Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 5
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES06435 | Sorghum | plasma membrane | 88.82 | 89.16 |
| Zm00001d015702_P001 | Maize | plasma membrane | 71.98 | 88.43 |
| TraesCS5B01G457100.1 | Wheat | plasma membrane | 87.44 | 87.88 |
| TraesCS5D01G456000.1 | Wheat | plasma membrane | 87.06 | 87.5 |
| TraesCS5A01G449500.2 | Wheat | plasma membrane | 82.54 | 87.25 |
| Zm00001d015700_P001 | Maize | plasma membrane | 21.36 | 77.27 |
| HORVU5Hr1G107380.2 | Barley | plastid | 76.51 | 72.07 |
| GSMUA_Achr3P13250_001 | Banana | cytosol, peroxisome, plasma membrane | 68.72 | 70.22 |
| GSMUA_Achr1P26050_001 | Banana | plasma membrane | 65.58 | 67.62 |
| AT5G33280.1 | Thale cress | plasma membrane | 62.44 | 64.97 |
| PGSC0003DMT400078919 | Potato | plasma membrane | 62.06 | 64.41 |
| VIT_11s0118g00220.t01 | Wine grape | plasma membrane | 62.31 | 64.25 |
| Bra038948.1-P | Field mustard | plasma membrane | 61.31 | 63.87 |
| CDY12393 | Canola | plasma membrane | 61.31 | 63.87 |
| CDY47559 | Canola | plasma membrane | 61.18 | 63.74 |
| Solyc07g007690.2.1 | Tomato | plasma membrane | 62.06 | 62.69 |
| KRH20183 | Soybean | plasma membrane | 59.8 | 62.22 |
| Os02t0558100-02 | Rice | plasma membrane | 59.05 | 58.46 |
| Os01t0876100-00 | Rice | plasma membrane | 55.15 | 50.34 |
| Os03t0695700-01 | Rice | extracellular, plasma membrane | 13.07 | 38.66 |
| Os12t0438600-01 | Rice | plasma membrane | 6.03 | 31.58 |
| Os03t0695600-01 | Rice | cytosol | 0.75 | 2.83 |
Protein Annotations
| Gene3D:1.10.3080.10 | MapMan:24.2.16 | Gene3D:3.10.580.10 | EntrezGene:4345218 | ProteinID:AAQ56538.1 | ProteinID:AAQ56565.1 |
| EMBL:AK066375 | ProteinID:BAC92420.1 | ProteinID:BAT04806.1 | InterPro:CBS_dom | InterPro:Cl-channel_core | InterPro:Cl-channel_volt-gated |
| InterPro:Cl_channel_pln | ProteinID:EAZ42255.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005247 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0006810 | GO:GO:0006811 |
| GO:GO:0006821 | GO:GO:0008150 | GO:GO:0009671 | GO:GO:0009705 | GO:GO:0015706 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | GO:GO:1902476 | GO:GO:1902600 | InterPro:IPR000644 | InterPro:IPR014743 |
| EnsemblPlantsGene:Os08g0300300 | EnsemblPlants:Os08t0300300-01 | PFAM:PF00571 | PFAM:PF00654 | PRINTS:PR00762 | PRINTS:PR01120 |
| PFscan:PS51371 | PANTHER:PTHR11689 | PANTHER:PTHR11689:SF97 | UniProt:Q6ZDC2 | SMART:SM00116 | SUPFAM:SSF54631 |
| SUPFAM:SSF81340 | TMHMM:TMhelix | UniParc:UPI00001D1B57 | RefSeq:XP_015650515.1 | SEG:seg | : |
Description
CYSTATHIONINE B-SYNTHASE DOMAIN CONTAINING CHLORIDE CHANNEL PROTEIN 6Similar to Chloride channel-like protein Osclc. (Os08t0300300-01)
Coordinates
chr8:+:12350726..12356984
Molecular Weight (calculated)
86674.2 Da
IEP (calculated)
8.676
GRAVY (calculated)
0.336
Length
796 amino acids
Sequence
(BLAST)
(BLAST)
001: MACTAPREED LLMEEDEHRP PLNRALLHRS ATNNTSQVAM VGSNPCPIES LDYEIIENDL FDQNWRSRGK ADQVRYVVLK WTFCFAIGII TGIAGFVINL
101: AVENVAGLKH TAVSALMESS SYWTAFWLFA GTNLALLLFA SSITAFVSPA AGGSGIPEVK AYLNGVDAPN IFSLRTLAVK IIGNIAAVSS SLHVGKAGPM
201: VHTGACIAAI FGQGGSRKYG LTCRWLRYFK NDRDRRDLVT IGAGAGVTAA FRAPVGGVLF ALESLSSWWR SALIWRSFFT TAVVAVVLRM FIELCASGKC
