Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 5
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d015702_P001 | Maize | plasma membrane | 76.29 | 93.36 |
| Os08t0300300-01 | Rice | plasma membrane | 89.16 | 88.82 |
| TraesCS5A01G449500.2 | Wheat | plasma membrane | 80.2 | 84.46 |
| TraesCS5D01G456000.1 | Wheat | plasma membrane | 83.86 | 83.96 |
| TraesCS5B01G457100.1 | Wheat | plasma membrane | 83.73 | 83.84 |
| Zm00001d015700_P001 | Maize | plasma membrane | 22.82 | 82.27 |
| HORVU5Hr1G107380.2 | Barley | plastid | 74.91 | 70.3 |
| GSMUA_Achr3P13250_001 | Banana | cytosol, peroxisome, plasma membrane | 66.58 | 67.78 |
| GSMUA_Achr1P26050_001 | Banana | plasma membrane | 64.31 | 66.06 |
| PGSC0003DMT400078919 | Potato | plasma membrane | 61.41 | 63.49 |
| AT5G33280.1 | Thale cress | plasma membrane | 60.53 | 62.75 |
| EES11540 | Sorghum | plasma membrane | 64.06 | 62.41 |
| VIT_11s0118g00220.t01 | Wine grape | plasma membrane | 60.66 | 62.31 |
| Solyc07g007690.2.1 | Tomato | plasma membrane | 61.66 | 62.06 |
| Bra038948.1-P | Field mustard | plasma membrane | 59.39 | 61.65 |
| CDY47559 | Canola | plasma membrane | 59.27 | 61.52 |
| CDY12393 | Canola | plasma membrane | 59.27 | 61.52 |
| KRH20183 | Soybean | plasma membrane | 58.39 | 60.52 |
| EES12223 | Sorghum | plasma membrane | 58.39 | 58.02 |
| OQU85125 | Sorghum | plasma membrane | 58.26 | 56.69 |
| EES01847 | Sorghum | cytosol, peroxisome, plasma membrane | 54.35 | 54.21 |
| EER90148 | Sorghum | plasma membrane | 48.68 | 48.19 |
| KXG37802 | Sorghum | plasma membrane | 43.51 | 43.23 |
Protein Annotations
| Gene3D:1.10.3080.10 | MapMan:24.2.16 | Gene3D:3.10.580.10 | EntrezGene:8079456 | UniProt:C5XXD5 | InterPro:CBS_dom |
| InterPro:Cl-channel_core | InterPro:Cl-channel_volt-gated | InterPro:Cl_channel_pln | EnsemblPlants:EES06435 | ProteinID:EES06435 | ProteinID:EES06435.1 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005216 | GO:GO:0005247 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0006811 | GO:GO:0006821 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 |
| GO:GO:1902476 | InterPro:IPR000644 | InterPro:IPR014743 | PFAM:PF00571 | PFAM:PF00654 | PRINTS:PR00762 |
| PRINTS:PR01120 | PFscan:PS51371 | PANTHER:PTHR11689 | PANTHER:PTHR11689:SF97 | SMART:SM00116 | EnsemblPlantsGene:SORBI_3004G075800 |
| SUPFAM:SSF54631 | SUPFAM:SSF81340 | unigene:Sbi.18171 | TMHMM:TMhelix | UniParc:UPI0001A85C05 | RefSeq:XP_002453459.1 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:6171321..6178958
Molecular Weight (calculated)
86157.6 Da
IEP (calculated)
8.902
GRAVY (calculated)
0.337
Length
793 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSPPEDVTV GMEEEQRPLN RALLHRSATN NTSQVAMVGS NPCPIESLDY EMIENELFDQ NWRTRSKGDQ VRYVVLKWAF CFAIGILTGT VGFVINLAVE
101: NVAGFKHQAV SALMDSTSYW TAFWVFAGGN LALLLLASSI TSFVSPAAGG SGIPEVKAYL NGVDAPNIFS LRTLAVKVVG NIAGVSSSLH VGKAGPMVHT
201: GACIAAIFGQ GGSRKYGLTC RWLRYFKNDR DRRDLVTIGA GAGVAAAFRA PVGGVLFALE SLSSWWRSAL IWRSFFTTAV VAVVLRLFIE LCASGRCGMF
301: GRGGLIMYDV STIFDDLMTY HLKDIPTVIL IGVTGALLGG LYNFLMIKVL RVYNAINERG GAHKLLLAAT VSMVTSCCVF GLPWLAPCRP CPTTGPLASP
