Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G126700.1 | Wheat | plasma membrane | 71.18 | 100.0 |
| TraesCS3A01G125300.1 | Wheat | cytosol, nucleus, plasma membrane | 98.76 | 98.76 |
| TraesCS3B01G144700.1 | Wheat | cytosol, nucleus, plasma membrane | 98.51 | 98.51 |
| Os02t0558100-02 | Rice | plasma membrane | 87.2 | 87.31 |
| OQU85125 | Sorghum | plasma membrane | 87.83 | 86.75 |
| Zm00001d016855_P002 | Maize | plasma membrane | 88.07 | 85.63 |
| TraesCS2D01G308100.1 | Wheat | plasma membrane | 81.86 | 81.86 |
| GSMUA_Achr6P24170_001 | Banana | plasma membrane | 72.42 | 80.19 |
| GSMUA_Achr6P07410_001 | Banana | plasma membrane | 75.9 | 79.77 |
| TraesCS3D01G379600.1 | Wheat | plasma membrane, plastid | 63.6 | 64.48 |
| TraesCS2D01G519000.2 | Wheat | plasma membrane | 57.39 | 56.48 |
| TraesCS5D01G456000.1 | Wheat | plasma membrane | 54.04 | 54.92 |
| TraesCS6D01G084300.1 | Wheat | cytosol, nucleus, plasma membrane | 49.94 | 51.08 |
| TraesCS6D01G084000.2 | Wheat | plasma membrane | 49.57 | 50.89 |
| TraesCS4D01G033500.1 | Wheat | plasma membrane | 45.09 | 45.21 |
Protein Annotations
| MapMan:24.2.16 | Gene3D:3.10.580.10 | InterPro:CBS_dom | InterPro:Cl-channel_core | InterPro:Cl-channel_volt-gated | InterPro:Cl_channel_pln |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005247 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006821 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0055085 | InterPro:IPR000644 | InterPro:IPR014743 | PFAM:PF00571 |
| PFAM:PF00654 | PRINTS:PR00762 | PRINTS:PR01120 | PFscan:PS51371 | PANTHER:PTHR11689 | PANTHER:PTHR11689:SF109 |
| SMART:SM00116 | SUPFAM:SSF54631 | SUPFAM:SSF81340 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3D01G126600 | EnsemblPlants:TraesCS3D01G126600.1 |
| TIGR:cd03685 | TIGR:cd04591 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3D:-:84569759..84575650
Molecular Weight (calculated)
87581.4 Da
IEP (calculated)
7.246
GRAVY (calculated)
0.356
Length
805 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGGQSPRPQ QHHRMPEREG NNNHDIEGMD GAAEGDWWQN SSSNALLRYD DRGSICEPLM RKRTINTTSQ IAIVGANICP IESLDYEVVE NNLFKQDWRS
101: RKKKHIFQYI IMKWTLVLLI GLLTGLVGFF NNLAVENIAG LKLLITSDLM LKERYFTAFL AYGGSNLVLA AAAAAICAYI APAAAGSGIP EVKAYLNGVD
201: AYSILAPSTL FVKIFGSILG VSAGFVLGKE GPMVHTGACI ANLLGQGGSR KYHLTCNWLR YFKNDRDRRD LITCGCAAGV AAAFRAPVGG VLFALEEAAS
301: WWRSALLWRA FFTTAVVAVV LRTLIEFCRS GKCGLFGQGG LIMFDLSSTV ATYSSPDLLA IILLGIIGGI FGGLFNFLLD KILRIYSIIN ERGAPSKILL
401: TIIVSVITSM CSYGLPWLAS CTQCPEDAVE QCPTVGRSGN YKNFQCPPGY YNGMASLFFN TNDDAIRNLF STGTATEYHM SSLFIFFVAI YCLGLVTYGI
501: AVPSGLFIPV ILAGATYGRI VGTLLGSISS LDPGLFALLG AASFLGGTMR MTVSVCVILL ELTNDLQMLP LVMLVLLISK TIADSFNKGV YDQIVVMKGL
601: PYMEAHAEPY MRHLVAGDVV TGPLITFSGV EKVGDIVTAL RITGHNGFPV VDEPPLTEVP ELVGLVIRSH LLVLLKGKMF MKEPVKMSGS FVMERFGAFD
