Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 5
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_05s0020g03090.t01 | Wine grape | plasma membrane | 83.23 | 82.5 |
| Bra009891.1-P | Field mustard | plasma membrane | 80.83 | 80.93 |
| CDX88226 | Canola | plasma membrane | 80.83 | 80.93 |
| AT5G26240.1 | Thale cress | plasma membrane | 80.83 | 80.93 |
| KRH77868 | Soybean | plasma membrane | 81.34 | 80.52 |
| CDY52633 | Canola | plasma membrane | 81.08 | 80.17 |
| KRH27622 | Soybean | plasma membrane | 80.83 | 80.03 |
| GSMUA_Achr4P06890_001 | Banana | plasma membrane | 66.83 | 77.94 |
| Zm00001d033597_P004 | Maize | plasma membrane | 73.27 | 74.39 |
| HORVU4Hr1G005590.4 | Barley | plasma membrane | 20.05 | 73.95 |
| TraesCS4D01G033500.1 | Wheat | plasma membrane | 74.27 | 73.35 |
| KXG37802 | Sorghum | plasma membrane | 73.77 | 73.31 |
| TraesCS4A01G277600.2 | Wheat | plasma membrane | 74.15 | 72.95 |
| TraesCS4B01G035500.1 | Wheat | plasma membrane | 74.02 | 72.83 |
| HORVU0Hr1G040330.16 | Barley | plasma membrane | 53.22 | 71.77 |
| GSMUA_Achr4P06880_001 | Banana | cytosol | 8.07 | 69.57 |
| Os03t0695700-01 | Rice | extracellular, plasma membrane | 23.08 | 68.03 |
| GSMUA_Achr7P27080_001 | Banana | mitochondrion, plasma membrane | 20.68 | 58.16 |
| Solyc10g044470.1.1 | Tomato | plasma membrane | 44.51 | 46.2 |
| Solyc01g103140.2.1 | Tomato | plasma membrane | 45.02 | 46.06 |
| Solyc07g007690.2.1 | Tomato | plasma membrane | 42.24 | 42.51 |
| Solyc02g068080.2.1 | Tomato | peroxisome, plasma membrane, vacuole | 41.49 | 41.96 |
| Solyc02g094060.2.1 | Tomato | plasma membrane | 39.97 | 41.55 |
Protein Annotations
| MapMan:24.2.16 | Gene3D:3.10.580.10 | InterPro:CBS_dom | InterPro:Cl-channel_core | InterPro:Cl-channel_volt-gated | InterPro:Cl_channel_pln |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005216 | GO:GO:0005247 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005802 | GO:GO:0006810 | GO:GO:0006811 |
| GO:GO:0006821 | GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009826 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0040007 | GO:GO:0055085 | GO:GO:1902476 |
| InterPro:IPR000644 | InterPro:IPR014743 | UniProt:K4CVF7 | PFAM:PF00571 | PFAM:PF00654 | PRINTS:PR00762 |
| PRINTS:PR01120 | PFscan:PS51371 | PANTHER:PTHR11689 | PANTHER:PTHR11689:SF92 | SMART:SM00116 | SUPFAM:SSF54631 |
| SUPFAM:SSF81340 | EnsemblPlantsGene:Solyc09g075800.2 | EnsemblPlants:Solyc09g075800.2.1 | TMHMM:TMhelix | UniParc:UPI000276BD5F | SEG:seg |
Description
Chloride channel protein CLC-d [Source:Projected from Arabidopsis thaliana (AT5G26240) UniProtKB/Swiss-Prot;Acc:P92943]
Coordinates
chr9:+:67416361..67429405
Molecular Weight (calculated)
87410.8 Da
IEP (calculated)
7.798
GRAVY (calculated)
0.256
Length
793 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSDHFQNGV ETAKLMWSRI PATEEEEVGE VGPSRKGNGS TVESLDYEVV ENFAYREEQA KRGKLYMGYV VLVKWFLALL IGIGTGLAAV FINLSVENFA
101: GWKFSLTFQI IQKSYFAGFL VYILINLVLV LSSVYIITCF APAASGSGIP EIKGYLNGID THGILLFRTL IGKIFGSIGS VGGGLALGKE GPLVHIGACI
201: ASLLGQGGST KYHLRSRWLQ VFSSERDRRD LVTCGCAAGV AAAFRAPVGG VLFALEEVTS WWRSQLMWRV FFTSAIVAVV VRTAMGWCKD GNCGHFGAGG
