Factsheet for GSMUA_Achr3P07200_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G77760.1	GSMUA_Achr11P...	AT3G48150.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P15480_001	Banana	cytosol	57.24	85.75
GSMUA_Achr8P23160_001	Banana	mitochondrion	49.42	81.29
Zm00001d049995_P001	Maize	cytosol, mitochondrion, peroxisome, plastid	44.62	74.37
Zm00001d031769_P001	Maize	mitochondrion	44.53	72.82
CDY68886	Canola	cytosol, mitochondrion	46.58	72.08
EES13985	Sorghum	cytosol, mitochondrion, peroxisome, plastid	58.93	71.99
Os08t0468100-01	Rice	plastid	58.04	71.29
TraesCS6A01G017500.2	Wheat	cytosol, plastid	57.24	70.46
Os08t0468700-00	Rice	plastid	57.33	70.41
TraesCS7D01G073700.1	Wheat	cytosol, nucleus, peroxisome	54.49	70.38
TraesCS6D01G020700.1	Wheat	cytosol, plastid	57.16	70.35
TraesCS6B01G024900.1	Wheat	cytosol, plastid	57.16	70.35
TraesCS7A01G078500.1	Wheat	cytosol	53.87	69.98
VIT_18s0001g03910.t01	Wine grape	plastid	56.53	69.97
Zm00001d052139_P001	Maize	cytosol, mitochondrion, peroxisome	40.27	69.91
Zm00001d018206_P001	Maize	peroxisome	40.53	69.09
TraesCS4A01G376700.1	Wheat	cytosol	55.02	69.08
HORVU6Hr1G003300.1	Barley	mitochondrion	57.87	68.45
EES07601	Sorghum	cytosol, mitochondrion, peroxisome	53.96	68.05
Os02t0770800-01	Rice	cytosol	53.69	67.94
TraesCS6D01G306000.1	Wheat	cytosol, peroxisome, plastid	54.04	67.93
Solyc11g013810.1.1	Tomato	cytosol, nucleus	55.02	67.87
PGSC0003DMT400077648	Potato	cytosol	54.93	67.84
KRH18816	Soybean	cytosol, mitochondrion, peroxisome	53.42	67.83
TraesCS6B01G356800.1	Wheat	cytosol, peroxisome, plastid	54.04	67.78
KRH53180	Soybean	cytosol, mitochondrion, peroxisome	53.33	67.42
TraesCS6A01G326200.1	Wheat	plastid	53.78	67.3
Bra008333.1-P	Field mustard	plastid	52.44	65.12
Bra003670.1-P	Field mustard	plastid	52.44	64.84
CDX79234	Canola	plastid	52.44	64.76
CDX68044	Canola	plastid	52.36	64.73
KRH16605	Soybean	cytosol	50.76	64.45
Zm00001d017025_P001	Maize	cytosol	50.93	64.38
Bra015656.1-P	Field mustard	cytosol	50.67	64.04
KRH18814	Soybean	cytosol, mitochondrion, plastid	26.04	63.97
CDX88386	Canola	cytosol, plastid	50.76	63.87
AT1G37130.1	Thale cress	cytosol	51.91	63.69
AT1G77760.1	Thale cress	cytosol	51.73	63.47
KRH16606	Soybean	cytosol	48.36	62.31
CDY26836	Canola	cytosol	30.84	62.3
OQU85223	Sorghum	cytosol	50.84	61.97
CDX87505	Canola	cytosol, mitochondrion, peroxisome, plastid	15.29	61.65
CDX87504	Canola	cytosol	27.38	59.57
GSMUA_Achr5P05820_001	Banana	mitochondrion, nucleus, peroxisome	23.82	58.64
GSMUA_Achr5P05830_001	Banana	cytosol	15.11	47.49
GSMUA_Achr8P21540_001	Banana	endoplasmic reticulum	9.16	37.18
GSMUA_Achr10P...	Banana	mitochondrion	9.33	31.72

