Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d002091_P002 | Maize | plasma membrane | 87.47 | 93.93 |
| TraesCS2D01G519000.2 | Wheat | plasma membrane | 83.17 | 82.76 |
| TraesCS2B01G546000.1 | Wheat | plasma membrane | 82.8 | 82.5 |
| TraesCS2A01G517500.3 | Wheat | plasma membrane | 83.17 | 82.36 |
| VIT_11s0118g00220.t01 | Wine grape | plasma membrane | 65.11 | 68.65 |
| PGSC0003DMT400078919 | Potato | plasma membrane | 64.37 | 68.32 |
| AT5G33280.1 | Thale cress | plasma membrane | 63.88 | 67.97 |
| CDY12393 | Canola | plasma membrane | 62.78 | 66.88 |
| Solyc07g007690.2.1 | Tomato | plasma membrane | 64.37 | 66.5 |
| Bra038948.1-P | Field mustard | plasma membrane | 62.41 | 66.49 |
| CDY47559 | Canola | plasma membrane | 62.28 | 66.36 |
| KRH20183 | Soybean | plasma membrane | 61.67 | 65.62 |
| EES06435 | Sorghum | plasma membrane | 62.41 | 64.06 |
| EES12223 | Sorghum | plasma membrane | 57.86 | 59.02 |
| OQU85125 | Sorghum | plasma membrane | 59.09 | 59.02 |
| EES01847 | Sorghum | cytosol, peroxisome, plasma membrane | 54.79 | 56.1 |
| EER90148 | Sorghum | plasma membrane | 49.26 | 50.06 |
| KXG37802 | Sorghum | plasma membrane | 42.63 | 43.48 |
Protein Annotations
| MapMan:24.2.16 | Gene3D:3.10.580.10 | EntrezGene:8068475 | UniProt:C5Y913 | InterPro:CBS_dom | InterPro:Cl-channel_core |
| InterPro:Cl-channel_volt-gated | InterPro:Cl_channel_pln | EnsemblPlants:EES11540 | ProteinID:EES11540 | ProteinID:EES11540.1 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005216 | GO:GO:0005247 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006811 |
| GO:GO:0006821 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | GO:GO:1902476 |
| InterPro:IPR000644 | InterPro:IPR014743 | PFAM:PF00571 | PFAM:PF00654 | PRINTS:PR00762 | PRINTS:PR01120 |
| PFscan:PS51371 | PANTHER:PTHR11689 | PANTHER:PTHR11689:SF66 | SMART:SM00116 | EnsemblPlantsGene:SORBI_3006G238600 | SUPFAM:SSF54631 |
| SUPFAM:SSF81340 | TMHMM:TMhelix | UniParc:UPI0001A86DFE | RefSeq:XP_002447212.1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr6:+:57949559..57955383
Molecular Weight (calculated)
88421.9 Da
IEP (calculated)
8.002
GRAVY (calculated)
0.313
Length
814 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPRDPKEDG FGVGGGGAAD PDADIEAPLL VSSGSSFLLD PALEDGGGGD EEQRRRRRRF IHGSHTHSNT TSQVALVGTD VCPIESLDYE LIENDVFKQD
101: WRARGRGHIL RYVALKWALC FLVGALTAAA GFVANLGVEN VAGAKFVVTS NLMLDGRHGS AFAVFLSSNF ALTMLATVLT VYVAPAAAGS GIPEVKAYLN
201: GVDAPNIFSL KTLIVKIVGC IAAVSSSLHV GKAGPLVHTG ACIASILGQG GSRKYHMTCR WLRYFKNDRD RRDLVTCGSA AGIAAAFRAP VGGVLFALET
301: VSSWWRSALL WRAFFTTAMV AVVLRALIDF CQSDKCGLFG KGGLIMFDVT ADYVTYHLID LPPVITLGVF GGILGSLYNF FLDKVLRLYN LINEKGKTYK
401: LLLAATVTVC TSCCLFGLPW IAACKPCPTD TGEACPSIGR SGNFKKFQCA MDEYNDLASL FFNTNDDTIR NLYSAGTDDE FHISSILVFF VASYFLGIFS
501: YGLALPSGLF VPVILTGAAY GRLVGMLIGS QSTLDHGLFA VLGSAALLGG SMRMTVSVCV IILELTNNLR MLPLVMLVLL ISKVVADAFN ANVYDLLVRL