701: FAKAGSGKGL KIEDLHFTDE EMQMYVDLHA IANTSPYTVV ETMSLAKAAL LFRELGLRHL LVVPKTPYRP PIVGILTRHD FVAEHIHDLF PSLNPHNFHS
801: ASMGG
101: RKKKHIFQYI IMKWTLVLLI GLLTGLVGFF NNLAVENIAG LKLLITSDLM LKERYFTAFL AYGGSNLVLA AAAAAICAYI APAAAGSGIP EVKAYLNGVD
201: AYSILAPSTL FVKIFGSILG VSAGFVLGKE GPMVHTGACI ANLLGQGGSR KYHLTCNWLR YFKNDRDRRD LITCGCAAGV AAAFRAPVGG VLFALEEAAS
301: WWRSALLWRA FFTTAVVAVV LRTLIEFCRS GKCGLFGQGG LIMFDLSSTV ATYSSPDLLA IILLGIIGGI FGGLFNFLLD KILRIYSIIN ERGAPSKILL
401: TIIVSVITSM CSYGLPWLAS CTQCPEDAVE QCPTVGRSGN YKNFQCPPGY YNGMASLFFN TNDDAIRNLF STGTATEYHM SSLFIFFVAI YCLGLVTYGI
501: AVPSGLFIPV ILAGATYGRI VGTLLGSISS LDPGLFALLG AASFLGGTMR MTVSVCVILL ELTNDLQMLP LVMLVLLISK TIADSFNKGV YDQIVVMKGL
601: PYMEAHAEPY MRHLVAGDVV TGPLITFSGV EKVGDIVTAL RITGHNGFPV VDEPPLTEVP ELVGLVIRSH LLVLLKGKMF MKEPVKMSGS FVMERFGAFD
701: FAKAGSGKGL KIEDLHFTDE EMQMYVDLHA IANTSPYTVV ETMSLAKAAL LFRELGLRHL LVVPKTPYRP PIVGILTRHD FVAEHIHDLF PSLNPHNFHS
801: ASMGG
001: MDDRHEGDHH DIEVEGGALH GFERKISGIL DDGSVGFRQP LLARNRKNTT SQIAIVGANT CPIESLDYEI FENDFFKQDW RSRKKIEILQ YTFLKWALAF
101: LIGLATGLVG FLNNLGVENI AGFKLLLIGN LMLKEKYFQA FFAFAGCNLI LATAAASLCA FIAPAAAGSG IPEVKAYLNG IDAYSILAPS TLFVKIFGSI
201: FGVAAGFVVG KEGPMVHTGA CIANLLGQGG SKKYRLTWKW LRFFKNDRDR RDLITCGAAA GVAAAFRAPV GGVLFALEEA ASWWRNALLW RTFFTTAVVA
301: VVLRSLIEFC RSGRCGLFGK GGLIMFDVNS GPVLYSTPDL LAIVFLGVIG GVLGSLYNYL VDKVLRTYSI INEKGPRFKI MLVMAVSILS SCCAFGLPWL
401: SQCTPCPIGI EEGKCPSVGR SSIYKSFQCP PNHYNDLSSL LLNTNDDAIR NLFTSRSENE FHISTLAIFF VAVYCLGIIT YGIAIPSGLF IPVILAGASY
501: GRLVGRLLGP VSQLDVGLFS LLGAASFLGG TMRMTVSLCV ILLELTNNLL MLPLVMLVLL ISKTVADCFN RGVYDQIVTM KGLPYMEDHA EPYMRNLVAK
601: DVVSGALISF SRVEKVGVIW QALKMTRHNG FPVIDEPPFT EASELCGIAL RSHLLVLLQG KKFSKQRTTF GSQILRSCKA RDFGKAGLGK GLKIEDLDLS
701: EEEMEMYVDL HPITNTSPYT VLETLSLAKA AILFRQLGLR HLCVVPKTPG RPPIVGILTR HDFMPEHVLG LYPHIDPLK
101: LIGLATGLVG FLNNLGVENI AGFKLLLIGN LMLKEKYFQA FFAFAGCNLI LATAAASLCA FIAPAAAGSG IPEVKAYLNG IDAYSILAPS TLFVKIFGSI
201: FGVAAGFVVG KEGPMVHTGA CIANLLGQGG SKKYRLTWKW LRFFKNDRDR RDLITCGAAA GVAAAFRAPV GGVLFALEEA ASWWRNALLW RTFFTTAVVA
301: VVLRSLIEFC RSGRCGLFGK GGLIMFDVNS GPVLYSTPDL LAIVFLGVIG GVLGSLYNYL VDKVLRTYSI INEKGPRFKI MLVMAVSILS SCCAFGLPWL
401: SQCTPCPIGI EEGKCPSVGR SSIYKSFQCP PNHYNDLSSL LLNTNDDAIR NLFTSRSENE FHISTLAIFF VAVYCLGIIT YGIAIPSGLF IPVILAGASY
501: GRLVGRLLGP VSQLDVGLFS LLGAASFLGG TMRMTVSLCV ILLELTNNLL MLPLVMLVLL ISKTVADCFN RGVYDQIVTM KGLPYMEDHA EPYMRNLVAK
601: DVVSGALISF SRVEKVGVIW QALKMTRHNG FPVIDEPPFT EASELCGIAL RSHLLVLLQG KKFSKQRTTF GSQILRSCKA RDFGKAGLGK GLKIEDLDLS
701: EEEMEMYVDL HPITNTSPYT VLETLSLAKA AILFRQLGLR HLCVVPKTPG RPPIVGILTR HDFMPEHVLG LYPHIDPLK
Arabidopsis Description
CLC-CChloride channel protein CLC-c [Source:UniProtKB/Swiss-Prot;Acc:Q96282]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.