Protein Annotations

Gene3D:2.40.30.10	Gene3D:2.60.40.650	MapMan:25.1.4.1	Gene3D:3.10.120.10	Gene3D:3.40.50.80	Gene3D:3.90.420.10
InterPro:Cyt_B5-like_heme/steroid-bd	InterPro:Cyt_B5-like_heme/steroid_sf	InterPro:Cyt_B5_heme-BS	InterPro:DUF1644	InterPro:Fd_Rdtase_FAD-bd	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016491	GO:GO:0020037	GO:GO:0030151	GO:GO:0042128	GO:GO:0046872	GO:GO:0055114
EnsemblPlantsGene:GSMUA_Achr3G07200_001	EnsemblPlants:GSMUA_Achr3P07200_001	EnsemblPlants:GSMUA_Achr3T07200_001	InterPro:IPR001199	InterPro:IPR017927	InterPro:IPR036374
InterPro:IPR036400	InterPro:Ig_E-set	UniProt:M0SCI7	InterPro:MoCF_OxRdtse_dimer	InterPro:Mopterin_OxRdtase_euk	InterPro:NADH-Cyt_B5_reductase
InterPro:OxRdtase_FAD-bd_dom	InterPro:OxRdtase_FAD/NAD-bd	InterPro:OxRdtase_Mopterin-bd_dom	InterPro:OxRdtase_Mopterin-bd_sf	PFAM:PF00173	PFAM:PF00174
PFAM:PF00175	PFAM:PF00970	PFAM:PF03404	PFAM:PF07800	PRINTS:PR00363	PRINTS:PR00371
PRINTS:PR00406	PRINTS:PR00407	ScanProsite:PS00191	PFscan:PS50255	PFscan:PS51384	PANTHER:PTHR19370
PANTHER:PTHR19370:SF182	InterPro:Riboflavin_synthase-like_b-brl	SMART:SM01117	SUPFAM:SSF52343	SUPFAM:SSF55856	SUPFAM:SSF56524
SUPFAM:SSF63380	SUPFAM:SSF81296	UniParc:UPI00029693C6	SEG:seg	:	:

Description

Nitrate reductase [NADH] 1 [Source:GMGC_GENE;Acc:GSMUA_Achr3G07200_001]

Coordinates

chr3:+:4859062..4874657

Molecular Weight (calculated)

127472.0 Da

IEP (calculated)

7.768

GRAVY (calculated)

-0.463

Length

1125 amino acids

Sequence
(BLAST)

