Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G308100.1 | Wheat | plasma membrane | 99.5 | 99.13 |
| TraesCS2B01G326900.1 | Wheat | plasma membrane | 99.25 | 98.88 |
| HORVU2Hr1G077080.3 | Barley | mitochondrion, peroxisome, plasma membrane, plastid | 91.27 | 89.93 |
| EES12223 | Sorghum | plasma membrane | 88.53 | 88.97 |
| Zm00001d025474_P003 | Maize | plasma membrane | 87.66 | 88.43 |
| TraesCS3A01G125300.1 | Wheat | cytosol, nucleus, plasma membrane | 82.29 | 81.99 |
| GSMUA_Achr6P07410_001 | Banana | plasma membrane | 78.18 | 81.85 |
| GSMUA_Achr6P24170_001 | Banana | plasma membrane | 73.94 | 81.57 |
| TraesCS3A01G390100.1 | Wheat | plasma membrane, plastid | 65.84 | 66.42 |
| TraesCS5A01G449500.2 | Wheat | plasma membrane | 54.24 | 57.77 |
| TraesCS2A01G517500.3 | Wheat | plasma membrane | 58.35 | 56.93 |
| TraesCS6A01G098600.1 | Wheat | plasma membrane | 51.12 | 52.7 |
| TraesCS6A01G098500.2 | Wheat | cytosol, peroxisome, plasma membrane | 50.25 | 50.63 |
| TraesCS4A01G277600.2 | Wheat | plasma membrane | 44.51 | 44.29 |
Protein Annotations
| MapMan:24.2.16 | Gene3D:3.10.580.10 | InterPro:CBS_dom | InterPro:Cl-channel_core | InterPro:Cl-channel_volt-gated | InterPro:Cl_channel_pln |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005247 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006821 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0055085 | InterPro:IPR000644 | InterPro:IPR014743 | PFAM:PF00571 |
| PFAM:PF00654 | PRINTS:PR00762 | PRINTS:PR01120 | PFscan:PS51371 | PANTHER:PTHR11689 | PANTHER:PTHR11689:SF109 |
| SMART:SM00116 | SUPFAM:SSF54631 | SUPFAM:SSF81340 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS2A01G309900 | EnsemblPlants:TraesCS2A01G309900.1 |
| TIGR:cd03685 | TIGR:cd04591 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2A:-:533463936..533468945
Molecular Weight (calculated)
87199.8 Da
IEP (calculated)
7.843
GRAVY (calculated)
0.328
Length
802 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGDHAPHSN SNQHQPPSPL LEREGSFNYD IESMDGGGWR GAGRYASSDA LLRYDDDDGP RERLLRKRTM NTTSQIAIVG ANVFAIESLD YEIVENDLFK
101: QDWRSRKKNQ IFQYVVLKWA LVLLIGLLTG LVGFFNNLAV ENIAGFKLVL TGDLMLQKRY FTAFLAYGGC NLVLGATAAA LCAYIAPAAA GSGIPEVKAY
201: LNGVDAYSIL APSTLFVKIF GSILGVSGGF VLGKEGPMVH TGACIANLLG QGGSRKYHLT WNWLKYFKND RDRRDLITCG AAAGVAAAFR APVGGVLFAL
301: EEAASWWRSA LLWRTFFTTA VVAVVLRALI EFCRKGKCGL FGQGGLIMFD LSSNVPSYGT QDLIAIIILG VIGGVFGGLF NFLLDRILRV YSIINERGAP
401: SKILLTITIS IITSACSYGL PWLAACSPCP VGSMEECPTI GRSGNFKSFQ CPPGHYNGLA SLFFNTNDDA IRNLFSRGTE NEFHMSSLFV FFIAIYCLGL
501: VTYGIAVPSG LFIPVILAGA TYGRIVGTLL GPMSDIDPGL FALLGAASFL GGTMRMTVSV CVILLELTNE LHMLPLVMLV LLISKTIADC FNKGVYDQIV
601: VMKGLPFMEA HAEPYMRHLV ASDVVSGPLI SFSGVEKVGN IVHALRITGH NGFPVVDEPP VSEAPELVGL VLRSHVLVLL SGRNFMKEKV KTSGSFVLRR
