Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13685 | Canola | plasma membrane | 98.98 | 98.98 |
| CDY34173 | Canola | plasma membrane | 94.0 | 94.36 |
| CDY28488 | Canola | plasma membrane | 94.13 | 94.13 |
| AT3G27170.1 | Thale cress | plasma membrane | 92.59 | 92.95 |
| CDY11722 | Canola | plasma membrane | 86.08 | 87.53 |
| CDX67478 | Canola | plasma membrane | 85.95 | 87.4 |
| CDY15925 | Canola | plasma membrane | 85.44 | 86.21 |
| CDX99630 | Canola | plasma membrane | 85.19 | 85.95 |
| VIT_14s0068g02190.t01 | Wine grape | plasma membrane | 80.2 | 79.59 |
| KRG94508 | Soybean | plasma membrane | 79.82 | 79.11 |
| KRH06955 | Soybean | plasma membrane | 74.46 | 78.25 |
| Solyc02g068080.2.1 | Tomato | peroxisome, plasma membrane, vacuole | 77.39 | 77.3 |
| PGSC0003DMT400017962 | Potato | peroxisome, plasma membrane, vacuole | 77.39 | 77.3 |
| KRH57669 | Soybean | plasma membrane | 76.63 | 77.22 |
| Solyc02g094060.2.1 | Tomato | plasma membrane | 69.35 | 71.17 |
| GSMUA_Achr3P16100_001 | Banana | plasma membrane | 65.77 | 71.03 |
| PGSC0003DMT400052072 | Potato | plasma membrane | 70.11 | 70.93 |
| TraesCS6A01G098600.1 | Wheat | plasma membrane | 67.56 | 67.99 |
| TraesCS6B01G126400.1 | Wheat | plasma membrane | 67.82 | 67.47 |
| TraesCS6B01G126800.1 | Wheat | plasma membrane | 67.43 | 67.35 |
| TraesCS6D01G084300.1 | Wheat | cytosol, nucleus, plasma membrane | 67.69 | 67.34 |
| TraesCS6D01G084000.2 | Wheat | plasma membrane | 67.31 | 67.22 |
| Zm00001d046919_P001 | Maize | plasma membrane | 68.07 | 66.54 |
| EER90148 | Sorghum | plasma membrane | 68.07 | 66.54 |
| TraesCS6A01G098500.2 | Wheat | cytosol, peroxisome, plasma membrane | 65.77 | 64.7 |
| HORVU0Hr1G015220.3 | Barley | cytosol | 28.35 | 54.01 |
| CDY47559 | Canola | plasma membrane | 51.98 | 53.27 |
| CDY12393 | Canola | plasma membrane | 51.72 | 53.01 |
| CDY16376 | Canola | plasma membrane | 51.98 | 52.52 |
| CDX91539 | Canola | plasma membrane | 51.85 | 52.39 |
| CDY21447 | Canola | plasma membrane | 51.85 | 52.39 |
| CDX83179 | Canola | plasma membrane | 51.72 | 52.26 |
| Os12t0438600-01 | Rice | plasma membrane | 9.45 | 48.68 |
| CDX88226 | Canola | plasma membrane | 42.27 | 41.79 |
| CDY52633 | Canola | plasma membrane | 42.53 | 41.52 |