301: GLFGKGGLIM YDVSTKFDDL MTYHLKDIPI VVLIGVIGAI LGALYNFLMM KVLRVYSVIN ERGNAHKLLL AAVVSILTSC CVFGLPWLAP CRPCPTAGAP
401: SPPNGTCHSL NRFRRFHCPA GHYNDLASLF LNINDDAIRN LYSTGTNDVY HPGSMLAFFV ASYALGVLSY GVVAPSGLFV PIILTGATYG RLVAMLLGGR
501: SGLDHGLVAI LGSASFLGGT LRMTVSVCVI ILELTNNLLL LPLVMLVLLI SKTVADSFNS SIYDLILNLK GLPHLDGHAE PYMRQLTVGD VVAGPLRSFN
601: GVEKVGHIVH TLRTTGHHAF PVVDEPPFSP APVLYGLVLR AHLLVLLKKR EFLTAPVRCP KDYMAGRFEA QDFDKRGSGK QDTIADVELS PEEMEMYVDL
701: HPFTNTSPYT VVETMSLAKA LVLFREVGLR HLLVVPKSCD RSPVVGILTR HDFMPEHILG LHPVLVGSRW KRLRWQKGAV AKKFRSLLDW LANDSG
101: AVENVAGLKH TAVSALMESS SYWTAFWLFA GTNLALLLFA SSITAFVSPA AGGSGIPEVK AYLNGVDAPN IFSLRTLAVK IIGNIAAVSS SLHVGKAGPM
201: VHTGACIAAI FGQGGSRKYG LTCRWLRYFK NDRDRRDLVT IGAGAGVTAA FRAPVGGVLF ALESLSSWWR SALIWRSFFT TAVVAVVLRM FIELCASGKC
301: GLFGKGGLIM YDVSTKFDDL MTYHLKDIPI VVLIGVIGAI LGALYNFLMM KVLRVYSVIN ERGNAHKLLL AAVVSILTSC CVFGLPWLAP CRPCPTAGAP
401: SPPNGTCHSL NRFRRFHCPA GHYNDLASLF LNINDDAIRN LYSTGTNDVY HPGSMLAFFV ASYALGVLSY GVVAPSGLFV PIILTGATYG RLVAMLLGGR
501: SGLDHGLVAI LGSASFLGGT LRMTVSVCVI ILELTNNLLL LPLVMLVLLI SKTVADSFNS SIYDLILNLK GLPHLDGHAE PYMRQLTVGD VVAGPLRSFN
601: GVEKVGHIVH TLRTTGHHAF PVVDEPPFSP APVLYGLVLR AHLLVLLKKR EFLTAPVRCP KDYMAGRFEA QDFDKRGSGK QDTIADVELS PEEMEMYVDL
701: HPFTNTSPYT VVETMSLAKA LVLFREVGLR HLLVVPKSCD RSPVVGILTR HDFMPEHILG LHPVLVGSRW KRLRWQKGAV AKKFRSLLDW LANDSG
001: MPNSTTEDSV AVPLLPSLRR ATNSTSQVAI VGANVCPIES LDYEIAENDF FKQDWRGRSK VEIFQYVFMK WLLCFCIGII VSLIGFANNL AVENLAGVKF
101: VVTSNMMIAG RFAMGFVVFS VTNLILTLFA SVITAFVAPA AAGSGIPEVK AYLNGVDAPE IFSLRTLIIK IIGNISAVSA SLLIGKAGPM VHTGACVASI
201: LGQGGSKRYR LTWRWLRFFK NDRDRRDLVT CGAAAGIAAS FRAPVGGVLF ALEEMSSWWR SALLWRIFFS TAVVAIVLRA LIDVCLSGKC GLFGKGGLIM
301: FDVYSENASY HLGDVLPVLL LGVVGGILGS LYNFLLDKVL RAYNYIYEKG VTWKILLACA ISIFTSCLLF GLPFLASCQP CPVDALEECP TIGRSGNFKK
401: YQCPPGHYND LASLIFNTND DAIKNLFSKN TDFEFHYFSV LVFFVTCFFL SIFSYGIVAP AGLFVPVIVT GASYGRFVGM LLGSNSNLNH GLFAVLGAAS
501: FLGGTMRMTV STCVILLELT NNLLLLPMMM VVLLISKTVA DGFNANIYNL IMKLKGFPYL YSHAEPYMRQ LLVGDVVTGP LQVFNGIEKV ETIVHVLKTT
601: NHNGFPVVDG PPLAAAPVLH GLILRAHILT LLKKRVFMPS PVACDSNTLS QFKAEEFAKK GSGRSDKIED VELSEEELNM YLDLHPFSNA SPYTVVETMS
701: LAKALILFRE VGIRHLLVIP KTSNRPPVVG ILTRHDFMPE HILGLHPSVS RSKWKRLRIR LPFFS
101: VVTSNMMIAG RFAMGFVVFS VTNLILTLFA SVITAFVAPA AAGSGIPEVK AYLNGVDAPE IFSLRTLIIK IIGNISAVSA SLLIGKAGPM VHTGACVASI
201: LGQGGSKRYR LTWRWLRFFK NDRDRRDLVT CGAAAGIAAS FRAPVGGVLF ALEEMSSWWR SALLWRIFFS TAVVAIVLRA LIDVCLSGKC GLFGKGGLIM
301: FDVYSENASY HLGDVLPVLL LGVVGGILGS LYNFLLDKVL RAYNYIYEKG VTWKILLACA ISIFTSCLLF GLPFLASCQP CPVDALEECP TIGRSGNFKK
401: YQCPPGHYND LASLIFNTND DAIKNLFSKN TDFEFHYFSV LVFFVTCFFL SIFSYGIVAP AGLFVPVIVT GASYGRFVGM LLGSNSNLNH GLFAVLGAAS
501: FLGGTMRMTV STCVILLELT NNLLLLPMMM VVLLISKTVA DGFNANIYNL IMKLKGFPYL YSHAEPYMRQ LLVGDVVTGP LQVFNGIEKV ETIVHVLKTT
601: NHNGFPVVDG PPLAAAPVLH GLILRAHILT LLKKRVFMPS PVACDSNTLS QFKAEEFAKK GSGRSDKIED VELSEEELNM YLDLHPFSNA SPYTVVETMS
701: LAKALILFRE VGIRHLLVIP KTSNRPPVVG ILTRHDFMPE HILGLHPSVS RSKWKRLRIR LPFFS
Arabidopsis Description
CLC-GPutative chloride channel-like protein CLC-g [Source:UniProtKB/Swiss-Prot;Acc:P60300]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.