Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- plasma membrane 5
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g007690.2.1 | Tomato | plasma membrane | 97.39 | 94.8 |
| VIT_11s0118g00220.t01 | Wine grape | plasma membrane | 77.05 | 76.55 |
| AT5G33280.1 | Thale cress | plasma membrane | 73.27 | 73.46 |
| Bra038948.1-P | Field mustard | plasma membrane | 73.01 | 73.3 |
| CDY47559 | Canola | plasma membrane | 73.01 | 73.3 |
| KRH20183 | Soybean | plasma membrane | 72.88 | 73.07 |
| CDY12393 | Canola | plasma membrane | 72.62 | 72.91 |
| GSMUA_Achr5P23490_001 | Banana | plasma membrane | 69.49 | 67.81 |
| Zm00001d039812_P001 | Maize | plasma membrane | 21.51 | 67.35 |
| GSMUA_Achr6P02920_001 | Banana | plasma membrane | 65.97 | 66.93 |
| Zm00001d002091_P002 | Maize | plasma membrane | 65.97 | 66.75 |
| GSMUA_Achr3P13250_001 | Banana | cytosol, peroxisome, plasma membrane | 65.45 | 64.44 |
| EES11540 | Sorghum | plasma membrane | 68.32 | 64.37 |
| TraesCS2D01G519000.2 | Wheat | plasma membrane | 67.14 | 62.96 |
| TraesCS2B01G546000.1 | Wheat | plasma membrane | 66.88 | 62.79 |
| TraesCS2A01G517500.3 | Wheat | plasma membrane | 67.28 | 62.77 |
| Os08t0300300-01 | Rice | plasma membrane | 64.41 | 62.06 |
| TraesCS5A01G449500.2 | Wheat | plasma membrane | 60.63 | 61.75 |
| Zm00001d015702_P001 | Maize | plasma membrane | 52.15 | 61.73 |
| PGSC0003DMT400064087 | Potato | plasma membrane | 62.06 | 61.42 |
| EES06435 | Sorghum | plasma membrane | 63.49 | 61.41 |
| PGSC0003DMT400025239 | Potato | plasma membrane | 61.93 | 61.21 |
| GSMUA_Achr1P26050_001 | Banana | plasma membrane | 61.28 | 60.88 |
| TraesCS5D01G456000.1 | Wheat | plasma membrane | 62.32 | 60.35 |
| TraesCS5B01G457100.1 | Wheat | plasma membrane | 62.19 | 60.23 |
| Zm00001d015700_P001 | Maize | plasma membrane | 14.99 | 52.27 |
| PGSC0003DMT400017962 | Potato | peroxisome, plasma membrane, vacuole | 53.32 | 52.17 |
| HORVU5Hr1G107380.2 | Barley | plastid | 56.19 | 51.01 |
| PGSC0003DMT400052072 | Potato | plasma membrane | 50.72 | 50.26 |
Protein Annotations
| EntrezGene:102605465 | MapMan:24.2.16 | Gene3D:3.10.580.10 | InterPro:CBS_dom | InterPro:Cl-channel_core | InterPro:Cl-channel_volt-gated |
