Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 5
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH77868 | Soybean | plasma membrane | 85.62 | 85.52 |
| KRH27622 | Soybean | plasma membrane | 85.38 | 85.27 |
| Solyc09g075800.2.1 | Tomato | plasma membrane | 82.5 | 83.23 |
| Bra009891.1-P | Field mustard | plasma membrane | 82.25 | 83.08 |
| CDX88226 | Canola | plasma membrane | 82.25 | 83.08 |
| AT5G26240.1 | Thale cress | plasma membrane | 82.12 | 82.95 |
| CDY52633 | Canola | plasma membrane | 82.62 | 82.42 |
| GSMUA_Achr4P06890_001 | Banana | plasma membrane | 69.88 | 82.21 |
| HORVU4Hr1G005590.4 | Barley | plasma membrane | 21.0 | 78.14 |
| Zm00001d033597_P004 | Maize | plasma membrane | 76.12 | 77.98 |
| TraesCS4D01G033500.1 | Wheat | plasma membrane | 78.12 | 77.83 |
| TraesCS4A01G277600.2 | Wheat | plasma membrane | 78.0 | 77.42 |
| TraesCS4B01G035500.1 | Wheat | plasma membrane | 77.88 | 77.3 |
| KXG37802 | Sorghum | plasma membrane | 76.62 | 76.82 |
| HORVU0Hr1G040330.16 | Barley | plasma membrane | 55.5 | 75.51 |
| GSMUA_Achr4P06880_001 | Banana | cytosol | 8.5 | 73.91 |
| Os03t0695700-01 | Rice | extracellular, plasma membrane | 23.75 | 70.63 |
| GSMUA_Achr7P27080_001 | Banana | mitochondrion, plasma membrane | 21.5 | 60.99 |
| VIT_07s0130g00400.t01 | Wine grape | cytosol | 44.62 | 45.77 |
| VIT_11s0118g00220.t01 | Wine grape | plasma membrane | 43.88 | 45.47 |
| VIT_12s0035g01720.t01 | Wine grape | plasma membrane | 43.38 | 44.66 |
| VIT_14s0068g02190.t01 | Wine grape | plasma membrane | 42.62 | 43.22 |
| VIT_00s0316g00020.t01 | Wine grape | cytosol | 3.88 | 36.9 |
| VIT_14s0068g02330.t01 | Wine grape | cytosol, extracellular | 3.75 | 36.59 |
Protein Annotations
| Gene3D:1.10.3080.10 | EntrezGene:100261408 | wikigene:100261408 | MapMan:24.2.16 | Gene3D:3.10.580.10 | ProteinID:ADK66984 |
| ProteinID:ADK66984.1 | ProteinID:CBI26223 | ProteinID:CBI26223.3 | InterPro:CBS_dom | InterPro:Cl-channel_core | InterPro:Cl-channel_volt-gated |
| InterPro:Cl_channel_pln | UniProt:D7T6V2 | EMBL:FN595749 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005216 |
| GO:GO:0005247 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 |
| GO:GO:0005802 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0006821 | GO:GO:0008150 | GO:GO:0009653 |
