CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra038948.1-P	Field mustard	plasma membrane	98.95	98.95
CDY47559	Canola	plasma membrane	98.82	98.82
AT5G33280.1	Thale cress	plasma membrane	90.71	90.59
VIT_11s0118g00220.t01	Wine grape	plasma membrane	76.31	75.52
PGSC0003DMT400078919	Potato	plasma membrane	72.91	72.62
KRH20183	Soybean	plasma membrane	72.51	72.42
Solyc07g007690.2.1	Tomato	plasma membrane	72.38	70.18
Zm00001d002091_P002	Maize	plasma membrane	64.92	65.44
GSMUA_Achr5P23490_001	Banana	plasma membrane	66.75	64.89
Zm00001d039812_P001	Maize	plasma membrane	20.55	64.08
GSMUA_Achr6P02920_001	Banana	plasma membrane	63.35	64.02
EES11540	Sorghum	plasma membrane	66.88	62.78
GSMUA_Achr3P13250_001	Banana	cytosol, peroxisome, plasma membrane	62.57	61.36
Os08t0300300-01	Rice	plasma membrane	63.87	61.31
TraesCS2B01G546000.1	Wheat	plasma membrane	64.79	60.59
TraesCS2D01G519000.2	Wheat	plasma membrane	64.79	60.51
TraesCS2A01G517500.3	Wheat	plasma membrane	64.66	60.1
TraesCS5A01G449500.2	Wheat	plasma membrane	59.03	59.89
Zm00001d015702_P001	Maize	plasma membrane	50.52	59.57
EES06435	Sorghum	plasma membrane	61.52	59.27
TraesCS5D01G456000.1	Wheat	plasma membrane	61.26	59.09
TraesCS5B01G457100.1	Wheat	plasma membrane	61.26	59.09
GSMUA_Achr1P26050_001	Banana	plasma membrane	59.42	58.81
CDY21447	Canola	plasma membrane	57.85	57.03
CDX83179	Canola	plasma membrane	57.72	56.9
CDY16376	Canola	plasma membrane	57.59	56.77
CDX91539	Canola	plasma membrane	57.46	56.65
CDY15925	Canola	plasma membrane	53.4	52.58
CDX67478	Canola	plasma membrane	52.88	52.47
CDY11722	Canola	plasma membrane	52.88	52.47
CDX99630	Canola	plasma membrane	53.27	52.45
CDY34173	Canola	plasma membrane	52.88	51.79
CDX83663	Canola	plasma membrane	53.01	51.72
CDY13685	Canola	plasma membrane	52.75	51.47
CDY28488	Canola	plasma membrane	52.49	51.21
HORVU5Hr1G107380.2	Barley	plastid	56.54	51.12
Zm00001d015700_P001	Maize	plasma membrane	14.53	50.45
CDX88226	Canola	plasma membrane	45.29	43.69
CDY52633	Canola	plasma membrane	45.42	43.27

Protein Annotations

MapMan:24.2.16	Gene3D:3.10.580.10	GO:A0A078FJV3	UniProt:A0A078FJV3	InterPro:CBS_dom	EnsemblPlants:CDY12393
ProteinID:CDY12393	ProteinID:CDY12393.1	InterPro:Cl-channel_core	InterPro:Cl-channel_volt-gated	InterPro:Cl_channel_pln	GO:GO:0003674
GO:GO:0005215	GO:GO:0005216	GO:GO:0005247	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811
GO:GO:0006821	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0055085
GO:GO:1902476	EnsemblPlantsGene:GSBRNA2T00061617001	InterPro:IPR000644	InterPro:IPR014743	PFAM:PF00571	PFAM:PF00654
PRINTS:PR00762	PRINTS:PR01120	PFscan:PS51371	PANTHER:PTHR11689	PANTHER:PTHR11689:SF66	SMART:SM00116
SUPFAM:SSF54631	SUPFAM:SSF81340	TMHMM:TMhelix	UniParc:UPI0004EF0380	SEG:seg	:

Description

BnaC08g08120DChloride channel protein [Source:UniProtKB/TrEMBL;Acc:A0A078FJV3]

Coordinates

chrLK032021:-:650603..653926

Molecular Weight (calculated)

