Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 5
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G33280.1 | Thale cress | plasma membrane | 76.55 | 77.25 |
| PGSC0003DMT400078919 | Potato | plasma membrane | 76.55 | 77.05 |
| Bra038948.1-P | Field mustard | plasma membrane | 75.78 | 76.57 |
| CDY47559 | Canola | plasma membrane | 75.65 | 76.44 |
| CDY12393 | Canola | plasma membrane | 75.52 | 76.31 |
| KRH20183 | Soybean | plasma membrane | 74.87 | 75.56 |
| Solyc07g007690.2.1 | Tomato | plasma membrane | 76.68 | 75.13 |
| GSMUA_Achr5P23490_001 | Banana | plasma membrane | 71.89 | 70.61 |
| GSMUA_Achr6P02920_001 | Banana | plasma membrane | 66.97 | 68.39 |
| Zm00001d002091_P002 | Maize | plasma membrane | 65.8 | 67.02 |
| Zm00001d039812_P001 | Maize | plasma membrane | 20.98 | 66.12 |
| EES11540 | Sorghum | plasma membrane | 68.65 | 65.11 |
| GSMUA_Achr3P13250_001 | Banana | cytosol, peroxisome, plasma membrane | 64.77 | 64.18 |
| TraesCS2D01G519000.2 | Wheat | plasma membrane | 67.36 | 63.57 |
| TraesCS2B01G546000.1 | Wheat | plasma membrane | 67.23 | 63.53 |
| TraesCS2A01G517500.3 | Wheat | plasma membrane | 67.62 | 63.5 |
| Os08t0300300-01 | Rice | plasma membrane | 64.25 | 62.31 |
| VIT_12s0035g01720.t01 | Wine grape | plasma membrane | 62.05 | 61.65 |
| VIT_07s0130g00400.t01 | Wine grape | cytosol | 61.79 | 61.15 |
| Zm00001d015702_P001 | Maize | plasma membrane | 51.3 | 61.11 |
| GSMUA_Achr1P26050_001 | Banana | plasma membrane | 61.01 | 61.01 |
| TraesCS5A01G449500.2 | Wheat | plasma membrane | 59.46 | 60.96 |
| EES06435 | Sorghum | plasma membrane | 62.31 | 60.66 |
| TraesCS5D01G456000.1 | Wheat | plasma membrane | 61.66 | 60.1 |
| TraesCS5B01G457100.1 | Wheat | plasma membrane | 61.53 | 59.97 |
| VIT_14s0068g02190.t01 | Wine grape | plasma membrane | 54.53 | 53.36 |
| HORVU5Hr1G107380.2 | Barley | plastid | 55.96 | 51.12 |
| Zm00001d015700_P001 | Maize | plasma membrane | 14.51 | 50.91 |
| VIT_05s0020g03090.t01 | Wine grape | plasma membrane | 45.47 | 43.88 |
| VIT_00s0316g00020.t01 | Wine grape | cytosol | 4.27 | 39.29 |
| VIT_14s0068g02330.t01 | Wine grape | cytosol, extracellular | 4.02 | 37.8 |
Protein Annotations
| EntrezGene:100255837 | wikigene:100255837 | MapMan:24.2.16 | Gene3D:3.10.580.10 | ProteinID:ADK66983 | ProteinID:ADK66983.1 |
