Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P24170_001 | Banana | plasma membrane | 71.03 | 77.58 |
| GSMUA_Achr6P07410_001 | Banana | plasma membrane | 71.66 | 74.28 |
| GSMUA_Achr3P21820_001 | Banana | plasma membrane | 78.46 | 69.45 |
| GSMUA_Achr5P23490_001 | Banana | plasma membrane | 57.05 | 57.63 |
| GSMUA_Achr6P02920_001 | Banana | plasma membrane | 54.66 | 57.41 |
| GSMUA_Achr3P13250_001 | Banana | cytosol, peroxisome, plasma membrane | 55.04 | 56.1 |
| GSMUA_Achr1P26050_001 | Banana | plasma membrane | 54.28 | 55.83 |
| GSMUA_Achr3P16100_001 | Banana | plasma membrane | 49.5 | 54.21 |
| GSMUA_Achr4P06890_001 | Banana | plasma membrane | 37.53 | 43.82 |
| GSMUA_Achr4P06880_001 | Banana | cytosol | 4.66 | 40.22 |
| GSMUA_Achr7P27080_001 | Banana | mitochondrion, plasma membrane | 11.84 | 33.33 |
Protein Annotations
| Gene3D:1.10.3080.10 | MapMan:24.2.16 | Gene3D:3.10.580.10 | InterPro:CBS_dom | InterPro:Cl-channel_core | InterPro:Cl-channel_volt-gated |
| InterPro:Cl_channel_pln | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005216 | GO:GO:0005247 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0006811 | GO:GO:0006821 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0034220 | GO:GO:0055085 | GO:GO:1902476 | EnsemblPlantsGene:GSMUA_Achr8G08450_001 | EnsemblPlants:GSMUA_Achr8P08450_001 | EnsemblPlants:GSMUA_Achr8T08450_001 |
| InterPro:IPR000644 | InterPro:IPR014743 | UniProt:M0TNP8 | PFAM:PF00571 | PFAM:PF00654 | PRINTS:PR00762 |
| PRINTS:PR01120 | PFscan:PS51371 | PANTHER:PTHR11689 | PANTHER:PTHR11689:SF109 | SMART:SM00116 | SUPFAM:SSF54631 |
| SUPFAM:SSF81340 | TMHMM:TMhelix | UniParc:UPI0002951F8C | SEG:seg | : | : |
Description
Chloride channel protein CLC-c [Source:GMGC_GENE;Acc:GSMUA_Achr8G08450_001]
Coordinates
chr8:-:5648072..5653503
Molecular Weight (calculated)
86918.4 Da
IEP (calculated)
6.886
GRAVY (calculated)
0.251
Length
794 amino acids
Sequence
(BLAST)
(BLAST)
001: MDHRESDEVV ESSVGGVAPR DMENNASSFF DDEEMGIRDP LLRWQTGNTT SQLAVVGANV CPIESLDYEV VENDIYKEDW RSRKKEQIFQ YVLLKWTFAL
101: LIGLATGLVG FFNNLAVENI AGFKWLLTSN LMLKHRYHEA FAVFAGCNAS LAAAASALCA YLAPAAAGSG IPEVKAYLNG IDAHPILAPS TLFVKCSIDQ
201: PYFHINLQYN SRFNLLLTHY CSHQASSWFI EDTYILEETE IFFEIFGSIC GVSAGFVLGK EGPMVHTGAC IASLLGQGGS RKYHLTWTWL RYFKNDRDRR
301: DLITCGAAAG VAAAFRAPLG GVLFAYEEAA SWWRSALLWR TFFTTAVVAV VLRTFVYFCR SGNCGLFGKG GLIMFDLSSN ISAYGTPDLI AVVLLGVIGG
401: VLGSLYNFLI DKTLRKYSII NERGVPFKIL HAVAISLLTS CCSYGLPWLV KCTPCPPDIL DQCPTIGRSG NYKNFLCPPN HYNDLASLFL NTNDDAIRNL
501: FSGGTNNEFH ISTLIIFFAG VYCLGIVTYG IAIPSGLFIP VILAGASYGR LVGTLLGPIS KLDEGLFALL GAASFLGGTM RMTVSVCVIL LELTNDLMIL
601: PFAHAEPYMR NLKAGDVVSG PLITLAGVEK VGNIVHALKW TRHNGFPVVN EPPFSDAREL CGLALKSHLL VLLKGKGFTK ERVSTGAADV LRRFDPFDFA
