Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES01847 | Sorghum | cytosol, peroxisome, plasma membrane | 91.69 | 91.57 |
| HORVU3Hr1G081920.1 | Barley | plasma membrane, plastid | 79.09 | 79.49 |
| TraesCS3D01G379600.1 | Wheat | plasma membrane, plastid | 78.34 | 78.34 |
| TraesCS3A01G390100.1 | Wheat | plasma membrane, plastid | 78.34 | 78.24 |
| TraesCS3B01G418700.1 | Wheat | mitochondrion | 77.83 | 77.74 |
| Os01t0876100-00 | Rice | plasma membrane | 79.47 | 72.36 |
| Zm00001d025474_P003 | Maize | plasma membrane | 70.03 | 69.94 |
| VIT_12s0035g01720.t01 | Wine grape | plasma membrane | 67.51 | 68.98 |
| VIT_07s0130g00400.t01 | Wine grape | cytosol | 67.0 | 68.21 |
| Solyc10g044470.1.1 | Tomato | plasma membrane | 65.62 | 68.19 |
| PGSC0003DMT400064087 | Potato | plasma membrane | 66.37 | 68.0 |
| Solyc01g103140.2.1 | Tomato | plasma membrane | 66.12 | 67.74 |
| PGSC0003DMT400025239 | Potato | plasma membrane | 65.87 | 67.4 |
| Zm00001d016855_P002 | Maize | plasma membrane | 69.9 | 67.03 |
| Bra000596.1-P | Field mustard | plasma membrane | 64.48 | 66.06 |
| CDY16376 | Canola | plasma membrane | 64.48 | 66.06 |
| CDX91539 | Canola | plasma membrane | 64.48 | 66.06 |
| Bra022507.1-P | Field mustard | plasma membrane | 64.48 | 66.06 |
| CDY21447 | Canola | plasma membrane | 64.36 | 65.94 |
| CDX83179 | Canola | plasma membrane | 64.36 | 65.94 |
| AT5G49890.1 | Thale cress | plasma membrane | 64.61 | 65.85 |
| KRH38787 | Soybean | cytosol | 63.6 | 64.01 |
| KRH09287 | Soybean | cytosol, nucleus, plasma membrane | 63.98 | 63.82 |
| Zm00001d039812_P001 | Maize | plasma membrane | 18.39 | 59.59 |
| Zm00001d002091_P002 | Maize | plasma membrane | 53.65 | 56.2 |
| Zm00001d015702_P001 | Maize | plasma membrane | 44.58 | 54.63 |
| Zm00001d046919_P001 | Maize | plasma membrane | 50.13 | 49.69 |
| Zm00001d033597_P004 | Maize | plasma membrane | 43.83 | 44.56 |
| Zm00001d015700_P001 | Maize | plasma membrane | 12.22 | 44.09 |
| Zm00001d003594_P001 | Maize | plasma membrane | 12.59 | 34.6 |
Protein Annotations
| MapMan:24.2.16 | Gene3D:3.10.580.10 | UniProt:A0A1D6N5S1 | InterPro:CBS_dom | InterPro:Cl-channel_core | InterPro:Cl-channel_volt-gated |
