Factsheet for HORVU3Hr1G081920.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

plastid 2
mitochondrion 1
cytosol 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G418700.1	Wheat	mitochondrion	95.7	95.09
TraesCS3D01G379600.1	Wheat	plasma membrane, plastid	94.94	94.46
TraesCS3A01G390100.1	Wheat	plasma membrane, plastid	94.81	94.21
Zm00001d042651_P001	Maize	plasma membrane	79.49	79.09
EES01847	Sorghum	cytosol, peroxisome, plasma membrane	78.99	78.49
Os01t0876100-00	Rice	plasma membrane	78.73	71.33
Solyc10g044470.1.1	Tomato	plasma membrane	64.18	66.36
VIT_12s0035g01720.t01	Wine grape	plasma membrane	65.06	66.15
VIT_07s0130g00400.t01	Wine grape	cytosol	65.06	65.9
PGSC0003DMT400025239	Potato	plasma membrane	64.56	65.72
PGSC0003DMT400064087	Potato	plasma membrane	64.18	65.42
Solyc01g103140.2.1	Tomato	plasma membrane	64.05	65.29
Bra000596.1-P	Field mustard	plasma membrane	62.28	63.48
CDY21447	Canola	plasma membrane	62.15	63.35
CDX83179	Canola	plasma membrane	62.15	63.35
CDY16376	Canola	plasma membrane	61.9	63.1
CDX91539	Canola	plasma membrane	61.9	63.1
Bra022507.1-P	Field mustard	plasma membrane	61.9	63.1
AT5G49890.1	Thale cress	plasma membrane	62.03	62.9
KRH38787	Soybean	cytosol	61.27	61.34
KRH09287	Soybean	cytosol, nucleus, plasma membrane	61.27	60.8
HORVU2Hr1G077080.3	Barley	mitochondrion, peroxisome, plasma membrane, plastid	62.53	60.69
HORVU4Hr1G005590.4	Barley	plasma membrane	12.78	46.98
HORVU5Hr1G107380.2	Barley	plastid	47.09	44.02
HORVU0Hr1G040330.16	Barley	plasma membrane	30.76	41.33
HORVU0Hr1G015220.3	Barley	cytosol	21.14	40.63

Protein Annotations

Gene3D:1.10.3080.10	MapMan:24.2.16	Gene3D:3.10.580.10	UniProt:A0A287LXS0	InterPro:CBS_dom	InterPro:Cl-channel_core
InterPro:Cl-channel_volt-gated	InterPro:Cl_channel_pln	GO:GO:0003674	GO:GO:0005215	GO:GO:0005247	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0006810
GO:GO:0006811	GO:GO:0006821	GO:GO:0008150	GO:GO:0009705	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	GO:GO:1902476	EnsemblPlantsGene:HORVU3Hr1G081920	EnsemblPlants:HORVU3Hr1G081920.1	InterPro:IPR000644	InterPro:IPR014743
PFAM:PF00571	PFAM:PF00654	PRINTS:PR00762	PRINTS:PR01120	PFscan:PS51371	PANTHER:PTHR11689
PANTHER:PTHR11689:SF84	SMART:SM00116	SUPFAM:SSF54631	SUPFAM:SSF81340	TMHMM:TMhelix	UniParc:UPI000B47A7D3
SEG:seg	:	:	:	:	:

Description

Chloride channel protein [Source:UniProtKB/TrEMBL;Acc:A0A287LXS0]

Coordinates

chrchr3H:-:596598968..596602905

Molecular Weight (calculated)

85126.7 Da

IEP (calculated)

8.736

GRAVY (calculated)

0.383

Length

790 amino acids

Sequence
(BLAST)

