Factsheet for Bra038948.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47559	Canola	plasma membrane	99.87	99.87
CDY12393	Canola	plasma membrane	98.95	98.95
AT5G33280.1	Thale cress	plasma membrane	91.23	91.11
VIT_11s0118g00220.t01	Wine grape	plasma membrane	76.57	75.78
PGSC0003DMT400078919	Potato	plasma membrane	73.3	73.01
KRH20183	Soybean	plasma membrane	72.77	72.68
Solyc07g007690.2.1	Tomato	plasma membrane	72.64	70.43
Zm00001d002091_P002	Maize	plasma membrane	64.53	65.04
GSMUA_Achr5P23490_001	Banana	plasma membrane	66.62	64.76
GSMUA_Achr6P02920_001	Banana	plasma membrane	63.22	63.89
Zm00001d039812_P001	Maize	plasma membrane	20.42	63.67
EES11540	Sorghum	plasma membrane	66.49	62.41
GSMUA_Achr3P13250_001	Banana	cytosol, peroxisome, plasma membrane	62.57	61.36
Os08t0300300-01	Rice	plasma membrane	63.87	61.31
TraesCS2D01G519000.2	Wheat	plasma membrane	64.4	60.15
TraesCS2B01G546000.1	Wheat	plasma membrane	64.27	60.1
TraesCS5A01G449500.2	Wheat	plasma membrane	59.16	60.03
TraesCS2A01G517500.3	Wheat	plasma membrane	64.27	59.73
Zm00001d015702_P001	Maize	plasma membrane	50.39	59.41
EES06435	Sorghum	plasma membrane	61.65	59.39
TraesCS5B01G457100.1	Wheat	plasma membrane	61.39	59.22
TraesCS5D01G456000.1	Wheat	plasma membrane	61.39	59.22
GSMUA_Achr1P26050_001	Banana	plasma membrane	59.42	58.81
Bra000596.1-P	Field mustard	plasma membrane	58.51	57.68
Bra022507.1-P	Field mustard	plasma membrane	58.25	57.42
Bra028478.1-P	Field mustard	plasma membrane	52.88	52.47
Bra030328.1-P	Field mustard	plasma membrane	53.27	52.45
Bra025253.1-P	Field mustard	plasma membrane	53.14	51.85
Zm00001d015700_P001	Maize	plasma membrane	14.79	51.36
Bra032985.1-P	Field mustard	plasma membrane	52.62	51.34
HORVU5Hr1G107380.2	Barley	plastid	56.54	51.12
Bra009891.1-P	Field mustard	plasma membrane	45.42	43.81

Protein Annotations

MapMan:24.2.16	Gene3D:3.10.580.10	EnsemblPlantsGene:Bra038948	EnsemblPlants:Bra038948.1	EnsemblPlants:Bra038948.1-P	InterPro:CBS_dom
InterPro:Cl-channel_core	InterPro:Cl-channel_volt-gated	InterPro:Cl_channel_pln	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216
GO:GO:0005247	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006821	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0055085	GO:GO:1902476	InterPro:IPR000644
InterPro:IPR014743	UniProt:M4FCX8	PFAM:PF00571	PFAM:PF00654	PRINTS:PR00762	PRINTS:PR01120
PFscan:PS51371	PANTHER:PTHR11689	PANTHER:PTHR11689:SF66	SMART:SM00116	SUPFAM:SSF54631	SUPFAM:SSF81340
TMHMM:TMhelix	UniParc:UPI0002546567	SEG:seg	:	:	:

Description

AT5G33280 (E=0.0) | chloride channel-like (CLC) protein, putative

Coordinates

chrA08:+:8465742..8468913

Molecular Weight (calculated)

83907.4 Da

IEP (calculated)

8.717

GRAVY (calculated)

0.465

Length

764 amino acids

Sequence
(BLAST)

