000644 | InterPro:IPR014743 |
| UniProt:M0T3P0 | PFAM:PF00571 | PFAM:PF00654 | PRINTS:PR00762 | PRINTS:PR01120 | PFscan:PS51371 |
| PANTHER:PTHR11689 | PANTHER:PTHR11689:SF66 | SMART:SM00116 | SUPFAM:SSF54631 | SUPFAM:SSF81340 | TMHMM:TMhelix |
| UniParc:UPI000295F319 | SEG:seg | : | : | : | : |
Description
Putative chloride channel-like protein CLC-g [Source:GMGC_GENE;Acc:GSMUA_Achr6G02920_001]
Coordinates
chr6:+:1994179..1998603
Molecular Weight (calculated)
82453.2 Da
IEP (calculated)
8.125
GRAVY (calculated)
0.436
Length
756 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSEELDDVE TPLLHSASDS HLEDHFLRIR RSAPVTTSQL AIIGSSLCPI ESLDYELIEN DFFKQDWRSR GEAHIVRYVI LKWTLCFLVG AVAGAVGFFN
101: NLAIENIAGV KFVVTSNMML AGKYKWAFLV FASTNFVLLM FASVITTYIS PAAAGSGIPE VMAYLNGVDA PDIFSLKTFF VKVVGCIAAV SSSLHVGKAG
201: PMIHTSACIA SILGQGGSRK YRLTCKWLRY FKNDRDRRDL VTCGAGAGVA AAFRAPVGGV LFALECVSSW WRSALLWRAF FTTAVVVVVL RALIDVCNSG
301: KCGLFGKGGL IMFDVTSADV TYHLDDLPPV IVLGIIGGIL GSSYNFLLDK VLRIYNLINE KGHVCKLFLT ASVSIFTSCC LFGMPWLASC KPCPAESSEA
401: CPSIGRSGNF KNFQCPPDQY NDLASLFFNT NDDTIRNLYS AGTDNVFQKT SIILFLITSY FLGIISYGLA VPSGLFVPVI LTGATYGRLV GMLMGSHSTL
501: NHGLFAVLGS ASLLGGSMRM TVSVCVVMLE LTNNLLLLPL VMLVLLISKS LTVADVVRGP LQIFNGVEKV SNIVHVLKTT GHHGFPVVDE PPFSNSPVLF
601: GLILRANLLV LLKKKEFLRT CTLASLDASR HFSADDFAKC GSGKHENVEG IELTAEEMDM YIDLHPFTNT SPYTVVETMS LAKAGILFRE VGLRHLLIVP
701: KSSSTTPVVG ILTRHDFMPE LILGLHPVLL QSRWKKTRVG KSNLIQLFYD LCRFQK
101: NLAIENIAGV KFVVTSNMML AGKYKWAFLV FASTNFVLLM FASVITTYIS PAAAGSGIPE VMAYLNGVDA PDIFSLKTFF VKVVGCIAAV SSSLHVGKAG
201: PMIHTSACIA SILGQGGSRK YRLTCKWLRY FKNDRDRRDL VTCGAGAGVA AAFRAPVGGV LFALECVSSW WRSALLWRAF FTTAVVVVVL RALIDVCNSG
301: KCGLFGKGGL IMFDVTSADV TYHLDDLPPV IVLGIIGGIL GSSYNFLLDK VLRIYNLINE KGHVCKLFLT ASVSIFTSCC LFGMPWLASC KPCPAESSEA
401: CPSIGRSGNF KNFQCPPDQY NDLASLFFNT NDDTIRNLYS AGTDNVFQKT SIILFLITSY FLGIISYGLA VPSGLFVPVI LTGATYGRLV GMLMGSHSTL
501: NHGLFAVLGS ASLLGGSMRM TVSVCVVMLE LTNNLLLLPL VMLVLLISKS LTVADVVRGP LQIFNGVEKV SNIVHVLKTT GHHGFPVVDE PPFSNSPVLF
