CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH09287	Soybean	cytosol, nucleus, plasma membrane	95.56	94.72
VIT_07s0130g00400.t01	Wine grape	cytosol	76.3	77.18
Zm00001d042651_P001	Maize	plasma membrane	64.01	63.6
EES01847	Sorghum	cytosol, peroxisome, plasma membrane	64.01	63.52
HORVU3Hr1G081920.1	Barley	plasma membrane, plastid	61.34	61.27
TraesCS3D01G379600.1	Wheat	plasma membrane, plastid	61.34	60.96
TraesCS3B01G418700.1	Wheat	mitochondrion	61.34	60.88
TraesCS3A01G390100.1	Wheat	plasma membrane, plastid	60.84	60.38
KRH20183	Soybean	plasma membrane	56.4	58.17
Os01t0876100-00	Rice	plasma membrane	63.24	57.22
KRH57669	Soybean	plasma membrane	50.19	50.97
KRG94508	Soybean	plasma membrane	50.7	50.63
KRH06955	Soybean	plasma membrane	47.66	50.47
KRH27622	Soybean	plasma membrane	43.85	43.2
KRH77868	Soybean	plasma membrane	43.85	43.2

Protein Annotations

Gene3D:1.10.3080.10	EntrezGene:100777170	MapMan:24.2.16	Gene3D:3.10.580.10	EMBL:ACUP02005874	InterPro:CBS_dom
InterPro:Cl-channel_core	InterPro:Cl-channel_volt-gated	InterPro:Cl_channel_pln	ncoils:Coil	EnsemblPlantsGene:GLYMA_09G157900	GO:GO:0003674
GO:GO:0005215	GO:GO:0005216	GO:GO:0005247	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0006810	GO:GO:0006811	GO:GO:0006821	GO:GO:0008150
GO:GO:0009705	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	GO:GO:1902476	InterPro:IPR000644
InterPro:IPR014743	UniProt:K7LE66	EnsemblPlants:KRH38787	ProteinID:KRH38787	ProteinID:KRH38787.1	ProteinID:KRH38788.1
PFAM:PF00571	PFAM:PF00654	PRINTS:PR00762	PRINTS:PR01120	PFscan:PS51371	PANTHER:PTHR11689
PANTHER:PTHR11689:SF107	SMART:SM00116	SUPFAM:SSF54631	SUPFAM:SSF81340	TMHMM:TMhelix	UniParc:UPI000295389A
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:38107199..38116090

Molecular Weight (calculated)

86031.3 Da

IEP (calculated)

7.206

GRAVY (calculated)

0.344

Length

789 amino acids

Sequence
(BLAST)

001: MMTPTGGEGA EKMDAEDGVN CSDYEHDIEN EESGGYWSGI YDRNMAHTMP LLMKRANTTS QIAIVGANPC PIESLDYEIF DNEILKNDWR SKKKVQIIHY
101: VMLKWGFALL IGLGTGLVGF FNSFAVENIA GFKLLMTTGL MSKHRYLDAF LAYAGANMCL AAAAAALCAF IAPAAAGSGI PEVKAYLNGV DAQNILAPST
201: LFVKIFGSIL GVSAGFVVGK EGPMVHTGAC IASLLGQGGS HKYHLTCTWL RYFKNDRDRR DMITCGAAAG VAAAFRAPVG GVLFALEEAA SWWRSALLWR
301: TFFTTAVVAI VLRVAIQFCA TGKCGLFGEG GLIMYDVSSA NITYSASGIF AVLLLGAIAG ILGSIYNYLV DKVVRTYSII NGKGAFSKIS LVVTIALLTS
401: CCYYFLPWIA KCIRCPSNST VICPSVDESG DYKSFQCPPG YYNDLASLFL NTNDDAIRNL FSPRIIKEFH ITSLFIYFAT IYCLGIITYG IAIPSGLFIP
501: VILAGAAYGR LFGRLFETIT ELDRGLFALL GAASFLGGTM RMTVSLCVIL LELTNDLLLL PLVMLVLLVS KSVADSFNKG VYDQILKIKG LPYLEAHAEP
601: YMRNLVTRDV VSGPLITFSG IEKVANILQA LNTTGHNGFP VIDEPPFSDS PELCGLVLRS HLLVLLKEKI FSRDRGFANQ RIFQRISTLD FGKAGSGKGI
701: KLEDLDIQEE EMDMYVDLHP ITNASPYTVV ETMSLAKAAI LFRQHGLRHM CVVPKSQGRP PVVGILTRHD FMPEHVLGLH PDIMPHKWK

Best Arabidopsis Sequence Match ( AT5G49890.1 )
(BLAST)

001: MDDRHEGDHH DIEVEGGALH GFERKISGIL DDGSVGFRQP LLARNRKNTT SQIAIVGANT CPIESLDYEI FENDFFKQDW RSRKKIEILQ YTFLKWALAF
101: LIGLATGLVG FLNNLGVENI AGFKLLLIGN LMLKEKYFQA FFAFAGCNLI LATAAASLCA FIAPAAAGSG IPEVKAYLNG IDAYSILAPS TLFVKIFGSI
201: FGVAAGFVVG KEGPMVHTGA CIANLLGQGG SKKYRLTWKW LRFFKNDRDR RDLITCGAAA GVAAAFRAPV GGVLFALEEA ASWWRNALLW RTFFTTAVVA
301: VVLRSLIEFC RSGRCGLFGK GGLIMFDVNS GPVLYSTPDL LAIVFLGVIG GVLGSLYNYL VDKVLRTYSI INEKGPRFKI MLVMAVSILS SCCAFGLPWL
401: SQCTPCPIGI EEGKCPSVGR SSIYKSFQCP PNHYNDLSSL LLNTNDDAIR NLFTSRSENE FHISTLAIFF VAVYCLGIIT YGIAIPSGLF IPVILAGASY
501: GRLVGRLLGP VSQLDVGLFS LLGAASFLGG TMRMTVSLCV ILLELTNNLL MLPLVMLVLL ISKTVADCFN RGVYDQIVTM KGLPYMEDHA EPYMRNLVAK
601: DVVSGALISF SRVEKVGVIW QALKMTRHNG FPVIDEPPFT EASELCGIAL RSHLLVLLQG KKFSKQRTTF GSQILRSCKA RDFGKAGLGK GLKIEDLDLS
701: EEEMEMYVDL HPITNTSPYT VLETLSLAKA AILFRQLGLR HLCVVPKTPG RPPIVGILTR HDFMPEHVLG LYPHIDPLK

Arabidopsis Description

CLC-CChloride channel protein CLC-c [Source:UniProtKB/Swiss-Prot;Acc:Q96282]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.