CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
plasma membrane 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0118g00220.t01	Wine grape	plasma membrane	75.56	74.87
AT5G33280.1	Thale cress	plasma membrane	73.46	73.46
PGSC0003DMT400078919	Potato	plasma membrane	73.07	72.88
Bra038948.1-P	Field mustard	plasma membrane	72.68	72.77
CDY47559	Canola	plasma membrane	72.55	72.64
CDY12393	Canola	plasma membrane	72.42	72.51
Solyc07g007690.2.1	Tomato	plasma membrane	73.07	70.94
GSMUA_Achr5P23490_001	Banana	plasma membrane	68.37	66.54
GSMUA_Achr6P02920_001	Banana	plasma membrane	63.01	63.76
Zm00001d002091_P002	Maize	plasma membrane	62.88	63.46
Zm00001d039812_P001	Maize	plasma membrane	20.13	62.86
GSMUA_Achr3P13250_001	Banana	cytosol, peroxisome, plasma membrane	63.27	62.13
EES11540	Sorghum	plasma membrane	65.62	61.67
TraesCS2D01G519000.2	Wheat	plasma membrane	64.84	60.64
TraesCS2B01G546000.1	Wheat	plasma membrane	64.58	60.47
TraesCS2A01G517500.3	Wheat	plasma membrane	64.71	60.22
Zm00001d015702_P001	Maize	plasma membrane	50.72	59.88
Os08t0300300-01	Rice	plasma membrane	62.22	59.8
TraesCS5A01G449500.2	Wheat	plasma membrane	58.43	59.36
GSMUA_Achr1P26050_001	Banana	plasma membrane	59.35	58.81
EES06435	Sorghum	plasma membrane	60.52	58.39
TraesCS5B01G457100.1	Wheat	plasma membrane	60.0	57.95
TraesCS5D01G456000.1	Wheat	plasma membrane	60.0	57.95
KRH38787	Soybean	cytosol	58.17	56.4
KRH09287	Soybean	cytosol, nucleus, plasma membrane	57.91	55.65
KRH57669	Soybean	plasma membrane	50.85	50.06
KRG94508	Soybean	plasma membrane	51.63	50.0
HORVU5Hr1G107380.2	Barley	plastid	55.03	49.82
KRH06955	Soybean	plasma membrane	48.37	49.66
Zm00001d015700_P001	Maize	plasma membrane	13.73	47.73
KRH77868	Soybean	plasma membrane	47.06	44.94
KRH27622	Soybean	plasma membrane	46.93	44.82

Protein Annotations

EntrezGene:100817901	MapMan:24.2.16	Gene3D:3.10.580.10	EMBL:ACUP02008247	InterPro:CBS_dom	InterPro:Cl-channel_core
InterPro:Cl-channel_volt-gated	InterPro:Cl_channel_pln	EnsemblPlantsGene:GLYMA_13G161800	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216
GO:GO:0005247	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006821	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	GO:GO:1902476	UniProt:I1LZS8	InterPro:IPR000644
InterPro:IPR014743	EnsemblPlants:KRH20183	ProteinID:KRH20183	ProteinID:KRH20183.1	ProteinID:KRH20184.1	PFAM:PF00571
PFAM:PF00654	PRINTS:PR00762	PRINTS:PR01120	PFscan:PS51371	PANTHER:PTHR11689	PANTHER:PTHR11689:SF66
SMART:SM00116	SUPFAM:SSF54631	SUPFAM:SSF81340	TMHMM:TMhelix	UniParc:UPI000211EBEA	SEG:seg

Description

hypothetical protein

Coordinates

chr13:-:27737666..27743348

Molecular Weight (calculated)

83801.7 Da

IEP (calculated)

8.800

GRAVY (calculated)

0.494

Length

765 amino acids

Sequence
(BLAST)

