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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG97393
KRH09922
KRH11076
KRH21197
KRH23409
KRH31520
KRH42923
KRH42926
KRH45251
KRH59035
KRH59036
KRH76090

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G40890.1 KRG97393 AT1G27300.1 21798944
AT5G40890.1 KRH31520 AT1G27300.1 21798944
AT5G40890.1 KRH76090 AT1G27300.1 21798944
AT5G40890.1 KRH09922 AT3G16310.1 21798944
AT5G40890.1 KRH23409 AT3G16310.1 21798944
AT5G40890.1 KRH11076 AT4G19030.1 21798944
AT5G40890.1 KRH21197 AT4G19030.1 21798944
AT5G40890.1 KRH42923 AT4G19030.1 21798944
AT5G40890.1 KRH42926 AT4G19030.1 21798944
AT5G40890.1 KRH45251 AT4G19030.1 21798944
AT5G40890.1 KRH59035 AT4G19030.1 21798944
AT5G40890.1 KRH59036 AT4G19030.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRG94508 Soybean plasma membrane 88.8 87.34
KRH06955 Soybean plasma membrane 82.5 86.04
VIT_14s0068g02190.t01 Wine grape plasma membrane 81.72 80.48
CDY11722 Canola plasma membrane 77.99 78.7
Solyc02g068080.2.1 Tomato peroxisome, plasma membrane, vacuole 79.28 78.57
Bra028478.1-P Field mustard plasma membrane 77.86 78.57
CDX67478 Canola plasma membrane 77.86 78.57
Bra030328.1-P Field mustard plasma membrane 78.12 78.22
CDY15925 Canola plasma membrane 77.99 78.09
CDX99630 Canola plasma membrane 77.86 77.96
PGSC0003DMT400017962 Potato peroxisome, plasma membrane, vacuole 78.64 77.93
AT5G40890.1 Thale cress plasma membrane 77.48 77.68
Bra025253.1-P Field mustard plasma membrane 77.61 77.01
CDY34173 Canola plasma membrane 77.22 76.92
AT3G27170.1 Thale cress plasma membrane 77.22 76.92
CDY13685 Canola plasma membrane 77.48 76.88
Bra032985.1-P Field mustard plasma membrane 77.22 76.63
CDX83663 Canola plasma membrane 77.22 76.63
CDY28488 Canola plasma membrane 77.09 76.5
Solyc02g094060.2.1 Tomato plasma membrane 72.2 73.53
PGSC0003DMT400052072 Potato plasma membrane 73.1 73.39
GSMUA_Achr3P16100_001 Banana plasma membrane 66.41 71.17
TraesCS6B01G126400.1 Wheat plasma membrane 68.08 67.22
TraesCS6D01G084300.1 Wheat cytosol, nucleus, plasma membrane 67.95 67.09
TraesCS6B01G126800.1 Wheat plasma membrane 67.18 66.58
TraesCS6A01G098600.1 Wheat plasma membrane 66.41 66.32
EER90148 Sorghum plasma membrane 68.21 66.17
TraesCS6D01G084000.2 Wheat plasma membrane 66.67 66.07
Zm00001d046919_P001 Maize plasma membrane 68.08 66.04
TraesCS6A01G098500.2 Wheat cytosol, peroxisome, plasma membrane 65.89 64.32
HORVU0Hr1G015220.3 Barley cytosol 29.47 55.72
Os12t0438600-01 Rice plasma membrane 10.3 52.63
KRH20183 Soybean plasma membrane 50.06 50.85
KRH38787 Soybean cytosol 50.97 50.19
KRH09287 Soybean cytosol, nucleus, plasma membrane 50.45 49.25
KRH27622 Soybean plasma membrane 43.11 41.82
KRH77868 Soybean plasma membrane 42.99 41.7
Protein Annotations
Gene3D:1.10.3080.10MapMan:24.2.16Gene3D:3.10.580.10UniProt:A0A0R0JZI4EMBL:ACUP02002878InterPro:CBS_dom