701: FGAFDFAKPG SGKGMKIEDL DFTEEEMEMY VDLHPITNTS PYTVVETMSL AKAAVLFRAL GLRHLLVVPK TPGRFPIVGI LTRHDLMPEH IHGLFPNLRK
801: SH
101: QDWRSRKKNQ IFQYVVLKWA LVLLIGLLTG LVGFFNNLAV ENIAGFKLVL TGDLMLQKRY FTAFLAYGGC NLVLGATAAA LCAYIAPAAA GSGIPEVKAY
201: LNGVDAYSIL APSTLFVKIF GSILGVSGGF VLGKEGPMVH TGACIANLLG QGGSRKYHLT WNWLKYFKND RDRRDLITCG AAAGVAAAFR APVGGVLFAL
301: EEAASWWRSA LLWRTFFTTA VVAVVLRALI EFCRKGKCGL FGQGGLIMFD LSSNVPSYGT QDLIAIIILG VIGGVFGGLF NFLLDRILRV YSIINERGAP
401: SKILLTITIS IITSACSYGL PWLAACSPCP VGSMEECPTI GRSGNFKSFQ CPPGHYNGLA SLFFNTNDDA IRNLFSRGTE NEFHMSSLFV FFIAIYCLGL
501: VTYGIAVPSG LFIPVILAGA TYGRIVGTLL GPMSDIDPGL FALLGAASFL GGTMRMTVSV CVILLELTNE LHMLPLVMLV LLISKTIADC FNKGVYDQIV
601: VMKGLPFMEA HAEPYMRHLV ASDVVSGPLI SFSGVEKVGN IVHALRITGH NGFPVVDEPP VSEAPELVGL VLRSHVLVLL SGRNFMKEKV KTSGSFVLRR
701: FGAFDFAKPG SGKGMKIEDL DFTEEEMEMY VDLHPITNTS PYTVVETMSL AKAAVLFRAL GLRHLLVVPK TPGRFPIVGI LTRHDLMPEH IHGLFPNLRK
801: SH
001: MDDRHEGDHH DIEVEGGALH GFERKISGIL DDGSVGFRQP LLARNRKNTT SQIAIVGANT CPIESLDYEI FENDFFKQDW RSRKKIEILQ YTFLKWALAF
101: LIGLATGLVG FLNNLGVENI AGFKLLLIGN LMLKEKYFQA FFAFAGCNLI LATAAASLCA FIAPAAAGSG IPEVKAYLNG IDAYSILAPS TLFVKIFGSI
201: FGVAAGFVVG KEGPMVHTGA CIANLLGQGG SKKYRLTWKW LRFFKNDRDR RDLITCGAAA GVAAAFRAPV GGVLFALEEA ASWWRNALLW RTFFTTAVVA
301: VVLRSLIEFC RSGRCGLFGK GGLIMFDVNS GPVLYSTPDL LAIVFLGVIG GVLGSLYNYL VDKVLRTYSI INEKGPRFKI MLVMAVSILS SCCAFGLPWL
401: SQCTPCPIGI EEGKCPSVGR SSIYKSFQCP PNHYNDLSSL LLNTNDDAIR NLFTSRSENE FHISTLAIFF VAVYCLGIIT YGIAIPSGLF IPVILAGASY
501: GRLVGRLLGP VSQLDVGLFS LLGAASFLGG TMRMTVSLCV ILLELTNNLL MLPLVMLVLL ISKTVADCFN RGVYDQIVTM KGLPYMEDHA EPYMRNLVAK
601: DVVSGALISF SRVEKVGVIW QALKMTRHNG FPVIDEPPFT EASELCGIAL RSHLLVLLQG KKFSKQRTTF GSQILRSCKA RDFGKAGLGK GLKIEDLDLS
701: EEEMEMYVDL HPITNTSPYT VLETLSLAKA AILFRQLGLR HLCVVPKTPG RPPIVGILTR HDFMPEHVLG LYPHIDPLK
101: LIGLATGLVG FLNNLGVENI AGFKLLLIGN LMLKEKYFQA FFAFAGCNLI LATAAASLCA FIAPAAAGSG IPEVKAYLNG IDAYSILAPS TLFVKIFGSI
201: FGVAAGFVVG KEGPMVHTGA CIANLLGQGG SKKYRLTWKW LRFFKNDRDR RDLITCGAAA GVAAAFRAPV GGVLFALEEA ASWWRNALLW RTFFTTAVVA
301: VVLRSLIEFC RSGRCGLFGK GGLIMFDVNS GPVLYSTPDL LAIVFLGVIG GVLGSLYNYL VDKVLRTYSI INEKGPRFKI MLVMAVSILS SCCAFGLPWL
401: SQCTPCPIGI EEGKCPSVGR SSIYKSFQCP PNHYNDLSSL LLNTNDDAIR NLFTSRSENE FHISTLAIFF VAVYCLGIIT YGIAIPSGLF IPVILAGASY
501: GRLVGRLLGP VSQLDVGLFS LLGAASFLGG TMRMTVSLCV ILLELTNNLL MLPLVMLVLL ISKTVADCFN RGVYDQIVTM KGLPYMEDHA EPYMRNLVAK
601: DVVSGALISF SRVEKVGVIW QALKMTRHNG FPVIDEPPFT EASELCGIAL RSHLLVLLQG KKFSKQRTTF GSQILRSCKA RDFGKAGLGK GLKIEDLDLS
701: EEEMEMYVDL HPITNTSPYT VLETLSLAKA AILFRQLGLR HLCVVPKTPG RPPIVGILTR HDFMPEHVLG LYPHIDPLK
Arabidopsis Description
CLC-CChloride channel protein CLC-c [Source:UniProtKB/Swiss-Prot;Acc:Q96282]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.