Protein Annotations
| MapMan:24.2.16 | Gene3D:3.10.580.10 | GO:A0A078D8L7 | InterPro:CBS_dom | EnsemblPlants:CDX83663 | ProteinID:CDX83663 |
| ProteinID:CDX83663.1 | InterPro:Cl-channel_core | InterPro:Cl-channel_volt-gated | InterPro:Cl_channel_pln | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005247 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006821 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00139360001 | InterPro:IPR000644 | InterPro:IPR014743 | PFAM:PF00571 | PFAM:PF00654 |
| PRINTS:PR00762 | PRINTS:PR01120 | PFscan:PS51371 | PANTHER:PTHR11689 | PANTHER:PTHR11689:SF67 | SMART:SM00116 |
| SUPFAM:SSF54631 | SUPFAM:SSF81340 | TMHMM:TMhelix | UniParc:UPI0004EEBFD3 | SEG:seg | : |
Description
BnaC07g24030D
Coordinates
chrLK031833:+:1473927..1476657
Molecular Weight (calculated)
86285.8 Da
IEP (calculated)
7.655
GRAVY (calculated)
0.254
Length
783 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEDLHQIVN SCNYNGEDEE QGDPESNTLN QPLVKANRTL SSTPLALVGT KVSHIESLDY EINENDLFKH DWRKRSKTQV LQYIFLKWTF ACLIGLFTGL
101: IATLINLAVE NIAGYKLLAV GHFLAQERYV TGLMVFAGGN LGLTLVATVL CVCFAPTAAG PGIPEIKAYL NGIDTPNMFG ATTMIVKIIG SIGAVAAGLD
201: LGKEGPLVHI GTCIASLLGQ GGPDNHRLKW RWLRYFNNDR DRRDLITCGS AAGVCAAFRS PVGGVLFALE EVATWWRSAL LWRTFFSTAV VVVVLRAFIE
301: ICNSGKCGLF GRGGLIMFDV SHVTYTYHAT DIIPVMLIGV IGGVLGSLYN HFLHKVLRLY NLINQKGKIH KVLLALTVSL FTSVCLYGLP FLAKCTPCDP
401: SIEERCPTNG RSGNFKQFHC PKGYYSDLAT LLLTTNDDAV RNIFSSNTPN EFSMGSLWIF FVLYCILGLF TFGIATPSGL FLPIILMGSA YGRMLGGLMG
501: SYTSIDQGLY AVLGAASLMA GSMRMTVSLC VIFLELTNNL LLLPITMIVL LIAKTVGDSF NPSIYDIILH LKGLPFLEAN PEPWMRNLSV GELGDAKPPV
601: VTLQGVEKVA KIVDVLRNTT HNAFPVLDEA EVPPQVGLGT GAIELHGLIL RAHLVKVLKK RWFLTEKRRT EEWEVREKFP WDELAEREDN FDDVAITSSE
701: MQMYVDLHPL TNTTPYTVME NMSVAKALVL FRQVGLRHLL IVPRIQASGR SPVVGILTRQ DLRACNILQA FPHLEKSKGR KAH
101: IATLINLAVE NIAGYKLLAV GHFLAQERYV TGLMVFAGGN LGLTLVATVL CVCFAPTAAG PGIPEIKAYL NGIDTPNMFG ATTMIVKIIG SIGAVAAGLD
201: LGKEGPLVHI GTCIASLLGQ GGPDNHRLKW RWLRYFNNDR DRRDLITCGS AAGVCAAFRS PVGGVLFALE EVATWWRSAL LWRTFFSTAV VVVVLRAFIE
301: ICNSGKCGLF GRGGLIMFDV SHVTYTYHAT DIIPVMLIGV IGGVLGSLYN HFLHKVLRLY NLINQKGKIH KVLLALTVSL FTSVCLYGLP FLAKCTPCDP