InterPro:Cl-channel_coreInterPro:Cl-channel_volt-gatedInterPro:Cl_channel_plnEnsemblPlantsGene:GLYMA_05G077100GO:GO:0003674GO:GO:0005215
GO:GO:0005216GO:GO:0005247GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005773GO:GO:0006810GO:GO:0006811GO:GO:0006821GO:GO:0008150GO:GO:0009671
GO:GO:0009705GO:GO:0015706GO:GO:0016020GO:GO:0016021GO:GO:0034220GO:GO:0055085
GO:GO:1902476GO:GO:1902600InterPro:IPR000644InterPro:IPR014743EnsemblPlants:KRH57669ProteinID:KRH57669
ProteinID:KRH57669.1PFAM:PF00571PFAM:PF00654PRINTS:PR00762PRINTS:PR01120PFscan:PS51371
PANTHER:PTHR11689PANTHER:PTHR11689:SF67SMART:SM00116SUPFAM:SSF54631SUPFAM:SSF81340TMHMM:TMhelix
UniParc:UPI0006ED9D88SEG:seg::::
Description
hypothetical protein
Coordinates
chr5:-:9979195..9983846
Molecular Weight (calculated)
86037.8 Da
IEP (calculated)
7.935
GRAVY (calculated)
0.295
Length
777 amino acids
Sequence
(BLAST)
001: MGEESSLLKE STSINDTNMV EEVEERDPES NPLNEPLLKR NRTLSSNPLA LVGAKVSYIE SLDYEINEND LFKQDWRSRS RTQVLQYIFW KWTLAFLVGL
101: LTGVIATLIN LAVENIAGYK FLAVVNFIQK ERYLRGFLYF TGINFLLTFV ASILCVCFAP TAAGPGIPEI KAYLNGVDTP NMYGATTLFV KIIGSIGAVS
201: AGLDLGKEGP LVHIGSCIAS LLGQGGPDNY RIKWRWLRYF NNDRDRRDLI TCGASSGAPV GGVLFALEEV ATWWRSALLW RTFFSTAVVV VVLRASIELC
301: HKGKCGLFGE GGLIMYDVSD VTVRYNVMDI IPVVIIGVLG GVLGSLYNYL LHKVLRVYNL INQKGKMYKL LLSLSVAIFT SACQYGLPFL AKCTPCDPSL
401: SDVCPTNGRS GNFKQFNCPK GYYNDLATLL LTTNDDAVRN IFSTNTPLEY QPSSIIIFFA LYCILGLITF GIAVPSGLFL PIILMGSGYG RLLGILMGPH
501: TNIDQGLFAV LGAASLMAGS MRMTVSLCVI FLELTNNLLL LPITMIVLLI AKTVGDSFNP SIYEIILHLK GLPFMDANPE PWMRNLTVGE LVDVKPAVVS
601: FKGVEKVANI VNALKNTTHN GFPVMDCGLV PTTGVANEAT ELHGIILRAH LIQVLKKKWF LKERRRTEEW EVREKFTWVE LAEREGNIED VAVTKEEMEM
701: FVDLHPLTNT TPFTVLESMS VAKAMVLFRQ VGLRHMLVVP KYQASGVSPV IGILTRQDLL AYNILTVFPH LAKSKRK
Best Arabidopsis Sequence Match ( AT3G27170.1 )
(BLAST)
001: MVEEDLNQIG GNSNYNGEGG DPESNTLNQP LVKANRTLSS TPLALVGAKV SHIESLDYEI NENDLFKHDW RKRSKAQVLQ YVFLKWTLAC LVGLFTGLIA
101: TLINLAVENI AGYKLLAVGH FLTQERYVTG LMVLVGANLG LTLVASVLCV CFAPTAAGPG IPEIKAYLNG VDTPNMFGAT TMIVKIVGSI GAVAAGLDLG
201: KEGPLVHIGS CIASLLGQGG TDNHRIKWRW LRYFNNDRDR RDLITCGSAA GVCAAFRSPV GGVLFALEEV ATWWRSALLW RTFFSTAVVV VVLREFIEIC
301: NSGKCGLFGK GGLIMFDVSH VTYTYHVTDI IPVMLIGVIG GILGSLYNHL LHKVLRLYNL INEKGKIHKV LLSLTVSLFT SVCLYGLPFL AKCKPCDPSI
401: DEICPTNGRS GNFKQFHCPK GYYNDLATLL LTTNDDAVRN LFSSNTPNEF GMGSLWIFFV LYCILGLFTF GIATPSGLFL PIILMGAAYG RMLGAAMGSY
501: TSIDQGLYAV LGAAALMAGS MRMTVSLCVI FLELTNNLLL LPITMIVLLI AKTVGDSFNP SIYDIILHLK GLPFLEANPE PWMRNLTVGE LGDAKPPVVT
601: LQGVEKVSNI VDVLKNTTHN AFPVLDEAEV PQVGLATGAT ELHGLILRAH LVKVLKKRWF LTEKRRTEEW EVREKFPWDE LAEREDNFDD VAITSAEMEM
701: YVDLHPLTNT TPYTVMENMS VAKALVLFRQ VGLRHLLIVP KIQASGMCPV VGILTRQDLR AYNILQAFPL LEKSKGGKTH
Arabidopsis Description
CLC-BChloride channel protein [Source:UniProtKB/TrEMBL;Acc:A0A178VKG6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.