Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 5
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400025239 | Potato | plasma membrane | 99.08 | 97.55 |
| Solyc01g103140.2.1 | Tomato | plasma membrane | 86.13 | 84.9 |
| Bra000596.1-P | Field mustard | plasma membrane | 78.01 | 76.9 |
| CDY21447 | Canola | plasma membrane | 77.88 | 76.77 |
| CDX83179 | Canola | plasma membrane | 77.88 | 76.77 |
| AT5G49890.1 | Thale cress | plasma membrane | 77.88 | 76.38 |
| CDY16376 | Canola | plasma membrane | 77.36 | 76.26 |
| Bra022507.1-P | Field mustard | plasma membrane | 77.36 | 76.26 |
| CDX91539 | Canola | plasma membrane | 77.23 | 76.13 |
| VIT_12s0035g01720.t01 | Wine grape | plasma membrane | 77.36 | 76.06 |
| EES01847 | Sorghum | cytosol, peroxisome, plasma membrane | 68.59 | 65.91 |
| Zm00001d042651_P001 | Maize | plasma membrane | 68.19 | 65.62 |
| HORVU3Hr1G081920.1 | Barley | plasma membrane, plastid | 66.36 | 64.18 |
| TraesCS3B01G418700.1 | Wheat | mitochondrion | 66.23 | 63.65 |
| TraesCS3D01G379600.1 | Wheat | plasma membrane, plastid | 66.1 | 63.6 |
| TraesCS3A01G390100.1 | Wheat | plasma membrane, plastid | 65.58 | 63.02 |
| Solyc07g007690.2.1 | Tomato | plasma membrane | 61.65 | 59.77 |
| Os01t0876100-00 | Rice | plasma membrane | 67.54 | 59.17 |
| Solyc02g068080.2.1 | Tomato | peroxisome, plasma membrane, vacuole | 53.8 | 52.42 |
| Solyc02g094060.2.1 | Tomato | plasma membrane | 51.7 | 51.77 |
| Solyc09g075800.2.1 | Tomato | plasma membrane | 46.2 | 44.51 |
Protein Annotations
| MapMan:24.2.16 | Gene3D:3.10.580.10 | InterPro:CBS_dom | InterPro:Cl-channel_core | InterPro:Cl-channel_volt-gated | InterPro:Cl_channel_pln |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005216 | GO:GO:0005247 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0006821 |
| GO:GO:0008150 | GO:GO:0009705 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | GO:GO:1902476 |
| InterPro:IPR000644 | InterPro:IPR014743 | UniProt:K4CZH2 | PFAM:PF00571 | PFAM:PF00654 | PRINTS:PR00762 |
| PRINTS:PR01120 | PFscan:PS51371 | PANTHER:PTHR11689 | PANTHER:PTHR11689:SF105 | SUPFAM:SSF54631 | SUPFAM:SSF81340 |
| EnsemblPlantsGene:Solyc10g044470.1 | EnsemblPlants:Solyc10g044470.1.1 | TMHMM:TMhelix | UniParc:UPI000276AFF6 | SEG:seg | : |
Description
Chloride channel protein [Source:UniProtKB/TrEMBL;Acc:K4CZH2]
Coordinates
chr10:+:26484868..26491619
Molecular Weight (calculated)
83409.6 Da
IEP (calculated)
8.500
GRAVY (calculated)
0.410
Length
764 amino acids
Sequence
(BLAST)
(BLAST)
001: MIEEEKFDLE RNFSTISETG SIREPLLKSK SRVNNTSQIA IVGANVYPIE SLDYDIVEND LFKQDWRSRK KVEIFQYIFL KWTLVLLIGL STGLVGFFNN
101: IGVENIAGFK LLLTSNLMLE GKYFQAFAAF AGCNVFFATC AAALCAFIAP AAAGSGIPEV KAYLNGIDAH SILAPSTLLV KIFGSILGVS AGFVVGKEGP
201: MVHTGACIAN LLGQGGSRKY HLTWKWLKYF KNDRDRRDLI TCGAAAGVAA AFRAPVGGVL FALEEIASWW RSALLWRTFF TTAVVAMVLR SLIQFCRGGN
301: CGLFGQGGLI MFDVNSGVSN YNTVDVLALI LIGVLGGLLG SLYNYLVDKV LRTYAVINER GPAFKILLVM SVSILTSCCS YGLPWFAGCI PCPVGLEEKC
