Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plastid 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G308100.1 | Wheat | plasma membrane | 99.75 | 99.75 |
| TraesCS2A01G309900.1 | Wheat | plasma membrane | 98.88 | 99.25 |
| HORVU2Hr1G077080.3 | Barley | mitochondrion, peroxisome, plasma membrane, plastid | 91.18 | 90.17 |
| EES12223 | Sorghum | plasma membrane | 88.2 | 88.97 |
| Zm00001d025474_P003 | Maize | plasma membrane | 87.33 | 88.43 |
| TraesCS3B01G144700.1 | Wheat | cytosol, nucleus, plasma membrane | 82.36 | 82.36 |
| GSMUA_Achr6P07410_001 | Banana | plasma membrane | 78.01 | 81.98 |
| GSMUA_Achr6P24170_001 | Banana | plasma membrane | 73.79 | 81.71 |
| TraesCS3B01G418700.1 | Wheat | mitochondrion | 66.34 | 67.17 |
| TraesCS2B01G546000.1 | Wheat | plasma membrane | 58.26 | 57.41 |
| TraesCS5B01G457100.1 | Wheat | plasma membrane | 55.4 | 56.31 |
| TraesCS6B01G126800.1 | Wheat | plasma membrane | 51.8 | 53.19 |
| TraesCS6B01G126400.1 | Wheat | plasma membrane | 51.68 | 52.86 |
| TraesCS4B01G035500.1 | Wheat | plasma membrane | 44.84 | 44.79 |
Protein Annotations
| MapMan:24.2.16 | Gene3D:3.10.580.10 | InterPro:CBS_dom | InterPro:Cl-channel_core | InterPro:Cl-channel_volt-gated | InterPro:Cl_channel_pln |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005247 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006821 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0055085 | InterPro:IPR000644 | InterPro:IPR014743 | PFAM:PF00571 |
| PFAM:PF00654 | PRINTS:PR00762 | PRINTS:PR01120 | PFscan:PS51371 | PANTHER:PTHR11689 | PANTHER:PTHR11689:SF109 |
| SMART:SM00116 | SUPFAM:SSF54631 | SUPFAM:SSF81340 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS2B01G326900 | EnsemblPlants:TraesCS2B01G326900.1 |
| TIGR:cd03685 | TIGR:cd04591 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2B:-:468238404..468243493
Molecular Weight (calculated)
87362.0 Da
IEP (calculated)
7.837
GRAVY (calculated)
0.326
Length
805 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGDQAPHSN SNQHPPPPPS PSPLPEREAS FNYDIESMDG GGWRGAGRYA SSDALLRYDD DGPREPLLRK RTMNTTSQIA IVGANVFAIE SLDYEIVEND
101: LFKQDWRSRK KNQIFQYVVL KWALVLLIGL LTGLVGFFNN LAVENIAGFK LVLTGDLMLQ KRYFTAFLAY GGCNLVLGAT AAALCAYIAP AAAGSGIPEV
201: KAYLNGVDAY SILAPSTLFV KIFGSILGVS GGFVLGKEGP MVHTGACIAN LLGQGGSRKY HLTWNWLKYF KNDRDRRDLI TCGAAAGVAA AFRAPVGGVL
301: FALEEAASWW RSALLWRTFF TTAVVAVVLR ALIEFCRKGK CGLFGQGGLI MFDLSSNVPS YGTQDLIAII ILGVIGGVFG GLFNFLLDRI LRVYSIINER
401: GAPSKILLTI TISIITSACS YGLPWLAACS PCPVGSMEEC PTIGRSGNFK SFQCPPGHYN GLASLFFNTN DDAIRNLFSR GTENEFHMSS LFVFFIAIYC
501: LGLVTYGIAV PSGLFIPVIL AGATYGRIVG TLLGPMSDID PGLFALLGAA SFLGGTMRMT VSVCVILLEL TNELHMLPLV MLVLLISKTI ADCFNKGVYD
601: QIVVMKGLPF MEAHAEPYMR HLVASDVVSG PLISFSGVEK VGNIVHALRI TGHNGFPVVD EPPVSEAPEL VGLVLRSHVL VLLSGRNFMK EKVKTSGSFV
