Factsheet for Os03t0695600-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
nucleus 1
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0695700-01	Rice	extracellular, plasma membrane	5.66	4.46
Os08t0300300-01	Rice	plasma membrane	2.83	0.75
Os02t0558100-02	Rice	plasma membrane	0.94	0.25
Os01t0876100-00	Rice	plasma membrane	0.47	0.11
Os12t0438600-01	Rice	plasma membrane	0.0	0.0

Protein Annotations

MapMan:19.2.6.1.2.4	Gene3D:3.60.20.10	EntrezGene:4333803	ProteinID:AAO19369.1	EMBL:AB026566	ProteinID:ABF98343.1
EMBL:AK061228	EMBL:AK099128	ProteinID:BAF12890.1	ProteinID:BAS85882.1	ProteinID:EAZ28234.1	GO:GO:0000502
GO:GO:0003674	GO:GO:0003824	GO:GO:0004175	GO:GO:0004298	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005839	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0008233	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0019774	GO:GO:0051603	InterPro:IPR023333	InterPro:IPR029055	InterPro:Ntn_hydrolases_N	EnsemblPlantsGene:Os03g0695600
EnsemblPlants:Os03t0695600-01	PFAM:PF00227	ScanProsite:PS00854	PFscan:PS51476	PANTHER:PTHR11599	PANTHER:PTHR11599:SF99
InterPro:Proteasome_beta2	InterPro:Proteasome_bsu_CS	InterPro:Proteasome_suB-type	InterPro:Proteasome_sua/b	UniProt:Q9LST6	SUPFAM:SSF56235
MEROPS:T01.984	UniParc:UPI0000002C84	RefSeq:XP_015632007.1	SEG:seg	:	:

Description

20S proteasome beta4 subunitProteasome subunit beta type 2 (EC 3.4.25.1) (20S proteasome alpha subunit D) (20S proteasome subunit beta-4). (Os03t0695600-01);Similar to Proteasome subunit beta type-2. (Os03t0695600-02);Proteasome subunit beta type 2 (EC 3.4.25.1) (20S proteasome alpha subunit D) (20S proteasome subunit beta-4). (Os03t0695600-03)

Coordinates

chr3:-:27858693..27861038

Molecular Weight (calculated)

23479.1 Da

IEP (calculated)

5.337

GRAVY (calculated)

-0.039

Length

212 amino acids

Sequence
(BLAST)

001: MECVIGVVGR DFAVVAADTS AVQSILVHKT DEDKVMVLDS HKLMGASGEP GDRVQFTEFI QKNLHLYQFR NNIPLSTAAT ANFTRGELAT ALRKNPYYVN
101: VLLAGYDSDV GASLYYIDYI ATFHKIEKGA FGYGSYFCLS LMDKLYRPDM SVEEAVDLVD KCIKEIRLRL VVAPQNFIIK IVDKEGAREY ARRAYTDSPP
201: EAATSEAATV AA

Best Arabidopsis Sequence Match ( AT4G14800.1 )
(BLAST)

001: MECVFGLVGN GFAIVAADTS AVHSILLHKN KEDKIMTLDS HKLVAASGEP GDRVQFTEYV QKNVSLYQFR NGIPLSTAAA ANFTRGELAT ALRKNPYSVN
101: ILMAGYDKEA GASLYYIDYI ATLHKVDKGA FGYGSYFSLS TMDRHYRSDM SVEEAIELVD KCILEIRSRL VIAPPNFVIK IVDKDGAREY GWRISTADA

Arabidopsis Description

PBD2Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:F4JIF9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.