| GO:GO:0009826 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016049 |
| GO:GO:0034220 | GO:GO:0040007 | GO:GO:0055085 | GO:GO:1902476 | EMBL:HM369804 | InterPro:IPR000644 |
| InterPro:IPR014743 | EntrezGene:LOC100261408 | wikigene:LOC100261408 | PFAM:PF00571 | PFAM:PF00654 | PRINTS:PR00762 |
| PRINTS:PR01120 | PFscan:PS51371 | PANTHER:PTHR11689 | PANTHER:PTHR11689:SF92 | SMART:SM00116 | SUPFAM:SSF54631 |
| SUPFAM:SSF81340 | TMHMM:TMhelix | UniParc:UPI0001BE2CB6 | ArrayExpress:VIT_05s0020g03090 | EnsemblPlantsGene:VIT_05s0020g03090 | EnsemblPlants:VIT_05s0020g03090.t01 |
| RefSeq:XP_010649611.1 | SEG:seg | : | : | : | : |
Description
Chloride channel protein [Source:UniProtKB/TrEMBL;Acc:D7T6V2]
Coordinates
chr5:+:4831139..4846609
Molecular Weight (calculated)
88453.7 Da
IEP (calculated)
8.481
GRAVY (calculated)
0.159
Length
800 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSNHLQNGI ETARLVWSRL PNSDDEALDE VGLSKKSDGS RSESLDYEVI ENNAYREEQA QRRKLMVGYY VGVKWFFALL IGIGTGLAAV FINISVENFA
101: GWKFQLTFSI IQKSYVAGFL VYILFNLLLV FSSVYIVTQF APAAAGSGIP EIKGYLNGVD THGILLFRTL IGKIFGSIGS VGGGLALGKE GPLVHTGACI
201: ASLFGQGGST KYHLSSRWLQ VFKSDRDRRD LVTCGCAAGV AAAFRAPVGG VLFALEEVTS WWRSQLMWRV FFTSAVVAVV VRTAMGWCKS GKCGHFGSGG
301: FIIWDISDGQ EDYSFEELLP MAIIGVIGGL LGALFNQLTI YITYWRRNYL HKKGSRVKMI EVCLVSLITS VISFGLPLLR KCSPCPEVEL NSGIECPRPP
401: GMYGNYVNFY CDKDNEYNDL ATIFFNTQDD AIRNLFSAKT IHEYSAQSLL TFLVMFYSLA VLTFGTAVPA GQFVPGIMIG STYGRLVGMF VVNFYKKLNI
501: EEGTYALLGA ASFLGGSMRM TVSLCVIMVE ITNNLKLLPL IMLVLLISKA VGDAFNEGLY EEQARLRGIP LLESRPKYQM RKMTAKEACG NKKVVYFPRV
601: VKVADVVSIL RSNEHNGFPV IDHTRNGESL VIGLMLRSHL LVLLQSKVDF QHSPLPSDPR GGGKPIRHNF TEFAKPVSSK GISIDDIHLS SDDLEMYIDL
701: APFLNPSPYV VPEDMSLSKV YNLFRQLGLR HILVVPRASR VIGLITRKDL LIEDNENSET VELQSTSVRA RRQDRKASVR EADAEHPLLN GLLVKGYSSS
101: GWKFQLTFSI IQKSYVAGFL VYILFNLLLV FSSVYIVTQF APAAAGSGIP EIKGYLNGVD THGILLFRTL IGKIFGSIGS VGGGLALGKE GPLVHTGACI
201: ASLFGQGGST KYHLSSRWLQ VFKSDRDRRD LVTCGCAAGV AAAFRAPVGG VLFALEEVTS WWRSQLMWRV FFTSAVVAVV VRTAMGWCKS GKCGHFGSGG
301: FIIWDISDGQ EDYSFEELLP MAIIGVIGGL LGALFNQLTI YITYWRRNYL HKKGSRVKMI EVCLVSLITS VISFGLPLLR KCSPCPEVEL NSGIECPRPP
401: GMYGNYVNFY CDKDNEYNDL ATIFFNTQDD AIRNLFSAKT IHEYSAQSLL TFLVMFYSLA VLTFGTAVPA GQFVPGIMIG STYGRLVGMF VVNFYKKLNI
