Factsheet for Solyc07g007690.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
plasma membrane 5
extracellular 1
golgi 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400078919	Potato	plasma membrane	94.8	97.39
VIT_11s0118g00220.t01	Wine grape	plasma membrane	75.13	76.68
AT5G33280.1	Thale cress	plasma membrane	71.19	73.33
KRH20183	Soybean	plasma membrane	70.94	73.07
Bra038948.1-P	Field mustard	plasma membrane	70.43	72.64
CDY47559	Canola	plasma membrane	70.43	72.64
CDY12393	Canola	plasma membrane	70.18	72.38
Zm00001d039812_P001	Maize	plasma membrane	20.94	67.35
GSMUA_Achr5P23490_001	Banana	plasma membrane	67.13	67.3
Zm00001d002091_P002	Maize	plasma membrane	64.47	67.02
GSMUA_Achr6P02920_001	Banana	plasma membrane	63.83	66.53
GSMUA_Achr3P13250_001	Banana	cytosol, peroxisome, plasma membrane	64.21	64.96
EES11540	Sorghum	plasma membrane	66.5	64.37
TraesCS2D01G519000.2	Wheat	plasma membrane	65.61	63.2
TraesCS2B01G546000.1	Wheat	plasma membrane	65.36	63.04
TraesCS2A01G517500.3	Wheat	plasma membrane	65.74	63.02
Zm00001d015702_P001	Maize	plasma membrane	51.14	62.19
Os08t0300300-01	Rice	plasma membrane	62.69	62.06
EES06435	Sorghum	plasma membrane	62.06	61.66
Solyc10g044470.1.1	Tomato	plasma membrane	59.77	61.65
TraesCS5A01G449500.2	Wheat	plasma membrane	58.88	61.62
Solyc01g103140.2.1	Tomato	plasma membrane	60.41	61.42
GSMUA_Achr1P26050_001	Banana	plasma membrane	60.03	61.27
TraesCS5D01G456000.1	Wheat	plasma membrane	60.53	60.23
TraesCS5B01G457100.1	Wheat	plasma membrane	60.41	60.1
Zm00001d015700_P001	Maize	plasma membrane	14.97	53.64
Solyc02g068080.2.1	Tomato	peroxisome, plasma membrane, vacuole	52.03	52.3
Solyc02g094060.2.1	Tomato	plasma membrane	49.11	50.72
HORVU5Hr1G107380.2	Barley	plastid	54.31	50.65
Solyc09g075800.2.1	Tomato	plasma membrane	42.51	42.24

Protein Annotations

MapMan:24.2.16	Gene3D:3.10.580.10	InterPro:CBS_dom	InterPro:Cl-channel_core	InterPro:Cl-channel_volt-gated	InterPro:Cl_channel_pln
GO:GO:0003674	GO:GO:0005215	GO:GO:0005216	GO:GO:0005247	GO:GO:0005575	GO:GO:0006810
GO:GO:0006811	GO:GO:0006821	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
GO:GO:1902476	InterPro:IPR000644	InterPro:IPR014743	UniProt:K4CBN9	PFAM:PF00571	PFAM:PF00654
PRINTS:PR00762	PRINTS:PR01120	PFscan:PS51371	PANTHER:PTHR11689	PANTHER:PTHR11689:SF66	SUPFAM:SSF54631
SUPFAM:SSF81340	EnsemblPlantsGene:Solyc07g007690.2	EnsemblPlants:Solyc07g007690.2.1	TMHMM:TMhelix	UniParc:UPI000276AE02	SEG:seg

Description

Putative chloride channel-like protein CLC-g [Source:Projected from Arabidopsis thaliana (AT5G33280) UniProtKB/Swiss-Prot;Acc:P60300]

Coordinates

chr7:+:2347155..2354951

Molecular Weight (calculated)

86508.4 Da

IEP (calculated)

8.507

GRAVY (calculated)

0.373

Length

788 amino acids

Sequence
(BLAST)

