Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d016855_P002 | Maize | plasma membrane | 95.95 | 94.44 |
| Os02t0558100-02 | Rice | plasma membrane | 90.31 | 91.54 |
| TraesCS3D01G126700.1 | Wheat | plasma membrane | 63.19 | 89.88 |
| EES12223 | Sorghum | plasma membrane | 86.63 | 88.47 |
| TraesCS3B01G144700.1 | Wheat | cytosol, nucleus, plasma membrane | 87.36 | 88.45 |
| TraesCS3A01G125300.1 | Wheat | cytosol, nucleus, plasma membrane | 87.24 | 88.32 |
| TraesCS3D01G126600.1 | Wheat | plasma membrane | 86.75 | 87.83 |
| GSMUA_Achr6P24170_001 | Banana | plasma membrane | 74.97 | 84.04 |
| GSMUA_Achr6P07410_001 | Banana | plasma membrane | 78.28 | 83.29 |
| EES01847 | Sorghum | cytosol, peroxisome, plasma membrane | 67.85 | 69.56 |
| EES11540 | Sorghum | plasma membrane | 59.02 | 59.09 |
| EES06435 | Sorghum | plasma membrane | 56.69 | 58.26 |
| EER90148 | Sorghum | plasma membrane | 49.33 | 50.19 |
| KXG37802 | Sorghum | plasma membrane | 44.54 | 45.49 |
Protein Annotations
| MapMan:24.2.16 | Gene3D:3.10.580.10 | UniProt:A0A1Z5RNU9 | InterPro:CBS_dom | InterPro:Cl-channel_core | InterPro:Cl-channel_volt-gated |
| InterPro:Cl_channel_pln | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005216 | GO:GO:0005247 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0006810 | GO:GO:0006811 |
| GO:GO:0006821 | GO:GO:0008150 | GO:GO:0009705 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0034220 |
| GO:GO:0055085 | GO:GO:1902476 | InterPro:IPR000644 | InterPro:IPR014743 | EnsemblPlants:OQU85125 | ProteinID:OQU85125 |
| ProteinID:OQU85125.1 | PFAM:PF00571 | PFAM:PF00654 | PRINTS:PR00762 | PRINTS:PR01120 | PFscan:PS51371 |
| PANTHER:PTHR11689 | PANTHER:PTHR11689:SF109 | SMART:SM00116 | EnsemblPlantsGene:SORBI_3004G179300 | SUPFAM:SSF54631 | SUPFAM:SSF81340 |
| TMHMM:TMhelix | UniParc:UPI0003C70577 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:53215124..53224021
Molecular Weight (calculated)
88511.1 Da
IEP (calculated)
7.960
GRAVY (calculated)
0.278
Length
815 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGNGNSPRP PPRRPEREGS YNNYDIESMD GGSGAAPPPW RQHNNGSSEA LLRYDDGGAD RGSEARQPLL RKRTMNTTSQ IAIVGANVCP IESLDYEVVE
101: NDLFKQDWRS RKKKQIFQYI VLKWSLVLLI GLLTGVVGFF NNLAVENIAG FKLLLTSDLM LKGRYIGAFF VYGGWNLVLA AAAAAICAYI APAAAGSGIP
201: EVKAYLNGVD AYSILAPSTL FVKIFGSILG VSAGFVLGKE GPMVHTGACI ANLLGQGGSR KYHLTCNWLR YFKNDRDRRD LITCGSAAGV AAAFRAPVGG
301: VLFALEEAAS WWRSALLWRT FFTTAVVAVV LRGLIEFCRS GKCGLFGKGG LIMFDLSSTV ATYSTPDLIA IIVLGIIGGI FGGLFNFLLD KILRVYSIIN
401: ERGAPFKILL TITISIITSM CSYGLPWLAA CTPCPVDAVE QCPTVGRSGN YKNFQCPPGH YNDLASLFFN TNDDAIRNLF SNGTSTEFQM SSLFIFFTAI
501: YCLGLVTYGV AVPSGLFIPV ILAGATYGRI VGTLLGSISD LDPGLFALLG AASFLGGTMR MTVSVCVILL ELTNDLPMLP LLMLVLLISK TIADNFNKGV
601: YDQIVVMKGL PFMEAHAEPY MRHLVAGDVV SGPLITFSGV EKVGNIVHAL RLTGHNGFPV VDEPPITEAP ELVGLVTRSH LLVLLNSKNF MKERFKTSGS
