Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 2
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d033597_P004 | Maize | plasma membrane | 94.11 | 96.16 |
| Os03t0695700-01 | Rice | extracellular, plasma membrane | 30.33 | 89.96 |
| TraesCS4D01G033500.1 | Wheat | plasma membrane | 90.48 | 89.91 |
| TraesCS4A01G277600.2 | Wheat | plasma membrane | 90.73 | 89.83 |
| TraesCS4B01G035500.1 | Wheat | plasma membrane | 90.48 | 89.58 |
| HORVU0Hr1G040330.16 | Barley | plasma membrane | 65.41 | 88.78 |
| HORVU4Hr1G005590.4 | Barley | plasma membrane | 23.43 | 86.98 |
| GSMUA_Achr4P06890_001 | Banana | plasma membrane | 69.92 | 82.06 |
| GSMUA_Achr4P06880_001 | Banana | cytosol | 9.27 | 80.43 |
| VIT_05s0020g03090.t01 | Wine grape | plasma membrane | 76.82 | 76.62 |
| Bra009891.1-P | Field mustard | plasma membrane | 74.81 | 75.38 |
| CDX88226 | Canola | plasma membrane | 74.81 | 75.38 |
| AT5G26240.1 | Thale cress | plasma membrane | 74.44 | 75.0 |
| KRH77868 | Soybean | plasma membrane | 75.19 | 74.91 |
| CDY52633 | Canola | plasma membrane | 75.19 | 74.81 |
| KRH27622 | Soybean | plasma membrane | 74.81 | 74.53 |
| Solyc09g075800.2.1 | Tomato | plasma membrane | 73.31 | 73.77 |
| EES12223 | Sorghum | plasma membrane | 45.49 | 45.49 |
| OQU85125 | Sorghum | plasma membrane | 45.49 | 44.54 |
| EES01847 | Sorghum | cytosol, peroxisome, plasma membrane | 43.98 | 44.15 |
| EES06435 | Sorghum | plasma membrane | 43.23 | 43.51 |
| EES11540 | Sorghum | plasma membrane | 43.48 | 42.63 |
| EER90148 | Sorghum | plasma membrane | 40.35 | 40.2 |
Protein Annotations
| Gene3D:1.10.3080.10 | MapMan:24.2.16 | Gene3D:3.10.580.10 | UniProt:A0A1B6QIQ2 | InterPro:CBS_dom | InterPro:Cl-channel_core |
| InterPro:Cl-channel_volt-gated | InterPro:Cl_channel_pln | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005216 | GO:GO:0005247 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005802 |
| GO:GO:0006810 | GO:GO:0006811 | GO:GO:0006821 | GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009826 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0034220 |
| GO:GO:0040007 | GO:GO:0055085 | GO:GO:1902476 | InterPro:IPR000644 | InterPro:IPR014743 | EnsemblPlants:KXG37802 |
| ProteinID:KXG37802 | ProteinID:KXG37802.1 | PFAM:PF00571 | PFAM:PF00654 | PRINTS:PR00762 | PRINTS:PR01120 |
| PFscan:PS51371 | PANTHER:PTHR11689 | PANTHER:PTHR11689:SF92 | SMART:SM00116 | EnsemblPlantsGene:SORBI_3001G128300 | SUPFAM:SSF54631 |
| SUPFAM:SSF81340 | TMHMM:TMhelix | UniParc:UPI00081AD35A | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr1:+:10096139..10108071
Molecular Weight (calculated)
87718.0 Da
IEP (calculated)
8.081
GRAVY (calculated)
0.257
Length
798 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSGVDHDVP DGIGMARLAW TRLPTADGEE AGPSTSAAAD YELLSAAAIE SLDYEVIENY AYREEQAQRS KFWVPYYVML KWLFSLLIGV GTGLAAIFIN
101: LAVENFSGWK YTATFAIIKH SYFVGFFVYT VFNLALVFSS VYIVTNFAPA AAGSGIPEIK GYLNGVDTPG ILLLRTLVGK IFGSIGSVGG GLALGKEGPL
201: VHTGACIASL LGQGGSAKYH LNSRWVRIFE SDRDRRDLVT CGCAAGVAAA FRAPVGGVLF ALEEVTSWWR SHLMWRVFFT SAVVAVVVRS AMNWCNSGKC
301: GHFGAGGFII WDISGGQEDY SYQELFPMAI IGVIGGLLGA LFNQLTLYIT KWRRTYLHKK GKRVQIFEAC LISLVTSTIS FVLPLLRKCS PCPQLETNSG
