Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G457100.1 | Wheat | plasma membrane | 79.76 | 85.1 |
| TraesCS5D01G456000.1 | Wheat | plasma membrane | 79.64 | 84.97 |
| TraesCS5A01G449500.2 | Wheat | plasma membrane | 74.56 | 83.67 |
| Zm00001d015702_P001 | Maize | plasma membrane | 62.84 | 81.94 |
| Os08t0300300-01 | Rice | plasma membrane | 72.07 | 76.51 |
| EES06435 | Sorghum | plasma membrane | 70.3 | 74.91 |
| GSMUA_Achr3P13250_001 | Banana | cytosol, peroxisome, plasma membrane | 56.21 | 60.98 |
| GSMUA_Achr1P26050_001 | Banana | plasma membrane | 54.56 | 59.72 |
| AT5G33280.1 | Thale cress | plasma membrane | 51.95 | 57.39 |
| Bra038948.1-P | Field mustard | plasma membrane | 51.12 | 56.54 |
| CDY12393 | Canola | plasma membrane | 51.12 | 56.54 |
| CDY47559 | Canola | plasma membrane | 51.01 | 56.41 |
| PGSC0003DMT400078919 | Potato | plasma membrane | 51.01 | 56.19 |
| VIT_11s0118g00220.t01 | Wine grape | plasma membrane | 51.12 | 55.96 |
| KRH20183 | Soybean | plasma membrane | 49.82 | 55.03 |
| Solyc07g007690.2.1 | Tomato | plasma membrane | 50.65 | 54.31 |
| HORVU2Hr1G077080.3 | Barley | mitochondrion, peroxisome, plasma membrane, plastid | 47.22 | 49.02 |
| HORVU3Hr1G081920.1 | Barley | plasma membrane, plastid | 44.02 | 47.09 |
| Zm00001d015700_P001 | Maize | plasma membrane | 11.01 | 42.27 |
| HORVU0Hr1G040330.16 | Barley | plasma membrane | 27.22 | 39.12 |
| HORVU4Hr1G005590.4 | Barley | plasma membrane | 8.4 | 33.02 |
| HORVU0Hr1G015220.3 | Barley | cytosol | 14.67 | 30.17 |
Protein Annotations
| Gene3D:1.10.3080.10 | MapMan:24.2.16 | Gene3D:3.10.580.10 | UniProt:A0A287SN20 | InterPro:CBS_dom | InterPro:Cl-channel_core |
| InterPro:Cl-channel_volt-gated | InterPro:Cl_channel_pln | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005247 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0006811 | GO:GO:0006821 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0055085 | GO:GO:1902476 | EnsemblPlantsGene:HORVU5Hr1G107380 | EnsemblPlants:HORVU5Hr1G107380.2 | InterPro:IPR000644 | InterPro:IPR014743 |
| PFAM:PF00571 | PFAM:PF00654 | PRINTS:PR00762 | PRINTS:PR01120 | PFscan:PS51371 | PANTHER:PTHR11689 |
| PANTHER:PTHR11689:SF97 | SMART:SM00116 | SUPFAM:SSF54631 | SUPFAM:SSF81340 | TMHMM:TMhelix | UniParc:UPI000B46B981 |
| SEG:seg | : | : | : | : | : |
Description
Chloride channel protein [Source:UniProtKB/TrEMBL;Acc:A0A287SN20]
Coordinates
chrchr5H:+:626686763..626693177
Molecular Weight (calculated)
91655.0 Da
IEP (calculated)
10.369
GRAVY (calculated)
0.165
Length
845 amino acids
Sequence
(BLAST)
(BLAST)
001: KKIHTPALPV PITLRPPSWT PGSLLVKPPP FCPGPPPLQL QLQLQLQAPP RWPWRPRLLR GRTSSRRTTS SGRPSRGPFS TAAPPTTSPR WPWSAPRPAP
101: SRASTTRSSR TTCSTRTGGR GPRRTRCGTW CSNGPSASPS ASSPASSASS STSPSRTSPD SSTPPSPPSW SPAGINKCTF WVFAGANLAL LLLATAITAS
201: VSPAAGGSGI PEVKAYLNGV DAPNIFSLRT LAVKVIGNIA AVSSSLHVGK AGPMVHTGAC IAAIFGQGGS RRYGLTWRWL RYFKNDRDRR DLVTIGAGAG
301: VSAAFRAPVG GVLFALESLS SWWRSALIWR SFFTTAVVAV VLRLFVELCG TGRCGMFGKG GLIMYDVSTL FEDLMTYHLK DIPIVVLIGV IGAVLGAFYN
401: FLMIQVLRVY SVINERGRAH KLLLAAAVSV LTSCCVFGLP WFAPCRPCPA EPNATCGSLN KFRRFHCPPD HYNDLASLML NINDDAIRNL YATGTNDVYH
