Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES12223 | Sorghum | plasma membrane | 96.48 | 96.12 |
| TraesCS2A01G309900.1 | Wheat | plasma membrane | 88.43 | 87.66 |
| TraesCS2D01G308100.1 | Wheat | plasma membrane | 88.68 | 87.58 |
| TraesCS2B01G326900.1 | Wheat | plasma membrane | 88.43 | 87.33 |
| Zm00001d016855_P002 | Maize | plasma membrane | 87.42 | 83.94 |
| GSMUA_Achr6P07410_001 | Banana | plasma membrane | 80.5 | 83.55 |
| GSMUA_Achr6P24170_001 | Banana | plasma membrane | 76.1 | 83.22 |
| HORVU2Hr1G077080.3 | Barley | mitochondrion, peroxisome, plasma membrane, plastid | 82.14 | 80.22 |
| Zm00001d042651_P001 | Maize | plasma membrane | 69.94 | 70.03 |
| Zm00001d039812_P001 | Maize | plasma membrane | 18.62 | 60.41 |
| Zm00001d002091_P002 | Maize | plasma membrane | 56.73 | 59.5 |
| Zm00001d015702_P001 | Maize | plasma membrane | 47.67 | 58.49 |
| Zm00001d046919_P001 | Maize | plasma membrane | 50.82 | 50.44 |
| Zm00001d015700_P001 | Maize | plasma membrane | 13.33 | 48.18 |
| Zm00001d033597_P004 | Maize | plasma membrane | 45.41 | 46.22 |
| Zm00001d003594_P001 | Maize | plasma membrane | 14.97 | 41.18 |
Protein Annotations
| MapMan:24.2.16 | Gene3D:3.10.580.10 | ProteinID:AQK43826.1 | ProteinID:AQK43827.1 | ProteinID:AQK43828.1 | InterPro:CBS_dom |
| InterPro:Cl-channel_core | InterPro:Cl-channel_volt-gated | InterPro:Cl_channel_pln | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005216 |
| GO:GO:0005247 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0006821 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0034220 | GO:GO:0055085 | GO:GO:1902476 | InterPro:IPR000644 |
| InterPro:IPR014743 | UniProt:K7TKL2 | PFAM:PF00571 | PFAM:PF00654 | PRINTS:PR00762 | PRINTS:PR01120 |
| PFscan:PS51371 | PANTHER:PTHR11689 | PANTHER:PTHR11689:SF109 | SMART:SM00116 | SUPFAM:SSF54631 | SUPFAM:SSF81340 |
| TMHMM:TMhelix | UniParc:UPI000211ECF8 | EnsemblPlantsGene:Zm00001d025474 | EnsemblPlants:Zm00001d025474_P003 | EnsemblPlants:Zm00001d025474_T003 | SEG:seg |
Description
Chloride channel protein CLC-c
Coordinates
chr10:-:119967321..119981337
Molecular Weight (calculated)
86297.4 Da
IEP (calculated)
6.925
GRAVY (calculated)
0.342
Length
795 amino acids
Sequence
(BLAST)
(BLAST)
001: MDANHSPPAQ PERNHGSLNY DIESTDGTWR GAGAWQEQDP SSEALMRYDD DGPREPLLRR RTMNTTSQIA IVGANICPIE SLDYEIVEND LFKQDWRSRK
101: KQQIFQYIVL KWSLVLLIGL CTGLVGFFNN LAVENIAGFK LLLTSDLMLK QRYFTAFLAY GGCNLVLAAA AAAICAYIAP AAAGSGIPEV KAYLNGVDAY
201: AILAPSTLFV KIFGSILGVS AGFVLGKEGP MVHTGACIAN LLGQGGSRKY HLTCNWLRYF KNDRDRRDLI TCGSAAGVAA AFRAPVGGVL FALEEAASWW
301: RSALLWRTFF TTAVVAVVLR GLIQFCRSGK CGLFGQGGLI MFDLSSTVPS YSTQDIIAII VLGIIGGVFG GLFNFLLDRI LRAYSFINER GAPYKILLTV
401: TISIITSACS YGLPWLAPCT PCPADAVEEC PTIGRSGNFK NFQCPPGYYN GLASLFFNTN DDAIRNLFSS GTENEFHMST LFVFFTAIYC LGLVTYGIAV
501: PSGLFIPVIL AGATYGRIVG TLLGPISDLD PGLFALLGAA SFLGGTMRMT VSVCVILLEL TNDLLMLPLV MLVLLISKTI ADSFNKGVYD QIVVMKGLPF