701: LRRFGAFDFA KPGSGKGMKI EDLDFTEEEM EMYVDLHPIT NTSPYTVVET MSLAKAAVLF RALGLRHLLV VPKTPGRFPI VGILTRHDLM PEHIHGLFPN
801: LRKSH
101: LFKQDWRSRK KNQIFQYVVL KWALVLLIGL LTGLVGFFNN LAVENIAGFK LVLTGDLMLQ KRYFTAFLAY GGCNLVLGAT AAALCAYIAP AAAGSGIPEV
201: KAYLNGVDAY SILAPSTLFV KIFGSILGVS GGFVLGKEGP MVHTGACIAN LLGQGGSRKY HLTWNWLKYF KNDRDRRDLI TCGAAAGVAA AFRAPVGGVL
301: FALEEAASWW RSALLWRTFF TTAVVAVVLR ALIEFCRKGK CGLFGQGGLI MFDLSSNVPS YGTQDLIAII ILGVIGGVFG GLFNFLLDRI LRVYSIINER
401: GAPSKILLTI TISIITSACS YGLPWLAACS PCPVGSMEEC PTIGRSGNFK SFQCPPGHYN GLASLFFNTN DDAIRNLFSR GTENEFHMSS LFVFFIAIYC
501: LGLVTYGIAV PSGLFIPVIL AGATYGRIVG TLLGPMSDID PGLFALLGAA SFLGGTMRMT VSVCVILLEL TNELHMLPLV MLVLLISKTI ADCFNKGVYD
601: QIVVMKGLPF MEAHAEPYMR HLVASDVVSG PLISFSGVEK VGNIVHALRI TGHNGFPVVD EPPVSEAPEL VGLVLRSHVL VLLSGRNFMK EKVKTSGSFV
701: LRRFGAFDFA KPGSGKGMKI EDLDFTEEEM EMYVDLHPIT NTSPYTVVET MSLAKAAVLF RALGLRHLLV VPKTPGRFPI VGILTRHDLM PEHIHGLFPN
801: LRKSH
001: MDDRHEGDHH DIEVEGGALH GFERKISGIL DDGSVGFRQP LLARNRKNTT SQIAIVGANT CPIESLDYEI FENDFFKQDW RSRKKIEILQ YTFLKWALAF
101: LIGLATGLVG FLNNLGVENI AGFKLLLIGN LMLKEKYFQA FFAFAGCNLI LATAAASLCA FIAPAAAGSG IPEVKAYLNG IDAYSILAPS TLFVKIFGSI
201: FGVAAGFVVG KEGPMVHTGA CIANLLGQGG SKKYRLTWKW LRFFKNDRDR RDLITCGAAA GVAAAFRAPV GGVLFALEEA ASWWRNALLW RTFFTTAVVA
301: VVLRSLIEFC RSGRCGLFGK GGLIMFDVNS GPVLYSTPDL LAIVFLGVIG GVLGSLYNYL VDKVLRTYSI INEKGPRFKI MLVMAVSILS SCCAFGLPWL
401: SQCTPCPIGI EEGKCPSVGR SSIYKSFQCP PNHYNDLSSL LLNTNDDAIR NLFTSRSENE FHISTLAIFF VAVYCLGIIT YGIAIPSGLF IPVILAGASY
501: GRLVGRLLGP VSQLDVGLFS LLGAASFLGG TMRMTVSLCV ILLELTNNLL MLPLVMLVLL ISKTVADCFN RGVYDQIVTM KGLPYMEDHA EPYMRNLVAK
601: DVVSGALISF SRVEKVGVIW QALKMTRHNG FPVIDEPPFT EASELCGIAL RSHLLVLLQG KKFSKQRTTF GSQILRSCKA RDFGKAGLGK GLKIEDLDLS
701: EEEMEMYVDL HPITNTSPYT VLETLSLAKA AILFRQLGLR HLCVVPKTPG RPPIVGILTR HDFMPEHVLG LYPHIDPLK
101: LIGLATGLVG FLNNLGVENI AGFKLLLIGN LMLKEKYFQA FFAFAGCNLI LATAAASLCA FIAPAAAGSG IPEVKAYLNG IDAYSILAPS TLFVKIFGSI
201: FGVAAGFVVG KEGPMVHTGA CIANLLGQGG SKKYRLTWKW LRFFKNDRDR RDLITCGAAA GVAAAFRAPV GGVLFALEEA ASWWRNALLW RTFFTTAVVA
301: VVLRSLIEFC RSGRCGLFGK GGLIMFDVNS GPVLYSTPDL LAIVFLGVIG GVLGSLYNYL VDKVLRTYSI INEKGPRFKI MLVMAVSILS SCCAFGLPWL
401: SQCTPCPIGI EEGKCPSVGR SSIYKSFQCP PNHYNDLSSL LLNTNDDAIR NLFTSRSENE FHISTLAIFF VAVYCLGIIT YGIAIPSGLF IPVILAGASY
501: GRLVGRLLGP VSQLDVGLFS LLGAASFLGG TMRMTVSLCV ILLELTNNLL MLPLVMLVLL ISKTVADCFN RGVYDQIVTM KGLPYMEDHA EPYMRNLVAK
601: DVVSGALISF SRVEKVGVIW QALKMTRHNG FPVIDEPPFT EASELCGIAL RSHLLVLLQG KKFSKQRTTF GSQILRSCKA RDFGKAGLGK GLKIEDLDLS
701: EEEMEMYVDL HPITNTSPYT VLETLSLAKA AILFRQLGLR HLCVVPKTPG RPPIVGILTR HDFMPEHVLG LYPHIDPLK
Arabidopsis Description
CLC-CChloride channel protein CLC-c [Source:UniProtKB/Swiss-Prot;Acc:Q96282]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.