Factsheet for Bra032985.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34173	Canola	plasma membrane	99.36	99.74
Bra025253.1-P	Field mustard	plasma membrane	94.13	94.13
AT3G27170.1	Thale cress	plasma membrane	92.08	92.44
Bra028478.1-P	Field mustard	plasma membrane	85.44	86.88
Bra030328.1-P	Field mustard	plasma membrane	85.31	86.08
VIT_14s0068g02190.t01	Wine grape	plasma membrane	79.57	78.96
KRG94508	Soybean	plasma membrane	78.93	78.23
KRH06955	Soybean	plasma membrane	73.82	77.58
KRH57669	Soybean	plasma membrane	76.63	77.22
Solyc02g068080.2.1	Tomato	peroxisome, plasma membrane, vacuole	76.88	76.79
PGSC0003DMT400017962	Potato	peroxisome, plasma membrane, vacuole	76.76	76.66
Solyc02g094060.2.1	Tomato	plasma membrane	68.84	70.64
GSMUA_Achr3P16100_001	Banana	plasma membrane	65.26	70.48
PGSC0003DMT400052072	Potato	plasma membrane	69.35	70.16
TraesCS6A01G098600.1	Wheat	plasma membrane	66.92	67.35
TraesCS6B01G126400.1	Wheat	plasma membrane	67.43	67.09
TraesCS6D01G084300.1	Wheat	cytosol, nucleus, plasma membrane	67.43	67.09
TraesCS6B01G126800.1	Wheat	plasma membrane	66.79	66.71
TraesCS6D01G084000.2	Wheat	plasma membrane	66.54	66.45
Zm00001d046919_P001	Maize	plasma membrane	67.56	66.04
EER90148	Sorghum	plasma membrane	67.56	66.04
TraesCS6A01G098500.2	Wheat	cytosol, peroxisome, plasma membrane	65.26	64.2
HORVU0Hr1G015220.3	Barley	cytosol	28.1	53.53
Bra038948.1-P	Field mustard	plasma membrane	51.34	52.62
Bra022507.1-P	Field mustard	plasma membrane	51.72	52.26
Bra000596.1-P	Field mustard	plasma membrane	51.6	52.13
Os12t0438600-01	Rice	plasma membrane	9.32	48.03
Bra009891.1-P	Field mustard	plasma membrane	41.25	40.78

Protein Annotations

MapMan:24.2.16	Gene3D:3.10.580.10	EnsemblPlantsGene:Bra032985	EnsemblPlants:Bra032985.1	EnsemblPlants:Bra032985.1-P	InterPro:CBS_dom
InterPro:Cl-channel_core	InterPro:Cl-channel_volt-gated	InterPro:Cl_channel_pln	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216
GO:GO:0005247	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006821	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0055085	GO:GO:1902476	InterPro:IPR000644
InterPro:IPR014743	UniProt:M4EW02	PFAM:PF00654	PRINTS:PR00762	PRINTS:PR01120	PFscan:PS51371
PANTHER:PTHR11689	PANTHER:PTHR11689:SF67	SMART:SM00116	SUPFAM:SSF54631	SUPFAM:SSF81340	TMHMM:TMhelix
UniParc:UPI00025455F6	SEG:seg	:	:	:	:

Description

AT3G27170 (E=0.0) CLC-B, ATCLC-B | CLC-B (CHLORIDE CHANNEL B); anion channel/ voltage-gated chloride channel

Coordinates

chrA02:-:22087143..22090226

Molecular Weight (calculated)

86120.8 Da

IEP (calculated)

8.461

GRAVY (calculated)

0.291

Length

783 amino acids

Sequence
(BLAST)