601: GLILRANLLV LLKKKEFLRT CTLASLDASR HFSADDFAKC GSGKHENVEG IELTAEEMDM YIDLHPFTNT SPYTVVETMS LAKAGILFRE VGLRHLLIVP
701: KSSSTTPVVG ILTRHDFMPE LILGLHPVLL QSRWKKTRVG KSNLIQLFYD LCRFQK
001: MPNSTTEDSV AVPLLPSLRR ATNSTSQVAI VGANVCPIES LDYEIAENDF FKQDWRGRSK VEIFQYVFMK WLLCFCIGII VSLIGFANNL AVENLAGVKF
101: VVTSNMMIAG RFAMGFVVFS VTNLILTLFA SVITAFVAPA AAGSGIPEVK AYLNGVDAPE IFSLRTLIIK IIGNISAVSA SLLIGKAGPM VHTGACVASI
201: LGQGGSKRYR LTWRWLRFFK NDRDRRDLVT CGAAAGIAAS FRAPVGGVLF ALEEMSSWWR SALLWRIFFS TAVVAIVLRA LIDVCLSGKC GLFGKGGLIM
301: FDVYSENASY HLGDVLPVLL LGVVGGILGS LYNFLLDKVL RAYNYIYEKG VTWKILLACA ISIFTSCLLF GLPFLASCQP CPVDALEECP TIGRSGNFKK
401: YQCPPGHYND LASLIFNTND DAIKNLFSKN TDFEFHYFSV LVFFVTCFFL SIFSYGIVAP AGLFVPVIVT GASYGRFVGM LLGSNSNLNH GLFAVLGAAS
501: FLGGTMRMTV STCVILLELT NNLLLLPMMM VVLLISKTVA DGFNANIYNL IMKLKGFPYL YSHAEPYMRQ LLVGDVVTGP LQVFNGIEKV ETIVHVLKTT
601: NHNGFPVVDG PPLAAAPVLH GLILRAHILT LLKKRVFMPS PVACDSNTLS QFKAEEFAKK GSGRSDKIED VELSEEELNM YLDLHPFSNA SPYTVVETMS
701: LAKALILFRE VGIRHLLVIP KTSNRPPVVG ILTRHDFMPE HILGLHPSVS RSKWKRLRIR LPFFS
101: VVTSNMMIAG RFAMGFVVFS VTNLILTLFA SVITAFVAPA AAGSGIPEVK AYLNGVDAPE IFSLRTLIIK IIGNISAVSA SLLIGKAGPM VHTGACVASI
201: LGQGGSKRYR LTWRWLRFFK NDRDRRDLVT CGAAAGIAAS FRAPVGGVLF ALEEMSSWWR SALLWRIFFS TAVVAIVLRA LIDVCLSGKC GLFGKGGLIM
301: FDVYSENASY HLGDVLPVLL LGVVGGILGS LYNFLLDKVL RAYNYIYEKG VTWKILLACA ISIFTSCLLF GLPFLASCQP CPVDALEECP TIGRSGNFKK
401: YQCPPGHYND LASLIFNTND DAIKNLFSKN TDFEFHYFSV LVFFVTCFFL SIFSYGIVAP AGLFVPVIVT GASYGRFVGM LLGSNSNLNH GLFAVLGAAS
501: FLGGTMRMTV STCVILLELT NNLLLLPMMM VVLLISKTVA DGFNANIYNL IMKLKGFPYL YSHAEPYMRQ LLVGDVVTGP LQVFNGIEKV ETIVHVLKTT
601: NHNGFPVVDG PPLAAAPVLH GLILRAHILT LLKKRVFMPS PVACDSNTLS QFKAEEFAKK GSGRSDKIED VELSEEELNM YLDLHPFSNA SPYTVVETMS
701: LAKALILFRE VGIRHLLVIP KTSNRPPVVG ILTRHDFMPE HILGLHPSVS RSKWKRLRIR LPFFS
Arabidopsis Description
CLC-GPutative chloride channel-like protein CLC-g [Source:UniProtKB/Swiss-Prot;Acc:P60300]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.