001: MPDSTREDSV AVPLLPSLRH ATNSSSQVAI VGSNLCPVES LDYEIAENDF FKQDWRARSK TQIFQYVFMK WLLCFFIGII VSLIGFTNNL AVENLAGVKF
101: VVTSNMMLAG RYSMGFFVFT VTNLILTLFA SVITAFVAPA AAGSGIPEVK AYLNGVDAPE IFSLRTLLVK IIGNISAVSG SLLIGKAGPM VHTGACVASI
201: LGQGGSKRYG LTWRWLRYFN NDRDRRDLVT CGSAAGIAAS FRAPVGGVLF ALEEMSSWWR SALLWRIFFS TAVVAIVLRA LIDVCLSGKC GLFGKGGLIV
301: FDVYSENASY HLGDVLPVLL LGFVGGILGS IYNFLLEKVL RAYNYIYEKG VAWKIILACA ISIFTSCLLF GLPFLASCQP CPADALEECP TIGRSGNFKK
401: YQCPPGHYND LASLIFNTND DAIKNLFSKN TDFEFHYLSV LVFFITCFFL SILSYGIVAP AGLFVPVIVT GASYGRFVGM LLGSKNLNDG LYAVLGAASF
501: LGGSMRMTVS LCVILLELTN NLLLLPMMMV VLLISKTVAD AFNANIYNLI MKIKGFPYLH SHVEPYMRQL TVGDVVTGPL QVFKGIEKIE TIVHVLKTTN
601: HNGFPVVDGP PLAPASVLCG LILRDHILTL LKKRVFLSSP VAFDSNTLAQ FKADEFAKKG SGRGDRIEDV ELSEEELNMY LDLHPFSNAS PYTVLETMSL
701: AKALVLFREV GLRHILVIPK LSNRPPLVGI LTRHDFMPEH ILGLRPSLSR SRWKRLRIRL PFLS

Best Arabidopsis Sequence Match ( AT5G33280.1 )
(BLAST)

001: MPNSTTEDSV AVPLLPSLRR ATNSTSQVAI VGANVCPIES LDYEIAENDF FKQDWRGRSK VEIFQYVFMK WLLCFCIGII VSLIGFANNL AVENLAGVKF
101: VVTSNMMIAG RFAMGFVVFS VTNLILTLFA SVITAFVAPA AAGSGIPEVK AYLNGVDAPE IFSLRTLIIK IIGNISAVSA SLLIGKAGPM VHTGACVASI
201: LGQGGSKRYR LTWRWLRFFK NDRDRRDLVT CGAAAGIAAS FRAPVGGVLF ALEEMSSWWR SALLWRIFFS TAVVAIVLRA LIDVCLSGKC GLFGKGGLIM
301: FDVYSENASY HLGDVLPVLL LGVVGGILGS LYNFLLDKVL RAYNYIYEKG VTWKILLACA ISIFTSCLLF GLPFLASCQP CPVDALEECP TIGRSGNFKK
401: YQCPPGHYND LASLIFNTND DAIKNLFSKN TDFEFHYFSV LVFFVTCFFL SIFSYGIVAP AGLFVPVIVT GASYGRFVGM LLGSNSNLNH GLFAVLGAAS
501: FLGGTMRMTV STCVILLELT NNLLLLPMMM VVLLISKTVA DGFNANIYNL IMKLKGFPYL YSHAEPYMRQ LLVGDVVTGP LQVFNGIEKV ETIVHVLKTT
601: NHNGFPVVDG PPLAAAPVLH GLILRAHILT LLKKRVFMPS PVACDSNTLS QFKAEEFAKK GSGRSDKIED VELSEEELNM YLDLHPFSNA SPYTVVETMS
701: LAKALILFRE VGIRHLLVIP KTSNRPPVVG ILTRHDFMPE HILGLHPSVS RSKWKRLRIR LPFFS

Arabidopsis Description

CLC-GPutative chloride channel-like protein CLC-g [Source:UniProtKB/Swiss-Prot;Acc:P60300]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.