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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 5
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG97393
KRH09922
KRH11076
KRH21197
KRH23409
KRH31520
KRH42923
KRH42926
KRH45251
KRH59035
KRH59036
KRH76090

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G40890.1 KRG97393 AT1G27300.1 21798944
AT5G40890.1 KRH31520 AT1G27300.1 21798944
AT5G40890.1 KRH76090 AT1G27300.1 21798944
AT5G40890.1 KRH09922 AT3G16310.1 21798944
AT5G40890.1 KRH23409 AT3G16310.1 21798944
AT5G40890.1 KRH11076 AT4G19030.1 21798944
AT5G40890.1 KRH21197 AT4G19030.1 21798944
AT5G40890.1 KRH42923 AT4G19030.1 21798944
AT5G40890.1 KRH42926 AT4G19030.1 21798944
AT5G40890.1 KRH45251 AT4G19030.1 21798944
AT5G40890.1 KRH59035 AT4G19030.1 21798944
AT5G40890.1 KRH59036 AT4G19030.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH06955 Soybean plasma membrane 91.14 96.64
KRH57669 Soybean plasma membrane 87.34 88.8
VIT_14s0068g02190.t01 Wine grape plasma membrane 82.78 82.89
Bra030328.1-P Field mustard plasma membrane 78.99 80.41
Bra028478.1-P Field mustard plasma membrane 78.35 80.39
CDX67478 Canola plasma membrane 78.35 80.39
CDY11722 Canola plasma membrane 78.35 80.39
CDY15925 Canola plasma membrane 78.86 80.28
Solyc02g068080.2.1 Tomato peroxisome, plasma membrane, vacuole 79.49 80.1
CDX99630 Canola plasma membrane 78.61 80.03
AT5G40890.1 Thale cress plasma membrane 78.48 80.0
CDX83663 Canola plasma membrane 79.11 79.82
PGSC0003DMT400017962 Potato peroxisome, plasma membrane, vacuole 79.11 79.72
Bra025253.1-P Field mustard plasma membrane 78.99 79.69
AT3G27170.1 Thale cress plasma membrane 78.61 79.62
CDY13685 Canola plasma membrane 78.86 79.57
CDY34173 Canola plasma membrane 78.23 79.23
Bra032985.1-P Field mustard plasma membrane 78.23 78.93
CDY28488 Canola plasma membrane 78.1 78.8
Solyc02g094060.2.1 Tomato plasma membrane 72.15 74.71
PGSC0003DMT400052072 Potato plasma membrane 72.91 74.42
GSMUA_Achr3P16100_001 Banana plasma membrane 66.71 72.69
TraesCS6D01G084300.1 Wheat cytosol, nucleus, plasma membrane 68.1 68.36
TraesCS6B01G126400.1 Wheat plasma membrane 68.1 68.36
TraesCS6B01G126800.1 Wheat plasma membrane 67.34 67.86
TraesCS6A01G098600.1 Wheat plasma membrane 66.58 67.61
TraesCS6D01G084000.2 Wheat plasma membrane 66.84 67.35
Zm00001d046919_P001 Maize plasma membrane 68.23 67.29
EER90148 Sorghum plasma membrane 68.1 67.17
TraesCS6A01G098500.2 Wheat cytosol, peroxisome, plasma membrane 66.08 65.58
HORVU0Hr1G015220.3 Barley cytosol 30.25 58.15
KRH20183 Soybean plasma membrane 50.0 51.63
KRH38787 Soybean cytosol 50.63 50.7
Os12t0438600-01 Rice plasma membrane 9.75 50.66
KRH09287 Soybean cytosol, nucleus, plasma membrane 50.13 49.75
KRH27622 Soybean plasma membrane 42.41 41.82
KRH77868 Soybean plasma membrane 42.28 41.7
Protein Annotations
EntrezGene:100788620MapMan:24.2.16Gene3D:3.10.580.10EMBL:ACUP02011969InterPro:CBS_domInterPro:Cl-channel_core