701: FVLRRFGAFD FAKPGSGKGL KIEDLDFTDE EMDMYVDLHP ITNTSPYTVV ETMSLAKAAI LFRELGLRHL LVVPKTPDRP PIVGILTRHD FMPEHIHSLF
801: PNLNPHKYHS ASMAG
101: NDLFKQDWRS RKKKQIFQYI VLKWSLVLLI GLLTGVVGFF NNLAVENIAG FKLLLTSDLM LKGRYIGAFF VYGGWNLVLA AAAAAICAYI APAAAGSGIP
201: EVKAYLNGVD AYSILAPSTL FVKIFGSILG VSAGFVLGKE GPMVHTGACI ANLLGQGGSR KYHLTCNWLR YFKNDRDRRD LITCGSAAGV AAAFRAPVGG
301: VLFALEEAAS WWRSALLWRT FFTTAVVAVV LRGLIEFCRS GKCGLFGKGG LIMFDLSSTV ATYSTPDLIA IIVLGIIGGI FGGLFNFLLD KILRVYSIIN
401: ERGAPFKILL TITISIITSM CSYGLPWLAA CTPCPVDAVE QCPTVGRSGN YKNFQCPPGH YNDLASLFFN TNDDAIRNLF SNGTSTEFQM SSLFIFFTAI
501: YCLGLVTYGV AVPSGLFIPV ILAGATYGRI VGTLLGSISD LDPGLFALLG AASFLGGTMR MTVSVCVILL ELTNDLPMLP LLMLVLLISK TIADNFNKGV
601: YDQIVVMKGL PFMEAHAEPY MRHLVAGDVV SGPLITFSGV EKVGNIVHAL RLTGHNGFPV VDEPPITEAP ELVGLVTRSH LLVLLNSKNF MKERFKTSGS
701: FVLRRFGAFD FAKPGSGKGL KIEDLDFTDE EMDMYVDLHP ITNTSPYTVV ETMSLAKAAI LFRELGLRHL LVVPKTPDRP PIVGILTRHD FMPEHIHSLF
801: PNLNPHKYHS ASMAG
001: MDDRHEGDHH DIEVEGGALH GFERKISGIL DDGSVGFRQP LLARNRKNTT SQIAIVGANT CPIESLDYEI FENDFFKQDW RSRKKIEILQ YTFLKWALAF
101: LIGLATGLVG FLNNLGVENI AGFKLLLIGN LMLKEKYFQA FFAFAGCNLI LATAAASLCA FIAPAAAGSG IPEVKAYLNG IDAYSILAPS TLFVKIFGSI
201: FGVAAGFVVG KEGPMVHTGA CIANLLGQGG SKKYRLTWKW LRFFKNDRDR RDLITCGAAA GVAAAFRAPV GGVLFALEEA ASWWRNALLW RTFFTTAVVA
301: VVLRSLIEFC RSGRCGLFGK GGLIMFDVNS GPVLYSTPDL LAIVFLGVIG GVLGSLYNYL VDKVLRTYSI INEKGPRFKI MLVMAVSILS SCCAFGLPWL
401: SQCTPCPIGI EEGKCPSVGR SSIYKSFQCP PNHYNDLSSL LLNTNDDAIR NLFTSRSENE FHISTLAIFF VAVYCLGIIT YGIAIPSGLF IPVILAGASY
501: GRLVGRLLGP VSQLDVGLFS LLGAASFLGG TMRMTVSLCV ILLELTNNLL MLPLVMLVLL ISKTVADCFN RGVYDQIVTM KGLPYMEDHA EPYMRNLVAK
601: DVVSGALISF SRVEKVGVIW QALKMTRHNG FPVIDEPPFT EASELCGIAL RSHLLVLLQG KKFSKQRTTF GSQILRSCKA RDFGKAGLGK GLKIEDLDLS
701: EEEMEMYVDL HPITNTSPYT VLETLSLAKA AILFRQLGLR HLCVVPKTPG RPPIVGILTR HDFMPEHVLG LYPHIDPLK
101: LIGLATGLVG FLNNLGVENI AGFKLLLIGN LMLKEKYFQA FFAFAGCNLI LATAAASLCA FIAPAAAGSG IPEVKAYLNG IDAYSILAPS TLFVKIFGSI
201: FGVAAGFVVG KEGPMVHTGA CIANLLGQGG SKKYRLTWKW LRFFKNDRDR RDLITCGAAA GVAAAFRAPV GGVLFALEEA ASWWRNALLW RTFFTTAVVA
301: VVLRSLIEFC RSGRCGLFGK GGLIMFDVNS GPVLYSTPDL LAIVFLGVIG GVLGSLYNYL VDKVLRTYSI INEKGPRFKI MLVMAVSILS SCCAFGLPWL
401: SQCTPCPIGI EEGKCPSVGR SSIYKSFQCP PNHYNDLSSL LLNTNDDAIR NLFTSRSENE FHISTLAIFF VAVYCLGIIT YGIAIPSGLF IPVILAGASY
501: GRLVGRLLGP VSQLDVGLFS LLGAASFLGG TMRMTVSLCV ILLELTNNLL MLPLVMLVLL ISKTVADCFN RGVYDQIVTM KGLPYMEDHA EPYMRNLVAK
601: DVVSGALISF SRVEKVGVIW QALKMTRHNG FPVIDEPPFT EASELCGIAL RSHLLVLLQG KKFSKQRTTF GSQILRSCKA RDFGKAGLGK GLKIEDLDLS
701: EEEMEMYVDL HPITNTSPYT VLETLSLAKA AILFRQLGLR HLCVVPKTPG RPPIVGILTR HDFMPEHVLG LYPHIDPLK
Arabidopsis Description
CLC-CChloride channel protein CLC-c [Source:UniProtKB/Swiss-Prot;Acc:Q96282]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.