001: MSTNYSTNGD SETLLRRPLL SSQRSIVNST SQVAIVGSNV SPIESLDYEI FENEFFKHDW RSRGKAQIFQ FMIMKWLLCL LIGMIVCLVG FCNNLAVENL
101: AGIKFVVTSN MMLERRFLMA FLVFFVSNLV LTVFACTITA LIAPTATGSG IPEVKAYLNG VDAPGIFTVR TLLVKIIGSI TAVSSSLLIG KAGPMVHTGA
201: CVAALLGQGG SKRYGLTWKW LKFFKNDRDR RDLIICGSAA GIAAAFRAPV GGVLFALEGM SSWWRSALLW RAFFTAAIVA ILLRALIDLC LSGKCGLFGK
301: GGLIMFDAYS ASISYHLVDV PPVFVLGVIG GILGSLFNLI LSKVLRIYNF INEKGTIFKI LLACLISIFT SCLLFGLPWL TSCRPCPPDP SEPCPTIGRS
401: GIYKKFQCPP NHYNDLASLI FNTNDDAIRN LFSKNTDDEF EFKSVFIFFI TCFSLSIFSY GVVAPAGLFV PVIVTGASYG RIVGMLLGKK DSLSHGLYAV
501: LGAASFLGGS MRTTVSLCVI ILELTNNLLL LPLIMMVLFI SKTVADAFNA NIYDIIMKAK GLPYLETHAE PYMRQLSVGD VVTGPLQTFN GVEKVCNIVF
601: ILRTTGHNGF PVIDEPPISQ APVLFGIILR DHLLTLLKKK AFMSSPMATS GDVINEFSAD DFAKKGSSKG RLKIEDIQLS EEEMDMFIDL HPFTNASPYT
701: VVETMSLGKA LTLFRELGLR HLLVVPKFSG RSPVVGILTR HDFMSEHILG LHPFLVRNTG KSLRF

Best Arabidopsis Sequence Match ( AT5G33280.1 )
(BLAST)

001: MPNSTTEDSV AVPLLPSLRR ATNSTSQVAI VGANVCPIES LDYEIAENDF FKQDWRGRSK VEIFQYVFMK WLLCFCIGII VSLIGFANNL AVENLAGVKF
101: VVTSNMMIAG RFAMGFVVFS VTNLILTLFA SVITAFVAPA AAGSGIPEVK AYLNGVDAPE IFSLRTLIIK IIGNISAVSA SLLIGKAGPM VHTGACVASI
201: LGQGGSKRYR LTWRWLRFFK NDRDRRDLVT CGAAAGIAAS FRAPVGGVLF ALEEMSSWWR SALLWRIFFS TAVVAIVLRA LIDVCLSGKC GLFGKGGLIM
301: FDVYSENASY HLGDVLPVLL LGVVGGILGS LYNFLLDKVL RAYNYIYEKG VTWKILLACA ISIFTSCLLF GLPFLASCQP CPVDALEECP TIGRSGNFKK
401: YQCPPGHYND LASLIFNTND DAIKNLFSKN TDFEFHYFSV LVFFVTCFFL SIFSYGIVAP AGLFVPVIVT GASYGRFVGM LLGSNSNLNH GLFAVLGAAS
501: FLGGTMRMTV STCVILLELT NNLLLLPMMM VVLLISKTVA DGFNANIYNL IMKLKGFPYL YSHAEPYMRQ LLVGDVVTGP LQVFNGIEKV ETIVHVLKTT
601: NHNGFPVVDG PPLAAAPVLH GLILRAHILT LLKKRVFMPS PVACDSNTLS QFKAEEFAKK GSGRSDKIED VELSEEELNM YLDLHPFSNA SPYTVVETMS
701: LAKALILFRE VGIRHLLVIP KTSNRPPVVG ILTRHDFMPE HILGLHPSVS RSKWKRLRIR LPFFS

Arabidopsis Description

CLC-GPutative chloride channel-like protein CLC-g [Source:UniProtKB/Swiss-Prot;Acc:P60300]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.