| ProteinID:CBI25542 | ProteinID:CBI25542.3 | InterPro:CBS_dom | InterPro:Cl-channel_core | InterPro:Cl-channel_volt-gated | InterPro:Cl_channel_pln |
| UniProt:D7T4W0 | EMBL:FN595515 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005216 | GO:GO:0005247 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0006821 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0034220 | GO:GO:0055085 | GO:GO:1902476 | EMBL:HM369803 | InterPro:IPR000644 |
| InterPro:IPR014743 | EntrezGene:LOC100255837 | wikigene:LOC100255837 | PFAM:PF00571 | PFAM:PF00654 | PRINTS:PR00762 |
| PRINTS:PR01120 | PFscan:PS51371 | PANTHER:PTHR11689 | PANTHER:PTHR11689:SF66 | SUPFAM:SSF54631 | SUPFAM:SSF81340 |
| TMHMM:TMhelix | UniParc:UPI00015CC7DC | ArrayExpress:VIT_11s0118g00220 | EnsemblPlantsGene:VIT_11s0118g00220 | EnsemblPlants:VIT_11s0118g00220.t01 | unigene:Vvi.19561 |
| RefSeq:XP_010656505.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr11:-:5810476..5819965
Molecular Weight (calculated)
85256.0 Da
IEP (calculated)
8.543
GRAVY (calculated)
0.446
Length
772 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAQPNADEE SQAQPLLDPS LHRSLSNVTS QVAIVGSNVC PIESLDYEIY ENDFFKQDWR SRGKVQIFQY IFVKWLLCFL IGLIVSLIGF CNNLAVENLA
101: GVKFVITSNM MLVKRYGMAF LVFFSSNFVL TLFASIITAF IAPAAAGSGI PEVKAYLNGV DAPGIFTLKT LLVKIVGSIT AVSSSLLIGK AGPMVHTGAC
201: VAALLGQGGS RKYGLTWRWL RYFKNDRDRR DFVTCGSAAG IAASFRAPVG GVLFSLEEMA SWWRSALLWR CFFTTAVVAI MLRALIDVCL SGKCGLFGTG
301: GLIMFDVTSQ NTTYHIKDVP PVLVLGVIGG LLGSLYNFLL EKVLRIYSYI YGKKPIYKII LACSISVFTS CLLFGLPWLA SCQPCPIDAS EACPTIGRSG
401: NYKKFQCPPG HYNDLASLIF NTNDDAIKNL FSKDTDSEFQ YSSILIFFAT CFFLSIFSYG IVAPAGLFVP VIVTGASYGR FVGMLVGSHS NLNHGLFAVL
501: GAASLLGGSM RMTVSLCVII LELTNNLLLL PLIMVVLLVS KTVADAFNGN VYDIIMKLKG FPYLEAHAEP YMRQLTVEDV VTGPLQLFNV IEKVENIVHV
601: LRTTGHHGFP VIDERSHSES PVLFGLVLRA HLIVLLRKKA FLTTAVRADS DAFRHFSAMD FTKRGSGNGD KIEDIELTEE EMEMFIDLHP FCNSSPYTVV
701: ETMSLAKALI LFREVGLRHL LVIPKISNRS PVVGILTRHD FMPEHILGVH PLLVRSRWKR IRFQLPRFLK LF
101: GVKFVITSNM MLVKRYGMAF LVFFSSNFVL TLFASIITAF IAPAAAGSGI PEVKAYLNGV DAPGIFTLKT LLVKIVGSIT AVSSSLLIGK AGPMVHTGAC
201: VAALLGQGGS RKYGLTWRWL RYFKNDRDRR DFVTCGSAAG IAASFRAPVG GVLFSLEEMA SWWRSALLWR CFFTTAVVAI MLRALIDVCL SGKCGLFGTG
301: GLIMFDVTSQ NTTYHIKDVP PVLVLGVIGG LLGSLYNFLL EKVLRIYSYI YGKKPIYKII LACSISVFTS CLLFGLPWLA SCQPCPIDAS EACPTIGRSG
