Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, plastid, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- peroxisome 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G308100.1 | Wheat | plasma membrane | 90.29 | 91.3 |
| TraesCS2A01G309900.1 | Wheat | plasma membrane | 89.93 | 91.27 |
| TraesCS2B01G326900.1 | Wheat | plasma membrane | 90.17 | 91.18 |
| EES12223 | Sorghum | plasma membrane | 81.08 | 82.71 |
| Zm00001d025474_P003 | Maize | plasma membrane | 80.22 | 82.14 |
| GSMUA_Achr6P07410_001 | Banana | plasma membrane | 71.13 | 75.59 |
| GSMUA_Achr6P24170_001 | Banana | plasma membrane | 67.2 | 75.24 |
| HORVU3Hr1G081920.1 | Barley | plasma membrane, plastid | 60.69 | 62.53 |
| HORVU5Hr1G107380.2 | Barley | plastid | 49.02 | 47.22 |
| HORVU0Hr1G040330.16 | Barley | plasma membrane | 31.2 | 43.2 |
| HORVU4Hr1G005590.4 | Barley | plasma membrane | 9.95 | 37.67 |
| HORVU0Hr1G015220.3 | Barley | cytosol | 17.94 | 35.52 |
Protein Annotations
| MapMan:24.2.16 | Gene3D:3.10.580.10 | UniProt:A0A287IIQ4 | InterPro:CBS_dom | InterPro:Cl-channel_core | InterPro:Cl-channel_volt-gated |
| InterPro:Cl_channel_pln | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005247 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0006811 | GO:GO:0006821 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 |
| GO:GO:1902476 | EnsemblPlantsGene:HORVU2Hr1G077080 | EnsemblPlants:HORVU2Hr1G077080.3 | InterPro:IPR000644 | InterPro:IPR014743 | PFAM:PF00571 |
| PFAM:PF00654 | PRINTS:PR00762 | PRINTS:PR01120 | PFscan:PS51371 | PANTHER:PTHR11689 | PANTHER:PTHR11689:SF109 |
| SMART:SM00116 | SUPFAM:SSF54631 | SUPFAM:SSF81340 | TMHMM:TMhelix | UniParc:UPI000B478341 | SEG:seg |
Description
No Description!
Coordinates
chrchr2H:-:557575542..557583749
Molecular Weight (calculated)
88098.6 Da
IEP (calculated)
8.461
GRAVY (calculated)
0.217
Length
814 amino acids
Sequence
(BLAST)
(BLAST)
001: RPSVFRTPCA LRDSYSSISV SVGVSQGRRP LLITRGAQQA QGDSGPSGTR GEERRGEEAG VSKQQRERRM DGDHAPHSNQ HPPPPPMPER ESSFNYDIES
101: MDGGGWRGAG RYASSDALLR YDDDGPREPL MRKRTMNTTS QIAIVGANVF AIENIAGFKL VLTGDLMLQK RYFTAFLAYG GCNLFLGATA AALCAYIAPA
201: AAGSGIPEVK AYLNGVDAYS ILAPSTLFVK IFGSILGVSG GFVLGKEGPM VHTGACIANL LGQGGSRKYH LTWNWLKYFK NDRDRRDLIT CGAAAGVAAA
301: FRAPVGGVLF ALEEAASWWR SALLWRTFFT TAVVAVVLRA LIEFCRKGKC GLFGQGGLIM FDLSSNIPSY GTQDLIAIII LGVIGGVFGG LFNFLLDRIL
401: RVYSIINERG APSKILLTIT ISIITSACSY GLPWLAACSP CPVGSMEECP TIGRSGNFKS FQCPPGHYNG LASLFFNTND DAIRNLFSRG TENEFHMSSL
501: FVFFIAIYCL GLVTYGIAVP SGLFIPVILA GATYGRIVGT LLGPMSDIDP GLFALLGAAS FLGGTMRMTV SVCVILLELT NELHMLPLVM LVLLISKTIA