001: MGEVTNHIGT SINYNGEERE QGDAESNTLN QPLVKANRKL SSTPLALVGT KVSHIESLDY EINENDLFKH DWRKRSKTQV LQYIFLKWTF ACLVGLFTGL
101: IATLINLAVE NIAGYKLLAV GHFLAQERYV TGLMMFAGAN LGLTLIASVL CVCFAPTAAG PGIPEIKAYL NGIDTPNMFG ATTMFVKIVG SIGAVAAGLD
201: LGKEGPLVHI GTCIASLLGQ GGTDNHRIKW RWLRYFNNDR DRRDLITCGS AAGVCAAFRS PVGGVLFALE EVATWWRSAL LWRTFFSTAV VVVVLRGFIE
301: ICKSGKCGLF GSGGLIMFDV SHVTYTYHVT DIIPVTLIGV IGGVLGSLYN HFLHKVLRLY NLINAKGKIH KVLLSLSVSL FTSVCLYGLP FLATCKPCDP
401: SIKERCPTNG RSGNFKQFHC PKGHYSDLAT LLLTTNVDAV RNIFSSNTPN EFSMGSLWIF FVLYCILGLF TFGIATPSGL FLPIILMGSA YGRMLGGVMG
501: SYTSIDQGLY AVLGAASLMA GSMRMTVSLC VIFLELTNNL LLLPITMIVL LIAKTVGDSF NPSIYDIILH LKGLPFLEAN PEPWMRNLSV GDLGDAKPPV
601: VTLQGVEKVA RIVDVLKNTT HNAFPVLDEA QVVPQVGLAN GAIELHGLIL RAHLVKVLKK RWFLTEKRRT EEWEVREKFP WDELAEREDN FDDVAITSSE
701: MQMYVDLHPL TNTTPYTVME NMSVAKALVL FRQVGLWHLL IVPKIQVSGM SPVVGILTRQ DLRAYNILQA FPHLEKSKGR KAH

Best Arabidopsis Sequence Match ( AT3G27170.1 )
(BLAST)

001: MVEEDLNQIG GNSNYNGEGG DPESNTLNQP LVKANRTLSS TPLALVGAKV SHIESLDYEI NENDLFKHDW RKRSKAQVLQ YVFLKWTLAC LVGLFTGLIA
101: TLINLAVENI AGYKLLAVGH FLTQERYVTG LMVLVGANLG LTLVASVLCV CFAPTAAGPG IPEIKAYLNG VDTPNMFGAT TMIVKIVGSI GAVAAGLDLG
201: KEGPLVHIGS CIASLLGQGG TDNHRIKWRW LRYFNNDRDR RDLITCGSAA GVCAAFRSPV GGVLFALEEV ATWWRSALLW RTFFSTAVVV VVLREFIEIC
301: NSGKCGLFGK GGLIMFDVSH VTYTYHVTDI IPVMLIGVIG GILGSLYNHL LHKVLRLYNL INEKGKIHKV LLSLTVSLFT SVCLYGLPFL AKCKPCDPSI
401: DEICPTNGRS GNFKQFHCPK GYYNDLATLL LTTNDDAVRN LFSSNTPNEF GMGSLWIFFV LYCILGLFTF GIATPSGLFL PIILMGAAYG RMLGAAMGSY
501: TSIDQGLYAV LGAAALMAGS MRMTVSLCVI FLELTNNLLL LPITMIVLLI AKTVGDSFNP SIYDIILHLK GLPFLEANPE PWMRNLTVGE LGDAKPPVVT
601: LQGVEKVSNI VDVLKNTTHN AFPVLDEAEV PQVGLATGAT ELHGLILRAH LVKVLKKRWF LTEKRRTEEW EVREKFPWDE LAEREDNFDD VAITSAEMEM
701: YVDLHPLTNT TPYTVMENMS VAKALVLFRQ VGLRHLLIVP KIQASGMCPV VGILTRQDLR AYNILQAFPL LEKSKGGKTH

Arabidopsis Description

CLC-BChloride channel protein [Source:UniProtKB/TrEMBL;Acc:A0A178VKG6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.