601: KGFPHLEGYA EPYMRQLSVS DVVTGPLQTF NGIEKVGHIV HVLKTTGHNG FPVVDEPPFS DTPTLYGLIL RDHLLVLLRK KDFIHSCSAS TLKASNHFSH
701: AEFAKRGSGK HDRIEDIELC PEELEMFVDL HPFTNTSPYT VLETMSLAKA LILFREVGLR HLLVLPKSSK RAPVVGILTR HDFMPEHILG LHPFLFKSRW
801: KKVRLGKVKV ADIF
101: WRARGRGHIL RYVALKWALC FLVGALTAAA GFVANLGVEN VAGAKFVVTS NLMLDGRHGS AFAVFLSSNF ALTMLATVLT VYVAPAAAGS GIPEVKAYLN
201: GVDAPNIFSL KTLIVKIVGC IAAVSSSLHV GKAGPLVHTG ACIASILGQG GSRKYHMTCR WLRYFKNDRD RRDLVTCGSA AGIAAAFRAP VGGVLFALET
301: VSSWWRSALL WRAFFTTAMV AVVLRALIDF CQSDKCGLFG KGGLIMFDVT ADYVTYHLID LPPVITLGVF GGILGSLYNF FLDKVLRLYN LINEKGKTYK
401: LLLAATVTVC TSCCLFGLPW IAACKPCPTD TGEACPSIGR SGNFKKFQCA MDEYNDLASL FFNTNDDTIR NLYSAGTDDE FHISSILVFF VASYFLGIFS
501: YGLALPSGLF VPVILTGAAY GRLVGMLIGS QSTLDHGLFA VLGSAALLGG SMRMTVSVCV IILELTNNLR MLPLVMLVLL ISKVVADAFN ANVYDLLVRL
601: KGFPHLEGYA EPYMRQLSVS DVVTGPLQTF NGIEKVGHIV HVLKTTGHNG FPVVDEPPFS DTPTLYGLIL RDHLLVLLRK KDFIHSCSAS TLKASNHFSH
701: AEFAKRGSGK HDRIEDIELC PEELEMFVDL HPFTNTSPYT VLETMSLAKA LILFREVGLR HLLVLPKSSK RAPVVGILTR HDFMPEHILG LHPFLFKSRW
801: KKVRLGKVKV ADIF
001: MPNSTTEDSV AVPLLPSLRR ATNSTSQVAI VGANVCPIES LDYEIAENDF FKQDWRGRSK VEIFQYVFMK WLLCFCIGII VSLIGFANNL AVENLAGVKF
101: VVTSNMMIAG RFAMGFVVFS VTNLILTLFA SVITAFVAPA AAGSGIPEVK AYLNGVDAPE IFSLRTLIIK IIGNISAVSA SLLIGKAGPM VHTGACVASI
201: LGQGGSKRYR LTWRWLRFFK NDRDRRDLVT CGAAAGIAAS FRAPVGGVLF ALEEMSSWWR SALLWRIFFS TAVVAIVLRA LIDVCLSGKC GLFGKGGLIM
301: FDVYSENASY HLGDVLPVLL LGVVGGILGS LYNFLLDKVL RAYNYIYEKG VTWKILLACA ISIFTSCLLF GLPFLASCQP CPVDALEECP TIGRSGNFKK
401: YQCPPGHYND LASLIFNTND DAIKNLFSKN TDFEFHYFSV LVFFVTCFFL SIFSYGIVAP AGLFVPVIVT GASYGRFVGM LLGSNSNLNH GLFAVLGAAS
501: FLGGTMRMTV STCVILLELT NNLLLLPMMM VVLLISKTVA DGFNANIYNL IMKLKGFPYL YSHAEPYMRQ LLVGDVVTGP LQVFNGIEKV ETIVHVLKTT
601: NHNGFPVVDG PPLAAAPVLH GLILRAHILT LLKKRVFMPS PVACDSNTLS QFKAEEFAKK GSGRSDKIED VELSEEELNM YLDLHPFSNA SPYTVVETMS
701: LAKALILFRE VGIRHLLVIP KTSNRPPVVG ILTRHDFMPE HILGLHPSVS RSKWKRLRIR LPFFS
101: VVTSNMMIAG RFAMGFVVFS VTNLILTLFA SVITAFVAPA AAGSGIPEVK AYLNGVDAPE IFSLRTLIIK IIGNISAVSA SLLIGKAGPM VHTGACVASI
201: LGQGGSKRYR LTWRWLRFFK NDRDRRDLVT CGAAAGIAAS FRAPVGGVLF ALEEMSSWWR SALLWRIFFS TAVVAIVLRA LIDVCLSGKC GLFGKGGLIM
301: FDVYSENASY HLGDVLPVLL LGVVGGILGS LYNFLLDKVL RAYNYIYEKG VTWKILLACA ISIFTSCLLF GLPFLASCQP CPVDALEECP TIGRSGNFKK
401: YQCPPGHYND LASLIFNTND DAIKNLFSKN TDFEFHYFSV LVFFVTCFFL SIFSYGIVAP AGLFVPVIVT GASYGRFVGM LLGSNSNLNH GLFAVLGAAS
501: FLGGTMRMTV STCVILLELT NNLLLLPMMM VVLLISKTVA DGFNANIYNL IMKLKGFPYL YSHAEPYMRQ LLVGDVVTGP LQVFNGIEKV ETIVHVLKTT
601: NHNGFPVVDG PPLAAAPVLH GLILRAHILT LLKKRVFMPS PVACDSNTLS QFKAEEFAKK GSGRSDKIED VELSEEELNM YLDLHPFSNA SPYTVVETMS
701: LAKALILFRE VGIRHLLVIP KTSNRPPVVG ILTRHDFMPE HILGLHPSVS RSKWKRLRIR LPFFS
Arabidopsis Description
CLC-GPutative chloride channel-like protein CLC-g [Source:UniProtKB/Swiss-Prot;Acc:P60300]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.