001: MAMAKTEKAL AVPVPESPRT PTPTPMSATA PTSARSVKWG DLEDAAGGLE RPLLRQRGSN TTSQMAVVGA NVCPIESLDY EIVENDLYKQ DWRSRGRIQV
101: FQYQVLKWLM ALLVGSVVGL VGFFNNIAVE NIAGYKLLLT SNLMLQNRNL HAFLLYMACN AVLAGSAAAI CAYLAPAAAG SGIPEVKAYL NGVDAHSILA
201: PSTLLVKIIG SILGVSAGFV LGKEGPMVHT GACVAAMLGQ GGSRKYGLTW NWIRYFKNDL DRRDLITCGA AAGVTAAFRA PVGGVLFALE EATSWWRSAL
301: LWRTFSTTAM SAIVLRSLIE YCRSGNCGLF GEGGLIMFDV SSRVTSYTGT DIAAVILLGI LGGLLGALFN HFVDLILRRY GVINDKGAPY KILMTVFISL
401: VTSCCSFGLS SLSPCVPCPP ELAPGKCPTI GRSGNYKKFW CPAGHYNALA SLFFNTNDDA IRNLFSGGTD NEFGVSTLLT FFIGVYTLGL ITYGVAVPSG
501: LFIPVILSGA TFGRLVGKLF GSGLDTGLFA IVGAASFLGG TMRMTVSVCV ILLELTNDLL LLPLIMLVLL VSKTVADCFN KGVYEQIVRM KGLPFLEVHA
601: DACMRSLVAS DVLSGPVITF SSVERVGTVV NTLRRTGHNG FPVIEDEPFA PAPELCGLVL RSHLIVLLKG RTFTRARVKT GAAEVFRKLK PFDFAKVGSS
701: GRAMEVSELR LTEEEMDMYV DLHPITNRSP YTVVENMSLA KAAVLFRDLG LRHMCVVPRT PGRPPVLGIL TRHDFMPQYI RGLFQNVLRE

Best Arabidopsis Sequence Match ( AT3G27170.1 )
(BLAST)

001: MVEEDLNQIG GNSNYNGEGG DPESNTLNQP LVKANRTLSS TPLALVGAKV SHIESLDYEI NENDLFKHDW RKRSKAQVLQ YVFLKWTLAC LVGLFTGLIA
101: TLINLAVENI AGYKLLAVGH FLTQERYVTG LMVLVGANLG LTLVASVLCV CFAPTAAGPG IPEIKAYLNG VDTPNMFGAT TMIVKIVGSI GAVAAGLDLG
201: KEGPLVHIGS CIASLLGQGG TDNHRIKWRW LRYFNNDRDR RDLITCGSAA GVCAAFRSPV GGVLFALEEV ATWWRSALLW RTFFSTAVVV VVLREFIEIC
301: NSGKCGLFGK GGLIMFDVSH VTYTYHVTDI IPVMLIGVIG GILGSLYNHL LHKVLRLYNL INEKGKIHKV LLSLTVSLFT SVCLYGLPFL AKCKPCDPSI
401: DEICPTNGRS GNFKQFHCPK GYYNDLATLL LTTNDDAVRN LFSSNTPNEF GMGSLWIFFV LYCILGLFTF GIATPSGLFL PIILMGAAYG RMLGAAMGSY
501: TSIDQGLYAV LGAAALMAGS MRMTVSLCVI FLELTNNLLL LPITMIVLLI AKTVGDSFNP SIYDIILHLK GLPFLEANPE PWMRNLTVGE LGDAKPPVVT
601: LQGVEKVSNI VDVLKNTTHN AFPVLDEAEV PQVGLATGAT ELHGLILRAH LVKVLKKRWF LTEKRRTEEW EVREKFPWDE LAEREDNFDD VAITSAEMEM
701: YVDLHPLTNT TPYTVMENMS VAKALVLFRQ VGLRHLLIVP KIQASGMCPV VGILTRQDLR AYNILQAFPL LEKSKGGKTH

Arabidopsis Description

CLC-BChloride channel protein [Source:UniProtKB/TrEMBL;Acc:A0A178VKG6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.