401: IECPHPPGTD GNFVNFYCSK DREYNDLATI FFNTQDDAIR NLFSAKTFHE YSAQSLITFL VMFYSLAVVT FGTAVPAGQF VPGIMIGSTY GRLVGMFVVK
501: FYKKLNIEEG TYALLGAASF LGGSMRMTVS LCVIMVEITN NLQLLPLIML VLLVSKAVGD FFNEGLYEEQ ARLRGIPLLD SRPKQVMRNM TAKDACKNQK
601: VVCLPRVSRI VDIVSVLRTN KHNGFPVVDR GQNGEPLVIG LILRSHLLVL LQAKVDFQNS PFPCGPGVLN RHNFSDFVKP ASSKGKSIDD IHLTEDELGL
701: YLDLAPFLNP SPYIVPEDMS LAKVYNLFRQ LGLRHIFVVP RPSRVVGLIT RKDLLLEEHS NNVMAELQST SVRGLLNGKM LGGNVHLERP LLDNLVIE
101: LAVENFSGWK YTATFAIIKH SYFVGFFVYT VFNLALVFSS VYIVTNFAPA AAGSGIPEIK GYLNGVDTPG ILLLRTLVGK IFGSIGSVGG GLALGKEGPL
201: VHTGACIASL LGQGGSAKYH LNSRWVRIFE SDRDRRDLVT CGCAAGVAAA FRAPVGGVLF ALEEVTSWWR SHLMWRVFFT SAVVAVVVRS AMNWCNSGKC
301: GHFGAGGFII WDISGGQEDY SYQELFPMAI IGVIGGLLGA LFNQLTLYIT KWRRTYLHKK GKRVQIFEAC LISLVTSTIS FVLPLLRKCS PCPQLETNSG
401: IECPHPPGTD GNFVNFYCSK DREYNDLATI FFNTQDDAIR NLFSAKTFHE YSAQSLITFL VMFYSLAVVT FGTAVPAGQF VPGIMIGSTY GRLVGMFVVK
501: FYKKLNIEEG TYALLGAASF LGGSMRMTVS LCVIMVEITN NLQLLPLIML VLLVSKAVGD FFNEGLYEEQ ARLRGIPLLD SRPKQVMRNM TAKDACKNQK
601: VVCLPRVSRI VDIVSVLRTN KHNGFPVVDR GQNGEPLVIG LILRSHLLVL LQAKVDFQNS PFPCGPGVLN RHNFSDFVKP ASSKGKSIDD IHLTEDELGL
701: YLDLAPFLNP SPYIVPEDMS LAKVYNLFRQ LGLRHIFVVP RPSRVVGLIT RKDLLLEEHS NNVMAELQST SVRGLLNGKM LGGNVHLERP LLDNLVIE
001: MLSNHLQNGI ESDNLLWSRV PESDDTSTDD ITLLNSHRDG DGGVNSLDYE VIENYAYREE QAHRGKLYVG YYVAVKWFFS LLIGIGTGLA AVFINLSVEN
101: FAGWKFALTF AIIQKSYFAG FIVYLLINLV LVFSSAYIIT QFAPAAAGSG IPEIKGYLNG IDIPGTLLFR TLIGKIFGSI GSVGGGLALG KEGPLVHTGA
201: CIASLLGQGG STKYHLNSRW PQLFKSDRDR RDLVTCGCAA GVAAAFRAPV GGVLFALEEV TSWWRSQLMW RVFFTSAIVA VVVRTAMGWC KSGICGHFGG
301: GGFIIWDVSD GQDDYYFKEL LPMAVIGVIG GLLGALFNQL TLYMTSWRRN SLHKKGNRVK IIEACIISCI TSAISFGLPL LRKCSPCPES VPDSGIECPR
401: PPGMYGNYVN FFCKTDNEYN DLATIFFNTQ DDAIRNLFSA KTMREFSAQS LLTFLAMFYT LAVVTFGTAV PAGQFVPGIM IGSTYGRLVG MFVVRFYKKL
501: NIEEGTYALL GAASFLGGSM RMTVSLCVIM VEITNNLKLL PLIMLVLLIS KAVGDAFNEG LYEVQARLKG IPLLESRPKY HMRQMIAKEA CQSQKVISLP
601: RVIRVADVAS ILGSNKHNGF PVIDHTRSGE TLVIGLVLRS HLLVLLQSKV DFQHSPLPCD PSARNIRHSF SEFAKPVSSK GLCIEDIHLT SDDLEMYIDL
701: APFLNPSPYV VPEDMSLTKV YNLFRQLGLR HLFVVPRPSR VIGLITRKDL LIEENGESSA VELQQSTSVR GRYSETATRM DAARPLLDDL LG
101: FAGWKFALTF AIIQKSYFAG FIVYLLINLV LVFSSAYIIT QFAPAAAGSG IPEIKGYLNG IDIPGTLLFR TLIGKIFGSI GSVGGGLALG KEGPLVHTGA
201: CIASLLGQGG STKYHLNSRW PQLFKSDRDR RDLVTCGCAA GVAAAFRAPV GGVLFALEEV TSWWRSQLMW RVFFTSAIVA VVVRTAMGWC KSGICGHFGG
301: GGFIIWDVSD GQDDYYFKEL LPMAVIGVIG GLLGALFNQL TLYMTSWRRN SLHKKGNRVK IIEACIISCI TSAISFGLPL LRKCSPCPES VPDSGIECPR
401: PPGMYGNYVN FFCKTDNEYN DLATIFFNTQ DDAIRNLFSA KTMREFSAQS LLTFLAMFYT LAVVTFGTAV PAGQFVPGIM IGSTYGRLVG MFVVRFYKKL
501: NIEEGTYALL GAASFLGGSM RMTVSLCVIM VEITNNLKLL PLIMLVLLIS KAVGDAFNEG LYEVQARLKG IPLLESRPKY HMRQMIAKEA CQSQKVISLP
601: RVIRVADVAS ILGSNKHNGF PVIDHTRSGE TLVIGLVLRS HLLVLLQSKV DFQHSPLPCD PSARNIRHSF SEFAKPVSSK GLCIEDIHLT SDDLEMYIDL
701: APFLNPSPYV VPEDMSLTKV YNLFRQLGLR HLFVVPRPSR VIGLITRKDL LIEENGESSA VELQQSTSVR GRYSETATRM DAARPLLDDL LG
Arabidopsis Description
CLC-DChloride channel protein CLC-d [Source:UniProtKB/Swiss-Prot;Acc:P92943]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.