| InterPro:Cl_channel_pln | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005216 | GO:GO:0005247 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0006810 |
| GO:GO:0006811 | GO:GO:0006821 | GO:GO:0008150 | GO:GO:0009705 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0034220 | GO:GO:0055085 | GO:GO:1902476 | InterPro:IPR000644 | InterPro:IPR014743 | ProteinID:ONM35969.1 |
| PFAM:PF00571 | PFAM:PF00654 | PRINTS:PR00762 | PRINTS:PR01120 | PFscan:PS51371 | PANTHER:PTHR11689 |
| PANTHER:PTHR11689:SF84 | SUPFAM:SSF54631 | SUPFAM:SSF81340 | TMHMM:TMhelix | UniParc:UPI0004DEC3FD | EnsemblPlantsGene:Zm00001d042651 |
| EnsemblPlants:Zm00001d042651_P001 | EnsemblPlants:Zm00001d042651_T001 | SEG:seg | : | : | : |
Description
Chloride channel protein
Coordinates
chr3:-:175307644..175312509
Molecular Weight (calculated)
85146.3 Da
IEP (calculated)
8.036
GRAVY (calculated)
0.416
Length
794 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPTAGRESW LDGTESSGTT PLETPTATPL ATPISARSVR WEKDVEDAAA GALQRPLLYK RGTNTTSQMA IVGANTCPIE SLDYEIVEND VYNQDWRSRG
101: KLQIFQYQVL KWVLALLVGV VVGLVGFFSN IAVENIAGFK LLLTGDLMLQ NRYLAAFELY IGCNAVLAAA AAALCAYVAP AAAGSGIPEV KAYLNGIDAH
201: SILAPSTLLV KILGSVLGVS AGFVLGKEGP MVHTGSCVAS LLAQGGSRKY GLTWNWIRYF KNDLDRRDLI TCGAAAGVAA AFRAPVGGVL FALEEVTSWW
301: RSALLWRTFS TTAVATMVLH ALITYCRGGH CGLFGKGGLI MFDLSSRQAT YTATDLAAVV LLAVLGGLLG ALFNFLVDRV LRAYSIVNEK GACYKIVLTV
401: TISVITSCCT FGLPWLTACT PCPPELASKC PTIGRSGNFK NFQCPPGQYN ALASLFFNTN DDAIRNLFSA GYDREFGVST LLTFFTTVYT LGLLTYGVAV
501: PSGLFIPVIL SGASFGRLAG TLLGSVSGLD PGLFALLGAA AFLGGTMRMT VSVCVILLEL TNDLLLLPLI MLVLLIAKTV ADCFNKGVYE QIVRMKGLPY
601: LEVHAEPCTR SLVAGDVVSG PLVTFSSVER VGTVVHTLRS TGHNGFPVIE DPPFAPAPEL CGLVLRSHLL VLLQGRIFTS DRVKTGAAEV FRRLAPFDFA
701: KAGSGKGIKV DDLDLTEEEM DMYMDLHPIT NRSPYTVVEN MSLAKAAVLF RGLGLRHMCV LPRTQGRPPV VGILTRHDFM PQYIRGLYPN VLPR
101: KLQIFQYQVL KWVLALLVGV VVGLVGFFSN IAVENIAGFK LLLTGDLMLQ NRYLAAFELY IGCNAVLAAA AAALCAYVAP AAAGSGIPEV KAYLNGIDAH
201: SILAPSTLLV KILGSVLGVS AGFVLGKEGP MVHTGSCVAS LLAQGGSRKY GLTWNWIRYF KNDLDRRDLI TCGAAAGVAA AFRAPVGGVL FALEEVTSWW
301: RSALLWRTFS TTAVATMVLH ALITYCRGGH CGLFGKGGLI MFDLSSRQAT YTATDLAAVV LLAVLGGLLG ALFNFLVDRV LRAYSIVNEK GACYKIVLTV
401: TISVITSCCT FGLPWLTACT PCPPELASKC PTIGRSGNFK NFQCPPGQYN ALASLFFNTN DDAIRNLFSA GYDREFGVST LLTFFTTVYT LGLLTYGVAV