601: DCFNKGVYDQ IVVMKGLPFM EAHAEPYMRH LVASDVVSGP LISFSGVEKV GNIVHALRIT GHNGFPVVDE PPVSEAPELV GLVLRSHLLV LLNGRNFMKE
701: KVKTSGSFVL RRFGAFDFAK PGSGKGMKIE DLDFTEEEME MYVDLHPITN TSPYTVVETM SLAKAAVLFR ALGLRHLLVV PKTPGRFPIV GILTRHDLMP
801: EHIHGLFPNL RKSH
101: MDGGGWRGAG RYASSDALLR YDDDGPREPL MRKRTMNTTS QIAIVGANVF AIENIAGFKL VLTGDLMLQK RYFTAFLAYG GCNLFLGATA AALCAYIAPA
201: AAGSGIPEVK AYLNGVDAYS ILAPSTLFVK IFGSILGVSG GFVLGKEGPM VHTGACIANL LGQGGSRKYH LTWNWLKYFK NDRDRRDLIT CGAAAGVAAA
301: FRAPVGGVLF ALEEAASWWR SALLWRTFFT TAVVAVVLRA LIEFCRKGKC GLFGQGGLIM FDLSSNIPSY GTQDLIAIII LGVIGGVFGG LFNFLLDRIL
401: RVYSIINERG APSKILLTIT ISIITSACSY GLPWLAACSP CPVGSMEECP TIGRSGNFKS FQCPPGHYNG LASLFFNTND DAIRNLFSRG TENEFHMSSL
501: FVFFIAIYCL GLVTYGIAVP SGLFIPVILA GATYGRIVGT LLGPMSDIDP GLFALLGAAS FLGGTMRMTV SVCVILLELT NELHMLPLVM LVLLISKTIA
601: DCFNKGVYDQ IVVMKGLPFM EAHAEPYMRH LVASDVVSGP LISFSGVEKV GNIVHALRIT GHNGFPVVDE PPVSEAPELV GLVLRSHLLV LLNGRNFMKE
701: KVKTSGSFVL RRFGAFDFAK PGSGKGMKIE DLDFTEEEME MYVDLHPITN TSPYTVVETM SLAKAAVLFR ALGLRHLLVV PKTPGRFPIV GILTRHDLMP
801: EHIHGLFPNL RKSH
001: MVFTGANLGL TLVATVLVVY FAPTAAGPGI PEIKAYLNGI DTPNMFGFTT MMVKIVGSIG AVAAGLDLGK EGPLVHIGSC IASLLGQGGP DNHRIKWRWL
101: RYFNNDRDRR DLITCGSASG VCAAFRSPVG GVLFALEEVA TWWRSALLWR TFFSTAVVVV VLRAFIEICN SGKCGLFGSG GLIMFDVSHV EVRYHAADII
201: PVTLIGVFGG ILGSLYNHLL HKVLRLYNLI NQKGKIHKVL LSLGVSLFTS VCLFGLPFLA ECKPCDPSID EICPTNGRSG NFKQFNCPNG YYNDLSTLLL
301: TTNDDAVRNI FSSNTPNEFG MVSLWIFFGL YCILGLITFG IATPSGLFLP IILMGSAYGR MLGTAMGSYT NIDQGLYAVL GAASLMAGSM RMTVSLCVIF
401: LELTNNLLLL PITMFVLLIA KTVGDSFNLS IYEIILHLKG LPFLEANPEP WMRNLTVGEL NDAKPPVVTL NGVEKVANIV DVLRNTTHNA FPVLDGADQN
501: TGTELHGLIL RAHLVKVLKK RWFLNEKRRT EEWEVREKFT PVELAEREDN FDDVAITSSE MQLYVDLHPL TNTTPYTVVQ SMSVAKALVL FRSVGLRHLL
601: VVPKIQASGM SPVIGILTRQ DLRAYNILQA FPHLDKHKSG KAR
101: RYFNNDRDRR DLITCGSASG VCAAFRSPVG GVLFALEEVA TWWRSALLWR TFFSTAVVVV VLRAFIEICN SGKCGLFGSG GLIMFDVSHV EVRYHAADII
201: PVTLIGVFGG ILGSLYNHLL HKVLRLYNLI NQKGKIHKVL LSLGVSLFTS VCLFGLPFLA ECKPCDPSID EICPTNGRSG NFKQFNCPNG YYNDLSTLLL
301: TTNDDAVRNI FSSNTPNEFG MVSLWIFFGL YCILGLITFG IATPSGLFLP IILMGSAYGR MLGTAMGSYT NIDQGLYAVL GAASLMAGSM RMTVSLCVIF
401: LELTNNLLLL PITMFVLLIA KTVGDSFNLS IYEIILHLKG LPFLEANPEP WMRNLTVGEL NDAKPPVVTL NGVEKVANIV DVLRNTTHNA FPVLDGADQN
501: TGTELHGLIL RAHLVKVLKK RWFLNEKRRT EEWEVREKFT PVELAEREDN FDDVAITSSE MQLYVDLHPL TNTTPYTVVQ SMSVAKALVL FRSVGLRHLL
601: VVPKIQASGM SPVIGILTRQ DLRAYNILQA FPHLDKHKSG KAR
Arabidopsis Description
CLC-AChloride channel protein CLC-a [Source:UniProtKB/Swiss-Prot;Acc:P92941]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.