301: FIIWDISGGQ EDYSFEELLP MAFIGVIGGL LGALFNQLTL YMAHWRRNYL HKNGIRVKII EACLISVITS AISFGLPLFR RCTPCPEADA NSGIECPQAP
401: GMFGNYVNFY CQNSKEYNDL ATIFFNTQDD AIRNLFSAKT AHEFSAQGLL TFLVMFYTLA VVTFGTAVPA GQFVPGIMIG STYGRLVGMF VVSFYKKLNI
501: EEGTYALLGA ASFLGGSMRM TVSLCVIMVE ITNNLKLLPL IMLVLLISKA VGDAFNEGLY EEQARLRSIP LLESRPKYQM RYMTAKEACG SQNVVYFPRV
601: VKVSDIVSIL RSNDHNGFPV VDHSRSGETL VIGLILRSHL LVLLQSKVDF QHSPLPCDSR GDLLPIRHNL CEFVKPVSSK GISLRDIHFT PDDLEMYIDL
701: APFLNPSPYV VPEDMSLTKV YNLFRQLGLR HLLVVPRPAR VIGMITRKDL ILEDNDDPTA VELQSTSVRG TQSNHRVIKR KGDAQQPLLD GLL
101: GWKFSLTFQI IQKSYFAGFL VYILINLVLV LSSVYIITCF APAASGSGIP EIKGYLNGID THGILLFRTL IGKIFGSIGS VGGGLALGKE GPLVHIGACI
201: ASLLGQGGST KYHLRSRWLQ VFSSERDRRD LVTCGCAAGV AAAFRAPVGG VLFALEEVTS WWRSQLMWRV FFTSAIVAVV VRTAMGWCKD GNCGHFGAGG
301: FIIWDISGGQ EDYSFEELLP MAFIGVIGGL LGALFNQLTL YMAHWRRNYL HKNGIRVKII EACLISVITS AISFGLPLFR RCTPCPEADA NSGIECPQAP
401: GMFGNYVNFY CQNSKEYNDL ATIFFNTQDD AIRNLFSAKT AHEFSAQGLL TFLVMFYTLA VVTFGTAVPA GQFVPGIMIG STYGRLVGMF VVSFYKKLNI
501: EEGTYALLGA ASFLGGSMRM TVSLCVIMVE ITNNLKLLPL IMLVLLISKA VGDAFNEGLY EEQARLRSIP LLESRPKYQM RYMTAKEACG SQNVVYFPRV
601: VKVSDIVSIL RSNDHNGFPV VDHSRSGETL VIGLILRSHL LVLLQSKVDF QHSPLPCDSR GDLLPIRHNL CEFVKPVSSK GISLRDIHFT PDDLEMYIDL
701: APFLNPSPYV VPEDMSLTKV YNLFRQLGLR HLLVVPRPAR VIGMITRKDL ILEDNDDPTA VELQSTSVRG TQSNHRVIKR KGDAQQPLLD GLL
001: MLSNHLQNGI ESDNLLWSRV PESDDTSTDD ITLLNSHRDG DGGVNSLDYE VIENYAYREE QAHRGKLYVG YYVAVKWFFS LLIGIGTGLA AVFINLSVEN
101: FAGWKFALTF AIIQKSYFAG FIVYLLINLV LVFSSAYIIT QFAPAAAGSG IPEIKGYLNG IDIPGTLLFR TLIGKIFGSI GSVGGGLALG KEGPLVHTGA
201: CIASLLGQGG STKYHLNSRW PQLFKSDRDR RDLVTCGCAA GVAAAFRAPV GGVLFALEEV TSWWRSQLMW RVFFTSAIVA VVVRTAMGWC KSGICGHFGG
301: GGFIIWDVSD GQDDYYFKEL LPMAVIGVIG GLLGALFNQL TLYMTSWRRN SLHKKGNRVK IIEACIISCI TSAISFGLPL LRKCSPCPES VPDSGIECPR
401: PPGMYGNYVN FFCKTDNEYN DLATIFFNTQ DDAIRNLFSA KTMREFSAQS LLTFLAMFYT LAVVTFGTAV PAGQFVPGIM IGSTYGRLVG MFVVRFYKKL
501: NIEEGTYALL GAASFLGGSM RMTVSLCVIM VEITNNLKLL PLIMLVLLIS KAVGDAFNEG LYEVQARLKG IPLLESRPKY HMRQMIAKEA CQSQKVISLP
601: RVIRVADVAS ILGSNKHNGF PVIDHTRSGE TLVIGLVLRS HLLVLLQSKV DFQHSPLPCD PSARNIRHSF SEFAKPVSSK GLCIEDIHLT SDDLEMYIDL
701: APFLNPSPYV VPEDMSLTKV YNLFRQLGLR HLFVVPRPSR VIGLITRKDL LIEENGESSA VELQQSTSVR GRYSETATRM DAARPLLDDL LG
101: FAGWKFALTF AIIQKSYFAG FIVYLLINLV LVFSSAYIIT QFAPAAAGSG IPEIKGYLNG IDIPGTLLFR TLIGKIFGSI GSVGGGLALG KEGPLVHTGA
201: CIASLLGQGG STKYHLNSRW PQLFKSDRDR RDLVTCGCAA GVAAAFRAPV GGVLFALEEV TSWWRSQLMW RVFFTSAIVA VVVRTAMGWC KSGICGHFGG
301: GGFIIWDVSD GQDDYYFKEL LPMAVIGVIG GLLGALFNQL TLYMTSWRRN SLHKKGNRVK IIEACIISCI TSAISFGLPL LRKCSPCPES VPDSGIECPR
401: PPGMYGNYVN FFCKTDNEYN DLATIFFNTQ DDAIRNLFSA KTMREFSAQS LLTFLAMFYT LAVVTFGTAV PAGQFVPGIM IGSTYGRLVG MFVVRFYKKL
501: NIEEGTYALL GAASFLGGSM RMTVSLCVIM VEITNNLKLL PLIMLVLLIS KAVGDAFNEG LYEVQARLKG IPLLESRPKY HMRQMIAKEA CQSQKVISLP
601: RVIRVADVAS ILGSNKHNGF PVIDHTRSGE TLVIGLVLRS HLLVLLQSKV DFQHSPLPCD PSARNIRHSF SEFAKPVSSK GLCIEDIHLT SDDLEMYIDL
701: APFLNPSPYV VPEDMSLTKV YNLFRQLGLR HLFVVPRPSR VIGLITRKDL LIEENGESSA VELQQSTSVR GRYSETATRM DAARPLLDDL LG
Arabidopsis Description
CLC-DChloride channel protein CLC-d [Source:UniProtKB/Swiss-Prot;Acc:P92943]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.