401: DGTCHALNRF RRFHCPAGHY NDLASLFLNI NDDAIRNLYT TGTNDVYHPA SMAIFFVASY ALGVLSYGVV APSGLFVPII LTGATYGRLV AMLLGGRSGL
501: DHGLVAILGS ASFLGGTLRM TVSVCVIILE LTNNLLLLPL VMLVLLISKT VADSFNSSIY DLILRLKGLP HLDGHAEPYM RQLTVGDVVA GPLRSFGGVE
601: KVGSVVHTLR TTGHHAFPVV DEPPFSPGPP VLYGLVLRAH LLVLLKKREF LAAPERCRKE YVAGRFQAED FDKRGSGKQD AIADVVLSPE EMEMYVDLHP
701: FTNTSPYTVV ETMSLAKALV LFREVGLRHL LVVPKACDRS PVVGILTRHD FMPEHILGLH PVLLKSRWKR LRWQRGAVAK YLRSLIEWVA NSG
101: NVAGFKHQAV SALMDSTSYW TAFWVFAGGN LALLLLASSI TSFVSPAAGG SGIPEVKAYL NGVDAPNIFS LRTLAVKVVG NIAGVSSSLH VGKAGPMVHT
201: GACIAAIFGQ GGSRKYGLTC RWLRYFKNDR DRRDLVTIGA GAGVAAAFRA PVGGVLFALE SLSSWWRSAL IWRSFFTTAV VAVVLRLFIE LCASGRCGMF
301: GRGGLIMYDV STIFDDLMTY HLKDIPTVIL IGVTGALLGG LYNFLMIKVL RVYNAINERG GAHKLLLAAT VSMVTSCCVF GLPWLAPCRP CPTTGPLASP
401: DGTCHALNRF RRFHCPAGHY NDLASLFLNI NDDAIRNLYT TGTNDVYHPA SMAIFFVASY ALGVLSYGVV APSGLFVPII LTGATYGRLV AMLLGGRSGL
501: DHGLVAILGS ASFLGGTLRM TVSVCVIILE LTNNLLLLPL VMLVLLISKT VADSFNSSIY DLILRLKGLP HLDGHAEPYM RQLTVGDVVA GPLRSFGGVE
601: KVGSVVHTLR TTGHHAFPVV DEPPFSPGPP VLYGLVLRAH LLVLLKKREF LAAPERCRKE YVAGRFQAED FDKRGSGKQD AIADVVLSPE EMEMYVDLHP
701: FTNTSPYTVV ETMSLAKALV LFREVGLRHL LVVPKACDRS PVVGILTRHD FMPEHILGLH PVLLKSRWKR LRWQRGAVAK YLRSLIEWVA NSG
001: MPNSTTEDSV AVPLLPSLRR ATNSTSQVAI VGANVCPIES LDYEIAENDF FKQDWRGRSK VEIFQYVFMK WLLCFCIGII VSLIGFANNL AVENLAGVKF
101: VVTSNMMIAG RFAMGFVVFS VTNLILTLFA SVITAFVAPA AAGSGIPEVK AYLNGVDAPE IFSLRTLIIK IIGNISAVSA SLLIGKAGPM VHTGACVASI
201: LGQGGSKRYR LTWRWLRFFK NDRDRRDLVT CGAAAGIAAS FRAPVGGVLF ALEEMSSWWR SALLWRIFFS TAVVAIVLRA LIDVCLSGKC GLFGKGGLIM
301: FDVYSENASY HLGDVLPVLL LGVVGGILGS LYNFLLDKVL RAYNYIYEKG VTWKILLACA ISIFTSCLLF GLPFLASCQP CPVDALEECP TIGRSGNFKK
401: YQCPPGHYND LASLIFNTND DAIKNLFSKN TDFEFHYFSV LVFFVTCFFL SIFSYGIVAP AGLFVPVIVT GASYGRFVGM LLGSNSNLNH GLFAVLGAAS
501: FLGGTMRMTV STCVILLELT NNLLLLPMMM VVLLISKTVA DGFNANIYNL IMKLKGFPYL YSHAEPYMRQ LLVGDVVTGP LQVFNGIEKV ETIVHVLKTT
601: NHNGFPVVDG PPLAAAPVLH GLILRAHILT LLKKRVFMPS PVACDSNTLS QFKAEEFAKK GSGRSDKIED VELSEEELNM YLDLHPFSNA SPYTVVETMS
701: LAKALILFRE VGIRHLLVIP KTSNRPPVVG ILTRHDFMPE HILGLHPSVS RSKWKRLRIR LPFFS
101: VVTSNMMIAG RFAMGFVVFS VTNLILTLFA SVITAFVAPA AAGSGIPEVK AYLNGVDAPE IFSLRTLIIK IIGNISAVSA SLLIGKAGPM VHTGACVASI
201: LGQGGSKRYR LTWRWLRFFK NDRDRRDLVT CGAAAGIAAS FRAPVGGVLF ALEEMSSWWR SALLWRIFFS TAVVAIVLRA LIDVCLSGKC GLFGKGGLIM
301: FDVYSENASY HLGDVLPVLL LGVVGGILGS LYNFLLDKVL RAYNYIYEKG VTWKILLACA ISIFTSCLLF GLPFLASCQP CPVDALEECP TIGRSGNFKK
401: YQCPPGHYND LASLIFNTND DAIKNLFSKN TDFEFHYFSV LVFFVTCFFL SIFSYGIVAP AGLFVPVIVT GASYGRFVGM LLGSNSNLNH GLFAVLGAAS
501: FLGGTMRMTV STCVILLELT NNLLLLPMMM VVLLISKTVA DGFNANIYNL IMKLKGFPYL YSHAEPYMRQ LLVGDVVTGP LQVFNGIEKV ETIVHVLKTT
601: NHNGFPVVDG PPLAAAPVLH GLILRAHILT LLKKRVFMPS PVACDSNTLS QFKAEEFAKK GSGRSDKIED VELSEEELNM YLDLHPFSNA SPYTVVETMS
701: LAKALILFRE VGIRHLLVIP KTSNRPPVVG ILTRHDFMPE HILGLHPSVS RSKWKRLRIR LPFFS
Arabidopsis Description
CLC-GPutative chloride channel-like protein CLC-g [Source:UniProtKB/Swiss-Prot;Acc:P60300]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.