Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G126700.1 | Wheat | plasma membrane | 70.56 | 99.13 |
| TraesCS3D01G126600.1 | Wheat | plasma membrane | 98.76 | 98.76 |
| TraesCS3B01G144700.1 | Wheat | cytosol, nucleus, plasma membrane | 98.51 | 98.51 |
| Os02t0558100-02 | Rice | plasma membrane | 87.58 | 87.69 |
| OQU85125 | Sorghum | plasma membrane | 88.32 | 87.24 |
| Zm00001d016855_P002 | Maize | plasma membrane | 88.32 | 85.87 |
| TraesCS2A01G309900.1 | Wheat | plasma membrane | 81.99 | 82.29 |
| GSMUA_Achr6P24170_001 | Banana | plasma membrane | 72.67 | 80.47 |
| GSMUA_Achr6P07410_001 | Banana | plasma membrane | 76.15 | 80.03 |
| TraesCS3A01G390100.1 | Wheat | plasma membrane, plastid | 63.6 | 64.4 |
| TraesCS5A01G449500.2 | Wheat | plasma membrane | 53.54 | 57.24 |
| TraesCS2A01G517500.3 | Wheat | plasma membrane | 56.89 | 55.72 |
| TraesCS6A01G098600.1 | Wheat | plasma membrane | 48.57 | 50.26 |
| TraesCS6A01G098500.2 | Wheat | cytosol, peroxisome, plasma membrane | 48.45 | 48.99 |
| TraesCS4A01G277600.2 | Wheat | plasma membrane | 44.72 | 44.66 |
Protein Annotations
| MapMan:24.2.16 | Gene3D:3.10.580.10 | InterPro:CBS_dom | InterPro:Cl-channel_core | InterPro:Cl-channel_volt-gated | InterPro:Cl_channel_pln |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005247 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006821 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0055085 | InterPro:IPR000644 | InterPro:IPR014743 | PFAM:PF00571 |
| PFAM:PF00654 | PRINTS:PR00762 | PRINTS:PR01120 | PFscan:PS51371 | PANTHER:PTHR11689 | PANTHER:PTHR11689:SF109 |
| SMART:SM00116 | SUPFAM:SSF54631 | SUPFAM:SSF81340 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3A01G125300 | EnsemblPlants:TraesCS3A01G125300.1 |
| TIGR:cd03685 | TIGR:cd04591 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3A:-:100885709..100893016
Molecular Weight (calculated)
87578.3 Da
IEP (calculated)
7.493
GRAVY (calculated)
0.347
Length
805 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGGQSPRPQ QHHRTPEREG NNNHNIEGMD GAAEGDWWQN SSSNALLRYD DRGSICEPLM RKRTINTTSQ IAIVGANICP IESLDYEVVE NNLFKQDWRS
101: RKKKQIFQYI VMKWTLVLLI GLLTGLVGFF NNLAVENIAG LKLLITSDLM LKQRYFTAFL AYGGSNLVLA AAAAAICAYI APAAAGSGIP EVKAYLNGVD
201: AYSILAPSTL FVKIFGSILG VSAGFVLGKE GPMVHTGACI ANLLGQGGSR KYHLTCNWLR YFKNDRDRRD LITCGCAAGV AAAFRAPVGG VLFALEEAAS
301: WWRSALLWRA FFTTAVVAVV LRTLIEFCRS GKCGLFGQGG LIMFDLSSTV ATYSSPDLLA IILLGIIGGI FGGLFNFLLD KILRVYSIIN ERGAPSKILL
401: TIIVSVITSM CSYGLPWLAS CTQCPEDAVE QCPTVGRSGN YKNFQCPPGY YNGMASLFFN TNDDAIRNLF STGTATEYHM SSLFIFFVAI YCLGLVTYGI
501: AVPSGLFIPV ILAGATYGRI VGTLLGSISN LDPGLFALLG AASFLGGTMR MTVSVCVILL ELTNDLQMLP LVMLVLLISK TIADNFNKGV YDQIVVMKGL
601: PYMEAHAEPY MRHLVAGDVV SGPLITFSGV EKVGDIVTAL RITGHNGFPV VDEPPLTEVP ELVGLVIRSH LLVLLKGKMF MKEPVKMSGS FVMERFGAFD