701: KAGSGKGVKL EELDIDDAEM EMYVDLHPIV NRSPYTVKET MSLAKAAVLF RELGLRHLCV VPKSPGGSPV AGILTRHDFM PEHILGRFPH LKNH
101: LIGLATGLVG FFNNLAVENI AGFKWLLTSN LMLKHRYHEA FAVFAGCNAS LAAAASALCA YLAPAAAGSG IPEVKAYLNG IDAHPILAPS TLFVKCSIDQ
201: PYFHINLQYN SRFNLLLTHY CSHQASSWFI EDTYILEETE IFFEIFGSIC GVSAGFVLGK EGPMVHTGAC IASLLGQGGS RKYHLTWTWL RYFKNDRDRR
301: DLITCGAAAG VAAAFRAPLG GVLFAYEEAA SWWRSALLWR TFFTTAVVAV VLRTFVYFCR SGNCGLFGKG GLIMFDLSSN ISAYGTPDLI AVVLLGVIGG
401: VLGSLYNFLI DKTLRKYSII NERGVPFKIL HAVAISLLTS CCSYGLPWLV KCTPCPPDIL DQCPTIGRSG NYKNFLCPPN HYNDLASLFL NTNDDAIRNL
501: FSGGTNNEFH ISTLIIFFAG VYCLGIVTYG IAIPSGLFIP VILAGASYGR LVGTLLGPIS KLDEGLFALL GAASFLGGTM RMTVSVCVIL LELTNDLMIL
601: PFAHAEPYMR NLKAGDVVSG PLITLAGVEK VGNIVHALKW TRHNGFPVVN EPPFSDAREL CGLALKSHLL VLLKGKGFTK ERVSTGAADV LRRFDPFDFA
701: KAGSGKGVKL EELDIDDAEM EMYVDLHPIV NRSPYTVKET MSLAKAAVLF RELGLRHLCV VPKSPGGSPV AGILTRHDFM PEHILGRFPH LKNH
001: MDDRHEGDHH DIEVEGGALH GFERKISGIL DDGSVGFRQP LLARNRKNTT SQIAIVGANT CPIESLDYEI FENDFFKQDW RSRKKIEILQ YTFLKWALAF
101: LIGLATGLVG FLNNLGVENI AGFKLLLIGN LMLKEKYFQA FFAFAGCNLI LATAAASLCA FIAPAAAGSG IPEVKAYLNG IDAYSILAPS TLFVKIFGSI
201: FGVAAGFVVG KEGPMVHTGA CIANLLGQGG SKKYRLTWKW LRFFKNDRDR RDLITCGAAA GVAAAFRAPV GGVLFALEEA ASWWRNALLW RTFFTTAVVA
301: VVLRSLIEFC RSGRCGLFGK GGLIMFDVNS GPVLYSTPDL LAIVFLGVIG GVLGSLYNYL VDKVLRTYSI INEKGPRFKI MLVMAVSILS SCCAFGLPWL
401: SQCTPCPIGI EEGKCPSVGR SSIYKSFQCP PNHYNDLSSL LLNTNDDAIR NLFTSRSENE FHISTLAIFF VAVYCLGIIT YGIAIPSGLF IPVILAGASY
501: GRLVGRLLGP VSQLDVGLFS LLGAASFLGG TMRMTVSLCV ILLELTNNLL MLPLVMLVLL ISKTVADCFN RGVYDQIVTM KGLPYMEDHA EPYMRNLVAK
601: DVVSGALISF SRVEKVGVIW QALKMTRHNG FPVIDEPPFT EASELCGIAL RSHLLVLLQG KKFSKQRTTF GSQILRSCKA RDFGKAGLGK GLKIEDLDLS
701: EEEMEMYVDL HPITNTSPYT VLETLSLAKA AILFRQLGLR HLCVVPKTPG RPPIVGILTR HDFMPEHVLG LYPHIDPLK
101: LIGLATGLVG FLNNLGVENI AGFKLLLIGN LMLKEKYFQA FFAFAGCNLI LATAAASLCA FIAPAAAGSG IPEVKAYLNG IDAYSILAPS TLFVKIFGSI
201: FGVAAGFVVG KEGPMVHTGA CIANLLGQGG SKKYRLTWKW LRFFKNDRDR RDLITCGAAA GVAAAFRAPV GGVLFALEEA ASWWRNALLW RTFFTTAVVA
301: VVLRSLIEFC RSGRCGLFGK GGLIMFDVNS GPVLYSTPDL LAIVFLGVIG GVLGSLYNYL VDKVLRTYSI INEKGPRFKI MLVMAVSILS SCCAFGLPWL
401: SQCTPCPIGI EEGKCPSVGR SSIYKSFQCP PNHYNDLSSL LLNTNDDAIR NLFTSRSENE FHISTLAIFF VAVYCLGIIT YGIAIPSGLF IPVILAGASY
501: GRLVGRLLGP VSQLDVGLFS LLGAASFLGG TMRMTVSLCV ILLELTNNLL MLPLVMLVLL ISKTVADCFN RGVYDQIVTM KGLPYMEDHA EPYMRNLVAK
601: DVVSGALISF SRVEKVGVIW QALKMTRHNG FPVIDEPPFT EASELCGIAL RSHLLVLLQG KKFSKQRTTF GSQILRSCKA RDFGKAGLGK GLKIEDLDLS
701: EEEMEMYVDL HPITNTSPYT VLETLSLAKA AILFRQLGLR HLCVVPKTPG RPPIVGILTR HDFMPEHVLG LYPHIDPLK
Arabidopsis Description
CLC-CChloride channel protein CLC-c [Source:UniProtKB/Swiss-Prot;Acc:Q96282]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.