| InterPro:Cl_channel_pln | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005216 | GO:GO:0005247 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0006811 | GO:GO:0006821 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0034220 | GO:GO:0055085 | GO:GO:1902476 | InterPro:IPR000644 | InterPro:IPR014743 | UniProt:M1D0Y1 |
| PFAM:PF00571 | PFAM:PF00654 | EnsemblPlantsGene:PGSC0003DMG400030708 | PGSC:PGSC0003DMG400030708 | EnsemblPlants:PGSC0003DMT400078919 | PRINTS:PR00762 |
| PRINTS:PR01120 | PFscan:PS51371 | PANTHER:PTHR11689 | PANTHER:PTHR11689:SF66 | SUPFAM:SSF54631 | SUPFAM:SSF81340 |
| TMHMM:TMhelix | UniParc:UPI000294A810 | RefSeq:XP_006359489.1 | RefSeq:XP_015169931.1 | SEG:seg | : |
Description
Chloride channel clc [Source:PGSC_GENE;Acc:PGSC0003DMG400030708]
Coordinates
chr7:+:3627955..3635857
Molecular Weight (calculated)
84389.9 Da
IEP (calculated)
8.700
GRAVY (calculated)
0.389
Length
767 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEDEESLTH PLLNSLSRST SNNTSQVAIV GSSVSPIESL DYEIMENDYF KQDWRRGEKI QILQYVSMKW MMCFFIGLLV GLVGFCNNLA VENIAGMKFV
101: VTSDLMRARR YTTAFLVFAS SNFGLTLFAG LITAFIAPEA AGSGIPEVKA YLNGVDAPAI FSLRTLFVKI VGSISAVSGS LVIGKAGPMV HTGACIAALI
201: GQGGSQKYGL TWKWLKYFKN DRDRRDLVTC GSAAGMAAAF RAPVGGLLFA LEEMASWWRS ALLWRAFFTT AVVAIVLRAL IDVCLSGKCG LFGKGGLIMF
301: DVTSANVAYQ IWDVPPVLLL AVIGGIWASL YNFLQDRVLR IYNRINERRA AYKIVLALTV SIFTSCLLFG LPWLAPCRPC PSDTSEPCPT IGRNGNYKKF
401: QCPPGHYNDL ASLFFNTNDD AIKNLFSKNT DAEFHPFSML IFFITCFFLS IFSYGIVAPA GLFVPVIVTG AAYGRFIGMM FGSHSTLNHG LFAVLGSASF
501: LGGSMRMTVS LCVIILELTN NLLLLPLMML VLLISKTVAD AFNGNIYDLI MRAKGFPYLE RHAEPYLRQL SVSDVVTGPL QFFNGIEKVG NIVHVLKTTG
601: HNGFPVVDEP PHSVAPVLFG LVLRAHLVTL LKKKAFLQNP VPAGVDTFAQ FSADDFAKKG LDHGDRVEDI QLADEEMDMF IDLHPFCNTS PFTVVETMSL
701: AKALMLFREV GLRHLLVIPK VSGRIPVVGI ITRHDFMPEH VLSLHPSLAK SKWKRLRVKL PRGVKII
101: VTSDLMRARR YTTAFLVFAS SNFGLTLFAG LITAFIAPEA AGSGIPEVKA YLNGVDAPAI FSLRTLFVKI VGSISAVSGS LVIGKAGPMV HTGACIAALI
201: GQGGSQKYGL TWKWLKYFKN DRDRRDLVTC GSAAGMAAAF RAPVGGLLFA LEEMASWWRS ALLWRAFFTT AVVAIVLRAL IDVCLSGKCG LFGKGGLIMF
301: DVTSANVAYQ IWDVPPVLLL AVIGGIWASL YNFLQDRVLR IYNRINERRA AYKIVLALTV SIFTSCLLFG LPWLAPCRPC PSDTSEPCPT IGRNGNYKKF