InterPro:Cl-channel_volt-gatedInterPro:Cl_channel_plnEnsemblPlantsGene:GLYMA_19G089800GO:GO:0003674GO:GO:0005215GO:GO:0005216
GO:GO:0005247GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005773
GO:GO:0006810GO:GO:0006811GO:GO:0006821GO:GO:0008150GO:GO:0009671GO:GO:0009705
GO:GO:0015706GO:GO:0016020GO:GO:0016021GO:GO:0034220GO:GO:0055085GO:GO:1902476
GO:GO:1902600UniProt:I1N7R1InterPro:IPR000644InterPro:IPR014743EnsemblPlants:KRG94508ProteinID:KRG94508
ProteinID:KRG94508.1PFAM:PF00571PFAM:PF00654PRINTS:PR00762PRINTS:PR01120PFscan:PS51371
PANTHER:PTHR11689PANTHER:PTHR11689:SF67SMART:SM00116SUPFAM:SSF54631SUPFAM:SSF81340TMHMM:TMhelix
UniParc:UPI000233F466SEG:seg::::
Description
hypothetical protein
Coordinates
chr19:-:31931694..31936124
Molecular Weight (calculated)
87428.6 Da
IEP (calculated)
7.261
GRAVY (calculated)
0.311
Length
790 amino acids
Sequence
(BLAST)
001: MGEDSGEFGE STKINHKMEN VEREEEIDPE SNPLNEPLLK RNRTLSSNPL ALVGEKVSYI ESLDYEINEN DLFKHDWRSR SRVQVLQYIF LKWLLAFLVG
101: LLTGIIATLI NLAVENIAGY KLLAVLKYIH KERYLTGFLY FTGINFVLTF VAAILCVCFA PTAAGPGIPE IKAYLNGVDT PNMFGATTLI VKIIGSIGAV
201: SAGLDLGKEG PLVHIGSCIA SLLGQGGPDN YRIKWRWLRY FNNDRDRRDL ITCGSSSGVC AAFRAPVGGV LFALEEVATW WRSALLWRTF FSTAVVVVVL
301: RAFIEICHTG KCGLFGEGGL IMFDVSNVTV RYHVMDIVLV VVIGIIGGVL GSLYNHVLHK VLRLYNLINQ KGRIHKLLLS LAVALFTSMC EYGLPFLAKC
401: TPCDPSLPES TCPTNGRSGN FKQFNCPPGY YNDLATLLLT TNDDAVRNIF STNTPQEYQP LSLVIFFVLY CILGLITFGI AVPSGLFLPI ILMGSGYGRL
501: LGIYMGPHTN IDQGLFAVLG AASLMAGSMR MTVSLCVIFL ELTNNLLLLP ITMIVLLIAK TVGDSFNPSI YEIILHLKGL PFMDANPEPW MRNLTVGELV
601: DVKPSVVTLH GVEKVAKIVD VLKNTTHNAF PVMDDGVVPP VVGQANGGTE LHGLILRAHL IQALKKKWFL KERRRTEEWE VREKFTWVEL AEREGSIEEV
701: AVTSEEMEMF VDLHPLTNTT PFTVLESMSV AKAMILFRQV GLRHLLVVPK YQASGVSPVI GILTRQDLLA HNILTVFPHL AISKGREKRN
Best Arabidopsis Sequence Match ( AT3G27170.1 )
(BLAST)
001: MVEEDLNQIG GNSNYNGEGG DPESNTLNQP LVKANRTLSS TPLALVGAKV SHIESLDYEI NENDLFKHDW RKRSKAQVLQ YVFLKWTLAC LVGLFTGLIA
101: TLINLAVENI AGYKLLAVGH FLTQERYVTG LMVLVGANLG LTLVASVLCV CFAPTAAGPG IPEIKAYLNG VDTPNMFGAT TMIVKIVGSI GAVAAGLDLG
201: KEGPLVHIGS CIASLLGQGG TDNHRIKWRW LRYFNNDRDR RDLITCGSAA GVCAAFRSPV GGVLFALEEV ATWWRSALLW RTFFSTAVVV VVLREFIEIC
301: NSGKCGLFGK GGLIMFDVSH VTYTYHVTDI IPVMLIGVIG GILGSLYNHL LHKVLRLYNL INEKGKIHKV LLSLTVSLFT SVCLYGLPFL AKCKPCDPSI
401: DEICPTNGRS GNFKQFHCPK GYYNDLATLL LTTNDDAVRN LFSSNTPNEF GMGSLWIFFV LYCILGLFTF GIATPSGLFL PIILMGAAYG RMLGAAMGSY
501: TSIDQGLYAV LGAAALMAGS MRMTVSLCVI FLELTNNLLL LPITMIVLLI AKTVGDSFNP SIYDIILHLK GLPFLEANPE PWMRNLTVGE LGDAKPPVVT
601: LQGVEKVSNI VDVLKNTTHN AFPVLDEAEV PQVGLATGAT ELHGLILRAH LVKVLKKRWF LTEKRRTEEW EVREKFPWDE LAEREDNFDD VAITSAEMEM
701: YVDLHPLTNT TPYTVMENMS VAKALVLFRQ VGLRHLLIVP KIQASGMCPV VGILTRQDLR AYNILQAFPL LEKSKGGKTH
Arabidopsis Description
CLC-BChloride channel protein [Source:UniProtKB/TrEMBL;Acc:A0A178VKG6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.