Factsheet for Zm00001d015702_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plasma membrane, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES06435	Sorghum	plasma membrane	93.36	76.29
Os08t0300300-01	Rice	plasma membrane	88.43	71.98
TraesCS5D01G456000.1	Wheat	plasma membrane	83.18	68.06
TraesCS5B01G457100.1	Wheat	plasma membrane	83.02	67.93
TraesCS5A01G449500.2	Wheat	plasma membrane	78.24	67.33
HORVU5Hr1G107380.2	Barley	plastid	81.94	62.84
Zm00001d039812_P001	Maize	plasma membrane	23.15	61.22
Zm00001d002091_P002	Maize	plasma membrane	64.66	55.28
GSMUA_Achr3P13250_001	Banana	cytosol, peroxisome, plasma membrane	65.28	54.3
GSMUA_Achr1P26050_001	Banana	plasma membrane	63.12	52.98
PGSC0003DMT400078919	Potato	plasma membrane	61.73	52.15
AT5G33280.1	Thale cress	plasma membrane	60.96	51.63
VIT_11s0118g00220.t01	Wine grape	plasma membrane	61.11	51.3
Solyc07g007690.2.1	Tomato	plasma membrane	62.19	51.14
KRH20183	Soybean	plasma membrane	59.88	50.72
CDY12393	Canola	plasma membrane	59.57	50.52
Bra038948.1-P	Field mustard	plasma membrane	59.41	50.39
CDY47559	Canola	plasma membrane	59.41	50.39
Zm00001d025474_P003	Maize	plasma membrane	58.49	47.67
Zm00001d016855_P002	Maize	plasma membrane	58.18	45.53
Zm00001d042651_P001	Maize	plasma membrane	54.63	44.58
Zm00001d046919_P001	Maize	plasma membrane	49.54	40.07
Zm00001d033597_P004	Maize	plasma membrane	41.98	34.83
Zm00001d003594_P001	Maize	plasma membrane	13.89	31.14
Zm00001d015700_P001	Maize	plasma membrane	4.94	14.55

Protein Annotations

Gene3D:1.10.3080.10	MapMan:24.2.16	Gene3D:3.10.580.10	UniProt:A0A1D6H396	ProteinID:AQK69308.1	InterPro:CBS_dom
InterPro:Cl-channel_core	InterPro:Cl-channel_volt-gated	InterPro:Cl_channel_pln	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216
GO:GO:0005247	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006821	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0055085	GO:GO:1902476	InterPro:IPR000644
InterPro:IPR014743	PFAM:PF00571	PFAM:PF00654	PRINTS:PR00762	PRINTS:PR01120	PFscan:PS51371
PANTHER:PTHR11689	PANTHER:PTHR11689:SF97	SMART:SM00116	SUPFAM:SSF54631	SUPFAM:SSF81340	TMHMM:TMhelix
UniParc:UPI0002212E00	EnsemblPlantsGene:Zm00001d015702	EnsemblPlants:Zm00001d015702_P001	EnsemblPlants:Zm00001d015702_T001	SEG:seg	:

Description

Putative chloride channel-like protein CLC-g

Coordinates

chr5:+:108882599..108887800

Molecular Weight (calculated)

71067.7 Da

IEP (calculated)

9.197

GRAVY (calculated)

0.374

Length

648 amino acids

Sequence
(BLAST)

001: MKCWPSWYTA SQVAITHHQI IVVNMLCKHD DVQVVGNIAA VSSSLHVGKA GPMVHTGACI AAIFGQGGSR KYGLTCRWLR YFKNDRDRRD LVTIGAGAGV
101: AAAFRAPVGG VLFALESLSS WWRSALIWRS FFTTAVVAVV LRLFIELCGT GRCGMFGRGG LIMYDVSTVF DDLMTYHLKD IPTVILIGVT GALLGGLYNF
201: LMIKVLRLYN AINERGGAHK LLLAATVSIV TSCCVFGLPW LAPCRPCPTT GPLSSPDGTC HALNRFRRFH CPKGHYNDLA SLFLNINDDA IRNLYSTGTN
301: DVYHPVSMVI FFVASYALGV LSYGVVAPSG LFVPIILTGA TYGRLVAMLL GGRSGLDHGL VAILGSASFL GGTLRMTVSV CVIILELTNN LLLLPLVMLV
401: LLISKTVADS FNSSIYDLIL RLKGLPHLDG HAEPYMRQLA VGDVVAGPLR SFGGVEKVGN VVHTLRTTGH HAFPVVDEPP FSPAPVLYGL VLRAHLLVLL
501: KKREFLVAPE RCPKEYVAER FQAEDFDKRG SGKQDTIADV VLSPEEMEMY VDLHPFTNTS PYTVVETMSL AKALVLFREV GLRHLLVVPK ACDRSPVVGI
601: LTRHDFMPEH ILELHPVLLR SRWKRLRWQR GAMAKYFRSL IVWVANSG

Best Arabidopsis Sequence Match ( AT3G27170.1 )
(BLAST)

001: MVEEDLNQIG GNSNYNGEGG DPESNTLNQP LVKANRTLSS TPLALVGAKV SHIESLDYEI NENDLFKHDW RKRSKAQVLQ YVFLKWTLAC LVGLFTGLIA
101: TLINLAVENI AGYKLLAVGH FLTQERYVTG LMVLVGANLG LTLVASVLCV CFAPTAAGPG IPEIKAYLNG VDTPNMFGAT TMIVKIVGSI GAVAAGLDLG
201: KEGPLVHIGS CIASLLGQGG TDNHRIKWRW LRYFNNDRDR RDLITCGSAA GVCAAFRSPV GGVLFALEEV ATWWRSALLW RTFFSTAVVV VVLREFIEIC
301: NSGKCGLFGK GGLIMFDVSH VTYTYHVTDI IPVMLIGVIG GILGSLYNHL LHKVLRLYNL INEKGKIHKV LLSLTVSLFT SVCLYGLPFL AKCKPCDPSI
401: DEICPTNGRS GNFKQFHCPK GYYNDLATLL LTTNDDAVRN LFSSNTPNEF GMGSLWIFFV LYCILGLFTF GIATPSGLFL PIILMGAAYG RMLGAAMGSY
501: TSIDQGLYAV LGAAALMAGS MRMTVSLCVI FLELTNNLLL LPITMIVLLI AKTVGDSFNP SIYDIILHLK GLPFLEANPE PWMRNLTVGE LGDAKPPVVT
601: LQGVEKVSNI VDVLKNTTHN AFPVLDEAEV PQVGLATGAT ELHGLILRAH LVKVLKKRWF LTEKRRTEEW EVREKFPWDE LAEREDNFDD VAITSAEMEM
701: YVDLHPLTNT TPYTVMENMS VAKALVLFRQ VGLRHLLIVP KIQASGMCPV VGILTRQDLR AYNILQAFPL LEKSKGGKTH

Arabidopsis Description

CLC-BChloride channel protein [Source:UniProtKB/TrEMBL;Acc:A0A178VKG6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.