701: FAKAGSGKGL KIEDLYFTDE EMQMYVDLHA IANTSPYTVV ETMSLAKAAL LFRELGLRHL LVVPKTPYRP PIVGILTRHD FVAEHIHDLF PSLNPHNFHS
801: ASMGG
101: RKKKQIFQYI VMKWTLVLLI GLLTGLVGFF NNLAVENIAG LKLLITSDLM LKQRYFTAFL AYGGSNLVLA AAAAAICAYI APAAAGSGIP EVKAYLNGVD
201: AYSILAPSTL FVKIFGSILG VSAGFVLGKE GPMVHTGACI ANLLGQGGSR KYHLTCNWLR YFKNDRDRRD LITCGCAAGV AAAFRAPVGG VLFALEEAAS
301: WWRSALLWRA FFTTAVVAVV LRTLIEFCRS GKCGLFGQGG LIMFDLSSTV ATYSSPDLLA IILLGIIGGI FGGLFNFLLD KILRVYSIIN ERGAPSKILL
401: TIIVSVITSM CSYGLPWLAS CTQCPEDAVE QCPTVGRSGN YKNFQCPPGY YNGMASLFFN TNDDAIRNLF STGTATEYHM SSLFIFFVAI YCLGLVTYGI
501: AVPSGLFIPV ILAGATYGRI VGTLLGSISN LDPGLFALLG AASFLGGTMR MTVSVCVILL ELTNDLQMLP LVMLVLLISK TIADNFNKGV YDQIVVMKGL
601: PYMEAHAEPY MRHLVAGDVV SGPLITFSGV EKVGDIVTAL RITGHNGFPV VDEPPLTEVP ELVGLVIRSH LLVLLKGKMF MKEPVKMSGS FVMERFGAFD
701: FAKAGSGKGL KIEDLYFTDE EMQMYVDLHA IANTSPYTVV ETMSLAKAAL LFRELGLRHL LVVPKTPYRP PIVGILTRHD FVAEHIHDLF PSLNPHNFHS
801: ASMGG
001: MVEEDLNQIG GNSNYNGEGG DPESNTLNQP LVKANRTLSS TPLALVGAKV SHIESLDYEI NENDLFKHDW RKRSKAQVLQ YVFLKWTLAC LVGLFTGLIA
101: TLINLAVENI AGYKLLAVGH FLTQERYVTG LMVLVGANLG LTLVASVLCV CFAPTAAGPG IPEIKAYLNG VDTPNMFGAT TMIVKIVGSI GAVAAGLDLG
201: KEGPLVHIGS CIASLLGQGG TDNHRIKWRW LRYFNNDRDR RDLITCGSAA GVCAAFRSPV GGVLFALEEV ATWWRSALLW RTFFSTAVVV VVLREFIEIC
301: NSGKCGLFGK GGLIMFDVSH VTYTYHVTDI IPVMLIGVIG GILGSLYNHL LHKVLRLYNL INEKGKIHKV LLSLTVSLFT SVCLYGLPFL AKCKPCDPSI
401: DEICPTNGRS GNFKQFHCPK GYYNDLATLL LTTNDDAVRN LFSSNTPNEF GMGSLWIFFV LYCILGLFTF GIATPSGLFL PIILMGAAYG RMLGAAMGSY
501: TSIDQGLYAV LGAAALMAGS MRMTVSLCVI FLELTNNLLL LPITMIVLLI AKTVGDSFNP SIYDIILHLK GLPFLEANPE PWMRNLTVGE LGDAKPPVVT
601: LQGVEKVSNI VDVLKNTTHN AFPVLDEAEV PQVGLATGAT ELHGLILRAH LVKVLKKRWF LTEKRRTEEW EVREKFPWDE LAEREDNFDD VAITSAEMEM
701: YVDLHPLTNT TPYTVMENMS VAKALVLFRQ VGLRHLLIVP KIQASGMCPV VGILTRQDLR AYNILQAFPL LEKSKGGKTH
101: TLINLAVENI AGYKLLAVGH FLTQERYVTG LMVLVGANLG LTLVASVLCV CFAPTAAGPG IPEIKAYLNG VDTPNMFGAT TMIVKIVGSI GAVAAGLDLG
201: KEGPLVHIGS CIASLLGQGG TDNHRIKWRW LRYFNNDRDR RDLITCGSAA GVCAAFRSPV GGVLFALEEV ATWWRSALLW RTFFSTAVVV VVLREFIEIC
301: NSGKCGLFGK GGLIMFDVSH VTYTYHVTDI IPVMLIGVIG GILGSLYNHL LHKVLRLYNL INEKGKIHKV LLSLTVSLFT SVCLYGLPFL AKCKPCDPSI
401: DEICPTNGRS GNFKQFHCPK GYYNDLATLL LTTNDDAVRN LFSSNTPNEF GMGSLWIFFV LYCILGLFTF GIATPSGLFL PIILMGAAYG RMLGAAMGSY
501: TSIDQGLYAV LGAAALMAGS MRMTVSLCVI FLELTNNLLL LPITMIVLLI AKTVGDSFNP SIYDIILHLK GLPFLEANPE PWMRNLTVGE LGDAKPPVVT
601: LQGVEKVSNI VDVLKNTTHN AFPVLDEAEV PQVGLATGAT ELHGLILRAH LVKVLKKRWF LTEKRRTEEW EVREKFPWDE LAEREDNFDD VAITSAEMEM
701: YVDLHPLTNT TPYTVMENMS VAKALVLFRQ VGLRHLLIVP KIQASGMCPV VGILTRQDLR AYNILQAFPL LEKSKGGKTH
Arabidopsis Description
CLC-BChloride channel protein [Source:UniProtKB/TrEMBL;Acc:A0A178VKG6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.