001: MSVLISPALL NGSSAPVPAT DTEEDEESLT HPLLNRLSRS ASNNTSQVAI VGSSVSPIES LDYEIMENDY FKQDWRRGEK IQILQYVSMK WMMCFFIGLL
101: VGLVGFCNNL AVENIAGMKF VVTSDLMRAR RYTTAFLVFA SSNFGLTLFA GLITAFIAPE AAGSGIPEVK AYLNGVDAPA IFSLRTLFVK IVGSISAVSG
201: SLVIGKAGPM VHTGACIAAL MGQGGSQKYG LTWKWLKYFK NDRDRRDLVT CGSAAGMAAA FRAPVGGLLF ALEEMASWWR SALLWRAFFT TAVVAIVLRA
301: LIDVCLSGKC GLFGKGGLIM FDVTSANIAY QIWDVPPVLL LAVIGGIWAS LYNFLQDRVL RIYNRINERR AAYKIVLALT VSIFTSCLLF GLPWLAPCRP
401: CPSDTSEPCP TIGRNGNYKK FQCPPGHYND LASLFFNTND DAIKNLFSKN TDAEFHPFSM LIFFITCFFL SIFSYGIVAP AGLFVPVIVT GAAYGRFIGM
501: IFGSQSTLNH GLFAVLGSAS FLGGSMRMTV SLCVIILELT NDLLLLPLMM LVLLISKTVA DAFNGNIYDL IMRAKGFPYL ERHAEPYLRQ LAVSDVVTGP
601: LQLFNGIEKV GNIVHVLKTT GHNGFPVVDE PPHSAAPVLY GLVLRAHLIT LLKKKAFLQN PAPAGDDAFE QFSADDFAKK GLEHVDRVED IQLKDEEMDM
701: FIDLHPFCNT SPFTVVETMS LAKALMLFRE VGLRHLLVIP KVSGRIPVVG IITRHDFMPE HVLSLHPSLA KSKWKRLRVK LPRGVKII

Best Arabidopsis Sequence Match ( AT5G33280.1 )
(BLAST)

001: MPNSTTEDSV AVPLLPSLRR ATNSTSQVAI VGANVCPIES LDYEIAENDF FKQDWRGRSK VEIFQYVFMK WLLCFCIGII VSLIGFANNL AVENLAGVKF
101: VVTSNMMIAG RFAMGFVVFS VTNLILTLFA SVITAFVAPA AAGSGIPEVK AYLNGVDAPE IFSLRTLIIK IIGNISAVSA SLLIGKAGPM VHTGACVASI
201: LGQGGSKRYR LTWRWLRFFK NDRDRRDLVT CGAAAGIAAS FRAPVGGVLF ALEEMSSWWR SALLWRIFFS TAVVAIVLRA LIDVCLSGKC GLFGKGGLIM
301: FDVYSENASY HLGDVLPVLL LGVVGGILGS LYNFLLDKVL RAYNYIYEKG VTWKILLACA ISIFTSCLLF GLPFLASCQP CPVDALEECP TIGRSGNFKK
401: YQCPPGHYND LASLIFNTND DAIKNLFSKN TDFEFHYFSV LVFFVTCFFL SIFSYGIVAP AGLFVPVIVT GASYGRFVGM LLGSNSNLNH GLFAVLGAAS
501: FLGGTMRMTV STCVILLELT NNLLLLPMMM VVLLISKTVA DGFNANIYNL IMKLKGFPYL YSHAEPYMRQ LLVGDVVTGP LQVFNGIEKV ETIVHVLKTT
601: NHNGFPVVDG PPLAAAPVLH GLILRAHILT LLKKRVFMPS PVACDSNTLS QFKAEEFAKK GSGRSDKIED VELSEEELNM YLDLHPFSNA SPYTVVETMS
701: LAKALILFRE VGIRHLLVIP KTSNRPPVVG ILTRHDFMPE HILGLHPSVS RSKWKRLRIR LPFFS

Arabidopsis Description

CLC-GPutative chloride channel-like protein CLC-g [Source:UniProtKB/Swiss-Prot;Acc:P60300]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.