601: LEAHAEPYMT HLVASDVVSG PLISFSGVER VGNIVQALRI TGHNGFPVVD EPPLSEAPEL VGLVLRSHLL VLLKGKGFMK EKMKTSGSFV LERFGAFDFA
701: KPGSGKGLKI EDLDFTDEEM DLYVDLHPIT NTSPYTVVET MSLAKAAVLF RALGLRHMLV VPKTPGRPPI VGILTRHDFI PEHIHGLFPN IHKSH
101: KQQIFQYIVL KWSLVLLIGL CTGLVGFFNN LAVENIAGFK LLLTSDLMLK QRYFTAFLAY GGCNLVLAAA AAAICAYIAP AAAGSGIPEV KAYLNGVDAY
201: AILAPSTLFV KIFGSILGVS AGFVLGKEGP MVHTGACIAN LLGQGGSRKY HLTCNWLRYF KNDRDRRDLI TCGSAAGVAA AFRAPVGGVL FALEEAASWW
301: RSALLWRTFF TTAVVAVVLR GLIQFCRSGK CGLFGQGGLI MFDLSSTVPS YSTQDIIAII VLGIIGGVFG GLFNFLLDRI LRAYSFINER GAPYKILLTV
401: TISIITSACS YGLPWLAPCT PCPADAVEEC PTIGRSGNFK NFQCPPGYYN GLASLFFNTN DDAIRNLFSS GTENEFHMST LFVFFTAIYC LGLVTYGIAV
501: PSGLFIPVIL AGATYGRIVG TLLGPISDLD PGLFALLGAA SFLGGTMRMT VSVCVILLEL TNDLLMLPLV MLVLLISKTI ADSFNKGVYD QIVVMKGLPF
601: LEAHAEPYMT HLVASDVVSG PLISFSGVER VGNIVQALRI TGHNGFPVVD EPPLSEAPEL VGLVLRSHLL VLLKGKGFMK EKMKTSGSFV LERFGAFDFA
701: KPGSGKGLKI EDLDFTDEEM DLYVDLHPIT NTSPYTVVET MSLAKAAVLF RALGLRHMLV VPKTPGRPPI VGILTRHDFI PEHIHGLFPN IHKSH
001: MDDRHEGDHH DIEVEGGALH GFERKISGIL DDGSVGFRQP LLARNRKNTT SQIAIVGANT CPIESLDYEI FENDFFKQDW RSRKKIEILQ YTFLKWALAF
101: LIGLATGLVG FLNNLGVENI AGFKLLLIGN LMLKEKYFQA FFAFAGCNLI LATAAASLCA FIAPAAAGSG IPEVKAYLNG IDAYSILAPS TLFVKIFGSI
201: FGVAAGFVVG KEGPMVHTGA CIANLLGQGG SKKYRLTWKW LRFFKNDRDR RDLITCGAAA GVAAAFRAPV GGVLFALEEA ASWWRNALLW RTFFTTAVVA
301: VVLRSLIEFC RSGRCGLFGK GGLIMFDVNS GPVLYSTPDL LAIVFLGVIG GVLGSLYNYL VDKVLRTYSI INEKGPRFKI MLVMAVSILS SCCAFGLPWL
401: SQCTPCPIGI EEGKCPSVGR SSIYKSFQCP PNHYNDLSSL LLNTNDDAIR NLFTSRSENE FHISTLAIFF VAVYCLGIIT YGIAIPSGLF IPVILAGASY
501: GRLVGRLLGP VSQLDVGLFS LLGAASFLGG TMRMTVSLCV ILLELTNNLL MLPLVMLVLL ISKTVADCFN RGVYDQIVTM KGLPYMEDHA EPYMRNLVAK
601: DVVSGALISF SRVEKVGVIW QALKMTRHNG FPVIDEPPFT EASELCGIAL RSHLLVLLQG KKFSKQRTTF GSQILRSCKA RDFGKAGLGK GLKIEDLDLS
701: EEEMEMYVDL HPITNTSPYT VLETLSLAKA AILFRQLGLR HLCVVPKTPG RPPIVGILTR HDFMPEHVLG LYPHIDPLK
101: LIGLATGLVG FLNNLGVENI AGFKLLLIGN LMLKEKYFQA FFAFAGCNLI LATAAASLCA FIAPAAAGSG IPEVKAYLNG IDAYSILAPS TLFVKIFGSI
201: FGVAAGFVVG KEGPMVHTGA CIANLLGQGG SKKYRLTWKW LRFFKNDRDR RDLITCGAAA GVAAAFRAPV GGVLFALEEA ASWWRNALLW RTFFTTAVVA
301: VVLRSLIEFC RSGRCGLFGK GGLIMFDVNS GPVLYSTPDL LAIVFLGVIG GVLGSLYNYL VDKVLRTYSI INEKGPRFKI MLVMAVSILS SCCAFGLPWL
401: SQCTPCPIGI EEGKCPSVGR SSIYKSFQCP PNHYNDLSSL LLNTNDDAIR NLFTSRSENE FHISTLAIFF VAVYCLGIIT YGIAIPSGLF IPVILAGASY
501: GRLVGRLLGP VSQLDVGLFS LLGAASFLGG TMRMTVSLCV ILLELTNNLL MLPLVMLVLL ISKTVADCFN RGVYDQIVTM KGLPYMEDHA EPYMRNLVAK
601: DVVSGALISF SRVEKVGVIW QALKMTRHNG FPVIDEPPFT EASELCGIAL RSHLLVLLQG KKFSKQRTTF GSQILRSCKA RDFGKAGLGK GLKIEDLDLS
701: EEEMEMYVDL HPITNTSPYT VLETLSLAKA AILFRQLGLR HLCVVPKTPG RPPIVGILTR HDFMPEHVLG LYPHIDPLK
Arabidopsis Description
CLC-CChloride channel protein CLC-c [Source:UniProtKB/Swiss-Prot;Acc:Q96282]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.