501: EEGTYALLGA ASFLGGSMRM TVSLCVIMVE ITNNLKLLPL IMLVLLISKA VGDAFNEGLY EEQARLRGIP LLESRPKYQM RKMTAKEACG NKKVVYFPRV
601: VKVADVVSIL RSNEHNGFPV IDHTRNGESL VIGLMLRSHL LVLLQSKVDF QHSPLPSDPR GGGKPIRHNF TEFAKPVSSK GISIDDIHLS SDDLEMYIDL
701: APFLNPSPYV VPEDMSLSKV YNLFRQLGLR HILVVPRASR VIGLITRKDL LIEDNENSET VELQSTSVRA RRQDRKASVR EADAEHPLLN GLLVKGYSSS
001: MLSNHLQNGI ESDNLLWSRV PESDDTSTDD ITLLNSHRDG DGGVNSLDYE VIENYAYREE QAHRGKLYVG YYVAVKWFFS LLIGIGTGLA AVFINLSVEN
101: FAGWKFALTF AIIQKSYFAG FIVYLLINLV LVFSSAYIIT QFAPAAAGSG IPEIKGYLNG IDIPGTLLFR TLIGKIFGSI GSVGGGLALG KEGPLVHTGA
201: CIASLLGQGG STKYHLNSRW PQLFKSDRDR RDLVTCGCAA GVAAAFRAPV GGVLFALEEV TSWWRSQLMW RVFFTSAIVA VVVRTAMGWC KSGICGHFGG
301: GGFIIWDVSD GQDDYYFKEL LPMAVIGVIG GLLGALFNQL TLYMTSWRRN SLHKKGNRVK IIEACIISCI TSAISFGLPL LRKCSPCPES VPDSGIECPR
401: PPGMYGNYVN FFCKTDNEYN DLATIFFNTQ DDAIRNLFSA KTMREFSAQS LLTFLAMFYT LAVVTFGTAV PAGQFVPGIM IGSTYGRLVG MFVVRFYKKL
501: NIEEGTYALL GAASFLGGSM RMTVSLCVIM VEITNNLKLL PLIMLVLLIS KAVGDAFNEG LYEVQARLKG IPLLESRPKY HMRQMIAKEA CQSQKVISLP
601: RVIRVADVAS ILGSNKHNGF PVIDHTRSGE TLVIGLVLRS HLLVLLQSKV DFQHSPLPCD PSARNIRHSF SEFAKPVSSK GLCIEDIHLT SDDLEMYIDL
701: APFLNPSPYV VPEDMSLTKV YNLFRQLGLR HLFVVPRPSR VIGLITRKDL LIEENGESSA VELQQSTSVR GRYSETATRM DAARPLLDDL LG
101: FAGWKFALTF AIIQKSYFAG FIVYLLINLV LVFSSAYIIT QFAPAAAGSG IPEIKGYLNG IDIPGTLLFR TLIGKIFGSI GSVGGGLALG KEGPLVHTGA
201: CIASLLGQGG STKYHLNSRW PQLFKSDRDR RDLVTCGCAA GVAAAFRAPV GGVLFALEEV TSWWRSQLMW RVFFTSAIVA VVVRTAMGWC KSGICGHFGG
301: GGFIIWDVSD GQDDYYFKEL LPMAVIGVIG GLLGALFNQL TLYMTSWRRN SLHKKGNRVK IIEACIISCI TSAISFGLPL LRKCSPCPES VPDSGIECPR
401: PPGMYGNYVN FFCKTDNEYN DLATIFFNTQ DDAIRNLFSA KTMREFSAQS LLTFLAMFYT LAVVTFGTAV PAGQFVPGIM IGSTYGRLVG MFVVRFYKKL
501: NIEEGTYALL GAASFLGGSM RMTVSLCVIM VEITNNLKLL PLIMLVLLIS KAVGDAFNEG LYEVQARLKG IPLLESRPKY HMRQMIAKEA CQSQKVISLP
601: RVIRVADVAS ILGSNKHNGF PVIDHTRSGE TLVIGLVLRS HLLVLLQSKV DFQHSPLPCD PSARNIRHSF SEFAKPVSSK GLCIEDIHLT SDDLEMYIDL
701: APFLNPSPYV VPEDMSLTKV YNLFRQLGLR HLFVVPRPSR VIGLITRKDL LIEENGESSA VELQQSTSVR GRYSETATRM DAARPLLDDL LG
Arabidopsis Description
CLC-DChloride channel protein CLC-d [Source:UniProtKB/Swiss-Prot;Acc:P92943]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.