401: NYKKFQCPPG HYNDLASLIF NTNDDAIKNL FSKDTDSEFQ YSSILIFFAT CFFLSIFSYG IVAPAGLFVP VIVTGASYGR FVGMLVGSHS NLNHGLFAVL
501: GAASLLGGSM RMTVSLCVII LELTNNLLLL PLIMVVLLVS KTVADAFNGN VYDIIMKLKG FPYLEAHAEP YMRQLTVEDV VTGPLQLFNV IEKVENIVHV
601: LRTTGHHGFP VIDERSHSES PVLFGLVLRA HLIVLLRKKA FLTTAVRADS DAFRHFSAMD FTKRGSGNGD KIEDIELTEE EMEMFIDLHP FCNSSPYTVV
701: ETMSLAKALI LFREVGLRHL LVIPKISNRS PVVGILTRHD FMPEHILGVH PLLVRSRWKR IRFQLPRFLK LF
001: MPNSTTEDSV AVPLLPSLRR ATNSTSQVAI VGANVCPIES LDYEIAENDF FKQDWRGRSK VEIFQYVFMK WLLCFCIGII VSLIGFANNL AVENLAGVKF
101: VVTSNMMIAG RFAMGFVVFS VTNLILTLFA SVITAFVAPA AAGSGIPEVK AYLNGVDAPE IFSLRTLIIK IIGNISAVSA SLLIGKAGPM VHTGACVASI
201: LGQGGSKRYR LTWRWLRFFK NDRDRRDLVT CGAAAGIAAS FRAPVGGVLF ALEEMSSWWR SALLWRIFFS TAVVAIVLRA LIDVCLSGKC GLFGKGGLIM
301: FDVYSENASY HLGDVLPVLL LGVVGGILGS LYNFLLDKVL RAYNYIYEKG VTWKILLACA ISIFTSCLLF GLPFLASCQP CPVDALEECP TIGRSGNFKK
401: YQCPPGHYND LASLIFNTND DAIKNLFSKN TDFEFHYFSV LVFFVTCFFL SIFSYGIVAP AGLFVPVIVT GASYGRFVGM LLGSNSNLNH GLFAVLGAAS
501: FLGGTMRMTV STCVILLELT NNLLLLPMMM VVLLISKTVA DGFNANIYNL IMKLKGFPYL YSHAEPYMRQ LLVGDVVTGP LQVFNGIEKV ETIVHVLKTT
601: NHNGFPVVDG PPLAAAPVLH GLILRAHILT LLKKRVFMPS PVACDSNTLS QFKAEEFAKK GSGRSDKIED VELSEEELNM YLDLHPFSNA SPYTVVETMS
701: LAKALILFRE VGIRHLLVIP KTSNRPPVVG ILTRHDFMPE HILGLHPSVS RSKWKRLRIR LPFFS
101: VVTSNMMIAG RFAMGFVVFS VTNLILTLFA SVITAFVAPA AAGSGIPEVK AYLNGVDAPE IFSLRTLIIK IIGNISAVSA SLLIGKAGPM VHTGACVASI
201: LGQGGSKRYR LTWRWLRFFK NDRDRRDLVT CGAAAGIAAS FRAPVGGVLF ALEEMSSWWR SALLWRIFFS TAVVAIVLRA LIDVCLSGKC GLFGKGGLIM
301: FDVYSENASY HLGDVLPVLL LGVVGGILGS LYNFLLDKVL RAYNYIYEKG VTWKILLACA ISIFTSCLLF GLPFLASCQP CPVDALEECP TIGRSGNFKK
401: YQCPPGHYND LASLIFNTND DAIKNLFSKN TDFEFHYFSV LVFFVTCFFL SIFSYGIVAP AGLFVPVIVT GASYGRFVGM LLGSNSNLNH GLFAVLGAAS
501: FLGGTMRMTV STCVILLELT NNLLLLPMMM VVLLISKTVA DGFNANIYNL IMKLKGFPYL YSHAEPYMRQ LLVGDVVTGP LQVFNGIEKV ETIVHVLKTT
601: NHNGFPVVDG PPLAAAPVLH GLILRAHILT LLKKRVFMPS PVACDSNTLS QFKAEEFAKK GSGRSDKIED VELSEEELNM YLDLHPFSNA SPYTVVETMS
701: LAKALILFRE VGIRHLLVIP KTSNRPPVVG ILTRHDFMPE HILGLHPSVS RSKWKRLRIR LPFFS
Arabidopsis Description
CLC-GPutative chloride channel-like protein CLC-g [Source:UniProtKB/Swiss-Prot;Acc:P60300]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.