401: PTIGRSGNYK NFQCPAGHYN DLASLFLNTN DDAIRNLFSS NNSNEFHIST LLIFFAGVYC LGIITYGIAI PSGLFIPVIL AGASYGRIFG RALGSLSNLN
501: VGLFSLLGAA SFLGGTMRMT VSICVILLEL TNNLLMLPLV MLVLLISKTV ADIFNKGVYD QIVKMKGLPF LEAHAEPFMR NLVAGDVCSG PLLSFSGVEK
601: VGNIVHALKY SRHNGFPVID EPPFSETPEL CGLVLRSHLL VLLNGKKFTK QRVLSASNIL SRFHAFDFAK PGSGKGLKFE DLVITEEEME MYIDLHPITN
701: TSPYTVVETM SLAKAAILFR QLGLRHLCVV PKKTGRAPIV GILTRHDFMH EHISNLYPHL VPHK
101: IGVENIAGFK LLLTSNLMLE GKYFQAFAAF AGCNVFFATC AAALCAFIAP AAAGSGIPEV KAYLNGIDAH SILAPSTLLV KIFGSILGVS AGFVVGKEGP
201: MVHTGACIAN LLGQGGSRKY HLTWKWLKYF KNDRDRRDLI TCGAAAGVAA AFRAPVGGVL FALEEIASWW RSALLWRTFF TTAVVAMVLR SLIQFCRGGN
301: CGLFGQGGLI MFDVNSGVSN YNTVDVLALI LIGVLGGLLG SLYNYLVDKV LRTYAVINER GPAFKILLVM SVSILTSCCS YGLPWFAGCI PCPVGLEEKC
401: PTIGRSGNYK NFQCPAGHYN DLASLFLNTN DDAIRNLFSS NNSNEFHIST LLIFFAGVYC LGIITYGIAI PSGLFIPVIL AGASYGRIFG RALGSLSNLN
501: VGLFSLLGAA SFLGGTMRMT VSICVILLEL TNNLLMLPLV MLVLLISKTV ADIFNKGVYD QIVKMKGLPF LEAHAEPFMR NLVAGDVCSG PLLSFSGVEK
601: VGNIVHALKY SRHNGFPVID EPPFSETPEL CGLVLRSHLL VLLNGKKFTK QRVLSASNIL SRFHAFDFAK PGSGKGLKFE DLVITEEEME MYIDLHPITN
701: TSPYTVVETM SLAKAAILFR QLGLRHLCVV PKKTGRAPIV GILTRHDFMH EHISNLYPHL VPHK
001: MDDRHEGDHH DIEVEGGALH GFERKISGIL DDGSVGFRQP LLARNRKNTT SQIAIVGANT CPIESLDYEI FENDFFKQDW RSRKKIEILQ YTFLKWALAF
101: LIGLATGLVG FLNNLGVENI AGFKLLLIGN LMLKEKYFQA FFAFAGCNLI LATAAASLCA FIAPAAAGSG IPEVKAYLNG IDAYSILAPS TLFVKIFGSI
201: FGVAAGFVVG KEGPMVHTGA CIANLLGQGG SKKYRLTWKW LRFFKNDRDR RDLITCGAAA GVAAAFRAPV GGVLFALEEA ASWWRNALLW RTFFTTAVVA
301: VVLRSLIEFC RSGRCGLFGK GGLIMFDVNS GPVLYSTPDL LAIVFLGVIG GVLGSLYNYL VDKVLRTYSI INEKGPRFKI MLVMAVSILS SCCAFGLPWL
401: SQCTPCPIGI EEGKCPSVGR SSIYKSFQCP PNHYNDLSSL LLNTNDDAIR NLFTSRSENE FHISTLAIFF VAVYCLGIIT YGIAIPSGLF IPVILAGASY
501: GRLVGRLLGP VSQLDVGLFS LLGAASFLGG TMRMTVSLCV ILLELTNNLL MLPLVMLVLL ISKTVADCFN RGVYDQIVTM KGLPYMEDHA EPYMRNLVAK
601: DVVSGALISF SRVEKVGVIW QALKMTRHNG FPVIDEPPFT EASELCGIAL RSHLLVLLQG KKFSKQRTTF GSQILRSCKA RDFGKAGLGK GLKIEDLDLS
701: EEEMEMYVDL HPITNTSPYT VLETLSLAKA AILFRQLGLR HLCVVPKTPG RPPIVGILTR HDFMPEHVLG LYPHIDPLK
101: LIGLATGLVG FLNNLGVENI AGFKLLLIGN LMLKEKYFQA FFAFAGCNLI LATAAASLCA FIAPAAAGSG IPEVKAYLNG IDAYSILAPS TLFVKIFGSI
201: FGVAAGFVVG KEGPMVHTGA CIANLLGQGG SKKYRLTWKW LRFFKNDRDR RDLITCGAAA GVAAAFRAPV GGVLFALEEA ASWWRNALLW RTFFTTAVVA
301: VVLRSLIEFC RSGRCGLFGK GGLIMFDVNS GPVLYSTPDL LAIVFLGVIG GVLGSLYNYL VDKVLRTYSI INEKGPRFKI MLVMAVSILS SCCAFGLPWL
401: SQCTPCPIGI EEGKCPSVGR SSIYKSFQCP PNHYNDLSSL LLNTNDDAIR NLFTSRSENE FHISTLAIFF VAVYCLGIIT YGIAIPSGLF IPVILAGASY
501: GRLVGRLLGP VSQLDVGLFS LLGAASFLGG TMRMTVSLCV ILLELTNNLL MLPLVMLVLL ISKTVADCFN RGVYDQIVTM KGLPYMEDHA EPYMRNLVAK
601: DVVSGALISF SRVEKVGVIW QALKMTRHNG FPVIDEPPFT EASELCGIAL RSHLLVLLQG KKFSKQRTTF GSQILRSCKA RDFGKAGLGK GLKIEDLDLS
701: EEEMEMYVDL HPITNTSPYT VLETLSLAKA AILFRQLGLR HLCVVPKTPG RPPIVGILTR HDFMPEHVLG LYPHIDPLK
Arabidopsis Description
CLC-CChloride channel protein CLC-c [Source:UniProtKB/Swiss-Prot;Acc:Q96282]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.