501: PSGLFIPVIL SGASFGRLAG TLLGSVSGLD PGLFALLGAA AFLGGTMRMT VSVCVILLEL TNDLLLLPLI MLVLLIAKTV ADCFNKGVYE QIVRMKGLPY
601: LEVHAEPCTR SLVAGDVVSG PLVTFSSVER VGTVVHTLRS TGHNGFPVIE DPPFAPAPEL CGLVLRSHLL VLLQGRIFTS DRVKTGAAEV FRRLAPFDFA
701: KAGSGKGIKV DDLDLTEEEM DMYMDLHPIT NRSPYTVVEN MSLAKAAVLF RGLGLRHMCV LPRTQGRPPV VGILTRHDFM PQYIRGLYPN VLPR
001: MVEEDLNQIG GNSNYNGEGG DPESNTLNQP LVKANRTLSS TPLALVGAKV SHIESLDYEI NENDLFKHDW RKRSKAQVLQ YVFLKWTLAC LVGLFTGLIA
101: TLINLAVENI AGYKLLAVGH FLTQERYVTG LMVLVGANLG LTLVASVLCV CFAPTAAGPG IPEIKAYLNG VDTPNMFGAT TMIVKIVGSI GAVAAGLDLG
201: KEGPLVHIGS CIASLLGQGG TDNHRIKWRW LRYFNNDRDR RDLITCGSAA GVCAAFRSPV GGVLFALEEV ATWWRSALLW RTFFSTAVVV VVLREFIEIC
301: NSGKCGLFGK GGLIMFDVSH VTYTYHVTDI IPVMLIGVIG GILGSLYNHL LHKVLRLYNL INEKGKIHKV LLSLTVSLFT SVCLYGLPFL AKCKPCDPSI
401: DEICPTNGRS GNFKQFHCPK GYYNDLATLL LTTNDDAVRN LFSSNTPNEF GMGSLWIFFV LYCILGLFTF GIATPSGLFL PIILMGAAYG RMLGAAMGSY
501: TSIDQGLYAV LGAAALMAGS MRMTVSLCVI FLELTNNLLL LPITMIVLLI AKTVGDSFNP SIYDIILHLK GLPFLEANPE PWMRNLTVGE LGDAKPPVVT
601: LQGVEKVSNI VDVLKNTTHN AFPVLDEAEV PQVGLATGAT ELHGLILRAH LVKVLKKRWF LTEKRRTEEW EVREKFPWDE LAEREDNFDD VAITSAEMEM
701: YVDLHPLTNT TPYTVMENMS VAKALVLFRQ VGLRHLLIVP KIQASGMCPV VGILTRQDLR AYNILQAFPL LEKSKGGKTH
101: TLINLAVENI AGYKLLAVGH FLTQERYVTG LMVLVGANLG LTLVASVLCV CFAPTAAGPG IPEIKAYLNG VDTPNMFGAT TMIVKIVGSI GAVAAGLDLG
201: KEGPLVHIGS CIASLLGQGG TDNHRIKWRW LRYFNNDRDR RDLITCGSAA GVCAAFRSPV GGVLFALEEV ATWWRSALLW RTFFSTAVVV VVLREFIEIC
301: NSGKCGLFGK GGLIMFDVSH VTYTYHVTDI IPVMLIGVIG GILGSLYNHL LHKVLRLYNL INEKGKIHKV LLSLTVSLFT SVCLYGLPFL AKCKPCDPSI
401: DEICPTNGRS GNFKQFHCPK GYYNDLATLL LTTNDDAVRN LFSSNTPNEF GMGSLWIFFV LYCILGLFTF GIATPSGLFL PIILMGAAYG RMLGAAMGSY
501: TSIDQGLYAV LGAAALMAGS MRMTVSLCVI FLELTNNLLL LPITMIVLLI AKTVGDSFNP SIYDIILHLK GLPFLEANPE PWMRNLTVGE LGDAKPPVVT
601: LQGVEKVSNI VDVLKNTTHN AFPVLDEAEV PQVGLATGAT ELHGLILRAH LVKVLKKRWF LTEKRRTEEW EVREKFPWDE LAEREDNFDD VAITSAEMEM
701: YVDLHPLTNT TPYTVMENMS VAKALVLFRQ VGLRHLLIVP KIQASGMCPV VGILTRQDLR AYNILQAFPL LEKSKGGKTH
Arabidopsis Description
CLC-BChloride channel protein [Source:UniProtKB/TrEMBL;Acc:A0A178VKG6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.