83908.3 Da

IEP (calculated)

8.679

GRAVY (calculated)

0.461

Length

764 amino acids

Sequence
(BLAST)

001: MPDSTTEDSV AVALLPSLRH ATNSSSQVAI VGSNLCPVES LDYEIAENDF FKQDWRARSK TQIFQYVFMK WLLCFFVGII VSLIGFTNNL AVENLAGVKF
101: VVTSNMMLAG RYSMGFFVFT VTNLLLTLFA SVITAFVAPA AAGSGIPEVK AYLNGVDAPE IFSLRTLLVK IIGNISAVSG SLLIGKAGPM VHTGACVASI
201: LGQGGSKRYG LTWRWLRYFN NDRDRRDLVT CGSAAGIAAS FRAPVGGVLF ALEEMSSWWR SALLWRIFFS TAVVAIVLRA LIDVCLSGKC GLFGKGGLIV
301: FDVYSENASY HLGDVLPVLL LGFFGGILGS IYNFLLEKVL RAYNYIYEKG VAWKIILACA ISIFTSCLLF GLPFLASCQP CPADALEECP TIGRSGNFKK
401: YQCPPGHYND LASLIFNTND DAIKNLFSKN TDFEFHYLSV LVFFITCFFL SILSYGIVAP AGLFVPVIVT GASYGRFVGM LLGSKNLNDG LYAVLGAASF
501: LGGSMRMTVS LCVILLELTN NLLLLPMMMV VLLISKTVAD AFNANIYNLI MKIKGFPYLH SHVEPYMRQL TVGDVVTGPL QVFKGIEKIE TIVHVLKTTN
601: HNGFPVVDGP PLAPASVLYG LILRDHILTL LKKRVFLSSP VAFDSNTLAQ FKADEFAKKG SGRGDRIEDV ELSEEELNMY LDLHPFSNAS PYTVLETMSL
701: AKALVLFREV GLRHILVIPK SSNRPPLVGI LTRHDFMPEH ILGLRPTLSR SRWKRLRIRL PFLS

Best Arabidopsis Sequence Match ( AT5G33280.1 )
(BLAST)

001: MPNSTTEDSV AVPLLPSLRR ATNSTSQVAI VGANVCPIES LDYEIAENDF FKQDWRGRSK VEIFQYVFMK WLLCFCIGII VSLIGFANNL AVENLAGVKF
101: VVTSNMMIAG RFAMGFVVFS VTNLILTLFA SVITAFVAPA AAGSGIPEVK AYLNGVDAPE IFSLRTLIIK IIGNISAVSA SLLIGKAGPM VHTGACVASI
201: LGQGGSKRYR LTWRWLRFFK NDRDRRDLVT CGAAAGIAAS FRAPVGGVLF ALEEMSSWWR SALLWRIFFS TAVVAIVLRA LIDVCLSGKC GLFGKGGLIM
301: FDVYSENASY HLGDVLPVLL LGVVGGILGS LYNFLLDKVL RAYNYIYEKG VTWKILLACA ISIFTSCLLF GLPFLASCQP CPVDALEECP TIGRSGNFKK
401: YQCPPGHYND LASLIFNTND DAIKNLFSKN TDFEFHYFSV LVFFVTCFFL SIFSYGIVAP AGLFVPVIVT GASYGRFVGM LLGSNSNLNH GLFAVLGAAS
501: FLGGTMRMTV STCVILLELT NNLLLLPMMM VVLLISKTVA DGFNANIYNL IMKLKGFPYL YSHAEPYMRQ LLVGDVVTGP LQVFNGIEKV ETIVHVLKTT
601: NHNGFPVVDG PPLAAAPVLH GLILRAHILT LLKKRVFMPS PVACDSNTLS QFKAEEFAKK GSGRSDKIED VELSEEELNM YLDLHPFSNA SPYTVVETMS
701: LAKALILFRE VGIRHLLVIP KTSNRPPVVG ILTRHDFMPE HILGLHPSVS RSKWKRLRIR LPFFS

Arabidopsis Description

CLC-GPutative chloride channel-like protein CLC-g [Source:UniProtKB/Swiss-Prot;Acc:P60300]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.