0001: MEYPHNAVLL LCSSHDKGCR PYMCGTSYRH SNCLDQFKKA YTKMSPSHYD PLTCPLCRGQ VKGWTVVDPA REYLNNKKRS CMQDSCSFVG TYKELSKHVR
0101: SEHPSANPHE VDPVLEQKWR MLEHERERQD VISTIRSSMP RSVVFGDYVI EMSNGELNTD DEVGDDHVDH DLENRGITRS ILYFFLRESA TRLMRLHRDN
0201: GEPPERGNDN LVDAYSLDGD DDIAPITSQG SRLGILRSER RHRRRRNMSR ARPHLKRTLF SPVMAASVDN RQFGHLEPRN GLVSPVRAVG KKFGTHHRSD
0301: SPVRGCSFSP LAPGKDNGTR YYDDDDEDED EVVVDWTKLY GGRHLEVEPS VRDPRDEGTA DSWIERNPSL IRLTGKHPFN CEPPLTRLMH YGFITPVPLH
0401: YVRNHGALVR DFPPVEIPVT LVCAGNRRKE QNMVHQTIGF NWGPAAVSTT VWRGVRLRDV LRRCGVMGRK DGALFVCFEG AEDLPGGGGS KYGTSLRREV
0501: AMDPSRDVML AYMQNGELLT PDHGFPVRVI IPGFVGGRMV KWLKRIIVAP QESNSYYHHK DNRVLPSHVD AELANAEAWW YKPEYIINEL NINSVITTPG
0601: HDEILPINAF TTQRPYTMKG YAYSGGGRKV TRVEVTLNGG ETWLVCALDH PEKPNKYGKY WCWCFWSLEV EVLDVLSSKE VAVRAWDESL NTQPEKLIWN
0701: VMGMMNNCWF KVKVNVCRPH KGEIGLVFEH PTQPGNQSGG WMARQKHLET SEAPTLKKST STPFMNTSSK QYTMSEVRKH ASRESAWIVV HGHVYDCTAF
0801: VKDHPGGADS ILINAGADCT EEFDAIHSDK AKALLDTYRI GELIPSGYCK LVAKKTISHD VRLFKFALPS ADQVLGLPIG KHIFLCATID GKLCMRPYTP
0901: TSTVDEVGHF ELLIKVYFKG ENPKFPNGGL MSQHLESLTL GSTLDIKGPV GHIEYNGRGN FVVNGKPRFA KRLAMIAGGT GITPVYQVIQ AVLRDPEDRT
1001: EMHLVYANRS EDDILLWDEL DGWARDHPEQ FKVWYVINEA KRGEWRYSTG FVTERILRDH IPMGGSDDTL ALACGPPPMI QFAVVPNLEK MKYDTANSLL
1101: LGLERKRVIC IRSFIALRFI YVMLY

Best Arabidopsis Sequence Match ( AT1G77760.1 )
(BLAST)

001: MATSVDNRHY PTMNGVAHAF KPPLVPSPRS FDRHRHQNQT LDVILTETKI VKETEVITTV VDSYDDSSSD DEDESHNRNV PYYKELVKKS NSDLEPSILD
101: PRDESTADSW IQRNSSMLRL TGKHPFNAEA PLPRLMHHGF ITPVPLHYVR NHGAVPKANW SDWSIEITGL VKRPAKFTME ELISEFPSRE FPVTLVCAGN
201: RRKEQNMVKQ TIGFNWGSAG VSTSLWKGIP LSEILRRCGI YSRRGGALNV CFEGAEDLPG GGGSKYGTSI KKEMAMDPAR DIILAYMQNG ELLTPDHGFP
301: VRVIVPGFIG GRMVKWLKRI IVTPQESDSY YHYKDNRVLP SLVDAELANS EAWWYKPEYI INELNINSVI TTPGHAEILP INAFTTQKPY TLKGYAYSGG
401: GKKVTRVEVT LDGGDTWSVC ELDHQEKPNK YGKFWCWCFW SLDVEVLDLL SAKDVAVRAW DESFNTQPDK LIWNLMGMMN NCWFRIRTNV CKPHRGEIGI
501: VFEHPTRPGN QSGGWMAKER QLEISSESNN TLKKSVSSPF MNTASKMYSI SEVRKHNTAD SAWIIVHGHI YDCTRFLKDH PGGTDSILIN AGTDCTEEFE
601: AIHSDKAKKL LEDYRIGELI TTGYDSSPNV SVHGASNFGP LLAPIKELTP QKNIALVNPR EKIPVRLIEK TSISHDVRKF RFALPSEDQQ LGLPVGKHVF
701: VCANINDKLC LRAYTPTSAI DAVGHIDLVV KVYFKDVHPR FPNGGLMSQH LDSLPIGSMI DIKGPLGHIE YKGKGNFLVS GKPKFAKKLA MLAGGTGITP
801: IYQIIQSILS DPEDETEMYV VYANRTEDDI LVREELEGWA SKHKERLKIW YVVEIAKEGW SYSTGFITEA VLREHIPEGL EGESLALACG PPPMIQFALQ
901: PNLEKMGYNV KEDLLIF

Arabidopsis Description

NIA1Nitrate reductase [Source:UniProtKB/TrEMBL;Acc:A0A178WBR8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.