401: QCPPGHYNDL ASLFFNTNDD AIKNLFSKNT DAEFHPFSML IFFITCFFLS IFSYGIVAPA GLFVPVIVTG AAYGRFIGMM FGSHSTLNHG LFAVLGSASF
501: LGGSMRMTVS LCVIILELTN NLLLLPLMML VLLISKTVAD AFNGNIYDLI MRAKGFPYLE RHAEPYLRQL SVSDVVTGPL QFFNGIEKVG NIVHVLKTTG
601: HNGFPVVDEP PHSVAPVLFG LVLRAHLVTL LKKKAFLQNP VPAGVDTFAQ FSADDFAKKG LDHGDRVEDI QLADEEMDMF IDLHPFCNTS PFTVVETMSL
701: AKALMLFREV GLRHLLVIPK VSGRIPVVGI ITRHDFMPEH VLSLHPSLAK SKWKRLRVKL PRGVKII
001: MPNSTTEDSV AVPLLPSLRR ATNSTSQVAI VGANVCPIES LDYEIAENDF FKQDWRGRSK VEIFQYVFMK WLLCFCIGII VSLIGFANNL AVENLAGVKF
101: VVTSNMMIAG RFAMGFVVFS VTNLILTLFA SVITAFVAPA AAGSGIPEVK AYLNGVDAPE IFSLRTLIIK IIGNISAVSA SLLIGKAGPM VHTGACVASI
201: LGQGGSKRYR LTWRWLRFFK NDRDRRDLVT CGAAAGIAAS FRAPVGGVLF ALEEMSSWWR SALLWRIFFS TAVVAIVLRA LIDVCLSGKC GLFGKGGLIM
301: FDVYSENASY HLGDVLPVLL LGVVGGILGS LYNFLLDKVL RAYNYIYEKG VTWKILLACA ISIFTSCLLF GLPFLASCQP CPVDALEECP TIGRSGNFKK
401: YQCPPGHYND LASLIFNTND DAIKNLFSKN TDFEFHYFSV LVFFVTCFFL SIFSYGIVAP AGLFVPVIVT GASYGRFVGM LLGSNSNLNH GLFAVLGAAS
501: FLGGTMRMTV STCVILLELT NNLLLLPMMM VVLLISKTVA DGFNANIYNL IMKLKGFPYL YSHAEPYMRQ LLVGDVVTGP LQVFNGIEKV ETIVHVLKTT
601: NHNGFPVVDG PPLAAAPVLH GLILRAHILT LLKKRVFMPS PVACDSNTLS QFKAEEFAKK GSGRSDKIED VELSEEELNM YLDLHPFSNA SPYTVVETMS
701: LAKALILFRE VGIRHLLVIP KTSNRPPVVG ILTRHDFMPE HILGLHPSVS RSKWKRLRIR LPFFS
101: VVTSNMMIAG RFAMGFVVFS VTNLILTLFA SVITAFVAPA AAGSGIPEVK AYLNGVDAPE IFSLRTLIIK IIGNISAVSA SLLIGKAGPM VHTGACVASI
201: LGQGGSKRYR LTWRWLRFFK NDRDRRDLVT CGAAAGIAAS FRAPVGGVLF ALEEMSSWWR SALLWRIFFS TAVVAIVLRA LIDVCLSGKC GLFGKGGLIM
301: FDVYSENASY HLGDVLPVLL LGVVGGILGS LYNFLLDKVL RAYNYIYEKG VTWKILLACA ISIFTSCLLF GLPFLASCQP CPVDALEECP TIGRSGNFKK
401: YQCPPGHYND LASLIFNTND DAIKNLFSKN TDFEFHYFSV LVFFVTCFFL SIFSYGIVAP AGLFVPVIVT GASYGRFVGM LLGSNSNLNH GLFAVLGAAS
501: FLGGTMRMTV STCVILLELT NNLLLLPMMM VVLLISKTVA DGFNANIYNL IMKLKGFPYL YSHAEPYMRQ LLVGDVVTGP LQVFNGIEKV ETIVHVLKTT
601: NHNGFPVVDG PPLAAAPVLH GLILRAHILT LLKKRVFMPS PVACDSNTLS QFKAEEFAKK GSGRSDKIED VELSEEELNM YLDLHPFSNA SPYTVVETMS
701: LAKALILFRE VGIRHLLVIP KTSNRPPVVG ILTRHDFMPE HILGLHPSVS RSKWKRLRIR LPFFS
Arabidopsis Description
CLC-GPutative chloride channel-like protein CLC-g [Source:UniProtKB/Swiss-Prot;Acc:P60300]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.