401: SIEERCPTNG RSGNFKQFHC PKGYYSDLAT LLLTTNDDAV RNIFSSNTPN EFSMGSLWIF FVLYCILGLF TFGIATPSGL FLPIILMGSA YGRMLGGLMG
501: SYTSIDQGLY AVLGAASLMA GSMRMTVSLC VIFLELTNNL LLLPITMIVL LIAKTVGDSF NPSIYDIILH LKGLPFLEAN PEPWMRNLSV GELGDAKPPV
601: VTLQGVEKVA KIVDVLRNTT HNAFPVLDEA EVPPQVGLGT GAIELHGLIL RAHLVKVLKK RWFLTEKRRT EEWEVREKFP WDELAEREDN FDDVAITSSE
701: MQMYVDLHPL TNTTPYTVME NMSVAKALVL FRQVGLRHLL IVPRIQASGR SPVVGILTRQ DLRACNILQA FPHLEKSKGR KAH
001: MVEEDLNQIG GNSNYNGEGG DPESNTLNQP LVKANRTLSS TPLALVGAKV SHIESLDYEI NENDLFKHDW RKRSKAQVLQ YVFLKWTLAC LVGLFTGLIA
101: TLINLAVENI AGYKLLAVGH FLTQERYVTG LMVLVGANLG LTLVASVLCV CFAPTAAGPG IPEIKAYLNG VDTPNMFGAT TMIVKIVGSI GAVAAGLDLG
201: KEGPLVHIGS CIASLLGQGG TDNHRIKWRW LRYFNNDRDR RDLITCGSAA GVCAAFRSPV GGVLFALEEV ATWWRSALLW RTFFSTAVVV VVLREFIEIC
301: NSGKCGLFGK GGLIMFDVSH VTYTYHVTDI IPVMLIGVIG GILGSLYNHL LHKVLRLYNL INEKGKIHKV LLSLTVSLFT SVCLYGLPFL AKCKPCDPSI
401: DEICPTNGRS GNFKQFHCPK GYYNDLATLL LTTNDDAVRN LFSSNTPNEF GMGSLWIFFV LYCILGLFTF GIATPSGLFL PIILMGAAYG RMLGAAMGSY
501: TSIDQGLYAV LGAAALMAGS MRMTVSLCVI FLELTNNLLL LPITMIVLLI AKTVGDSFNP SIYDIILHLK GLPFLEANPE PWMRNLTVGE LGDAKPPVVT
601: LQGVEKVSNI VDVLKNTTHN AFPVLDEAEV PQVGLATGAT ELHGLILRAH LVKVLKKRWF LTEKRRTEEW EVREKFPWDE LAEREDNFDD VAITSAEMEM
701: YVDLHPLTNT TPYTVMENMS VAKALVLFRQ VGLRHLLIVP KIQASGMCPV VGILTRQDLR AYNILQAFPL LEKSKGGKTH
101: TLINLAVENI AGYKLLAVGH FLTQERYVTG LMVLVGANLG LTLVASVLCV CFAPTAAGPG IPEIKAYLNG VDTPNMFGAT TMIVKIVGSI GAVAAGLDLG
201: KEGPLVHIGS CIASLLGQGG TDNHRIKWRW LRYFNNDRDR RDLITCGSAA GVCAAFRSPV GGVLFALEEV ATWWRSALLW RTFFSTAVVV VVLREFIEIC
301: NSGKCGLFGK GGLIMFDVSH VTYTYHVTDI IPVMLIGVIG GILGSLYNHL LHKVLRLYNL INEKGKIHKV LLSLTVSLFT SVCLYGLPFL AKCKPCDPSI
401: DEICPTNGRS GNFKQFHCPK GYYNDLATLL LTTNDDAVRN LFSSNTPNEF GMGSLWIFFV LYCILGLFTF GIATPSGLFL PIILMGAAYG RMLGAAMGSY
501: TSIDQGLYAV LGAAALMAGS MRMTVSLCVI FLELTNNLLL LPITMIVLLI AKTVGDSFNP SIYDIILHLK GLPFLEANPE PWMRNLTVGE LGDAKPPVVT
601: LQGVEKVSNI VDVLKNTTHN AFPVLDEAEV PQVGLATGAT ELHGLILRAH LVKVLKKRWF LTEKRRTEEW EVREKFPWDE LAEREDNFDD VAITSAEMEM
701: YVDLHPLTNT TPYTVMENMS VAKALVLFRQ VGLRHLLIVP KIQASGMCPV VGILTRQDLR AYNILQAFPL LEKSKGGKTH
Arabidopsis Description
CLC-BChloride channel protein [Source:UniProtKB/TrEMBL;Acc:A0A178VKG6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.