501: PGSMLAFFLA SYVLGVLSYG VVAPSGLFVP IILTGATYGR LVAMLLGRHS NLDHGLVAIL GSASFLGGTL RMTVSVCVII VELTNNLLLL PLVMLVLLIS
601: KTVADSFNAS IYDLIVRLKG LPYLDGHAEP YMRQLSVGDV VVGPLRSFNG VEKVGHIMHV LRTTGHHAFP VIDEPPFATA PVLYGLVLRA HLLVLLRKRE
701: FLPAQERYPK EYNIAARFEA QDFDKRGSGK QDTVDGVELS PEEMEMYIDL HPFTNASPYT VVETMSLAKA LVLFREVGLR HLLVVPKACD RSPVVGILTR
801: HDFMPEHILG LHPVLLGGRW KRLRWHKAAV GKYFRDLIVR LANCG
101: SRASTTRSSR TTCSTRTGGR GPRRTRCGTW CSNGPSASPS ASSPASSASS STSPSRTSPD SSTPPSPPSW SPAGINKCTF WVFAGANLAL LLLATAITAS
201: VSPAAGGSGI PEVKAYLNGV DAPNIFSLRT LAVKVIGNIA AVSSSLHVGK AGPMVHTGAC IAAIFGQGGS RRYGLTWRWL RYFKNDRDRR DLVTIGAGAG
301: VSAAFRAPVG GVLFALESLS SWWRSALIWR SFFTTAVVAV VLRLFVELCG TGRCGMFGKG GLIMYDVSTL FEDLMTYHLK DIPIVVLIGV IGAVLGAFYN
401: FLMIQVLRVY SVINERGRAH KLLLAAAVSV LTSCCVFGLP WFAPCRPCPA EPNATCGSLN KFRRFHCPPD HYNDLASLML NINDDAIRNL YATGTNDVYH
501: PGSMLAFFLA SYVLGVLSYG VVAPSGLFVP IILTGATYGR LVAMLLGRHS NLDHGLVAIL GSASFLGGTL RMTVSVCVII VELTNNLLLL PLVMLVLLIS
601: KTVADSFNAS IYDLIVRLKG LPYLDGHAEP YMRQLSVGDV VVGPLRSFNG VEKVGHIMHV LRTTGHHAFP VIDEPPFATA PVLYGLVLRA HLLVLLRKRE
701: FLPAQERYPK EYNIAARFEA QDFDKRGSGK QDTVDGVELS PEEMEMYIDL HPFTNASPYT VVETMSLAKA LVLFREVGLR HLLVVPKACD RSPVVGILTR
801: HDFMPEHILG LHPVLLGGRW KRLRWHKAAV GKYFRDLIVR LANCG
001: MVEEDLNQIG GNSNYNGEGG DPESNTLNQP LVKANRTLSS TPLALVGAKV SHIESLDYEI NENDLFKHDW RKRSKAQVLQ YVFLKWTLAC LVGLFTGLIA
101: TLINLAVENI AGYKLLAVGH FLTQERYVTG LMVLVGANLG LTLVASVLCV CFAPTAAGPG IPEIKAYLNG VDTPNMFGAT TMIVKIVGSI GAVAAGLDLG
201: KEGPLVHIGS CIASLLGQGG TDNHRIKWRW LRYFNNDRDR RDLITCGSAA GVCAAFRSPV GGVLFALEEV ATWWRSALLW RTFFSTAVVV VVLREFIEIC
301: NSGKCGLFGK GGLIMFDVSH VTYTYHVTDI IPVMLIGVIG GILGSLYNHL LHKVLRLYNL INEKGKIHKV LLSLTVSLFT SVCLYGLPFL AKCKPCDPSI
401: DEICPTNGRS GNFKQFHCPK GYYNDLATLL LTTNDDAVRN LFSSNTPNEF GMGSLWIFFV LYCILGLFTF GIATPSGLFL PIILMGAAYG RMLGAAMGSY
501: TSIDQGLYAV LGAAALMAGS MRMTVSLCVI FLELTNNLLL LPITMIVLLI AKTVGDSFNP SIYDIILHLK GLPFLEANPE PWMRNLTVGE LGDAKPPVVT
601: LQGVEKVSNI VDVLKNTTHN AFPVLDEAEV PQVGLATGAT ELHGLILRAH LVKVLKKRWF LTEKRRTEEW EVREKFPWDE LAEREDNFDD VAITSAEMEM
701: YVDLHPLTNT TPYTVMENMS VAKALVLFRQ VGLRHLLIVP KIQASGMCPV VGILTRQDLR AYNILQAFPL LEKSKGGKTH
101: TLINLAVENI AGYKLLAVGH FLTQERYVTG LMVLVGANLG LTLVASVLCV CFAPTAAGPG IPEIKAYLNG VDTPNMFGAT TMIVKIVGSI GAVAAGLDLG
201: KEGPLVHIGS CIASLLGQGG TDNHRIKWRW LRYFNNDRDR RDLITCGSAA GVCAAFRSPV GGVLFALEEV ATWWRSALLW RTFFSTAVVV VVLREFIEIC
301: NSGKCGLFGK GGLIMFDVSH VTYTYHVTDI IPVMLIGVIG GILGSLYNHL LHKVLRLYNL INEKGKIHKV LLSLTVSLFT SVCLYGLPFL AKCKPCDPSI
401: DEICPTNGRS GNFKQFHCPK GYYNDLATLL LTTNDDAVRN LFSSNTPNEF GMGSLWIFFV LYCILGLFTF GIATPSGLFL PIILMGAAYG RMLGAAMGSY
501: TSIDQGLYAV LGAAALMAGS MRMTVSLCVI FLELTNNLLL LPITMIVLLI AKTVGDSFNP SIYDIILHLK GLPFLEANPE PWMRNLTVGE LGDAKPPVVT
601: LQGVEKVSNI VDVLKNTTHN AFPVLDEAEV PQVGLATGAT ELHGLILRAH LVKVLKKRWF LTEKRRTEEW EVREKFPWDE LAEREDNFDD VAITSAEMEM
701: YVDLHPLTNT TPYTVMENMS VAKALVLFRQ VGLRHLLIVP KIQASGMCPV VGILTRQDLR AYNILQAFPL LEKSKGGKTH
Arabidopsis Description
CLC-BChloride channel protein [Source:UniProtKB/TrEMBL;Acc:A0A178VKG6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.