CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDY36901
CDY44976
CDY58069
CDY58070
CDY70805

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G77760.1	CDY36901	AT3G48150.1	21798944
AT1G77760.1	CDY44976	AT3G48150.1	21798944
AT1G77760.1	CDY58069	AT3G48150.1	21798944
AT1G77760.1	CDY58070	AT3G48150.1	21798944
AT1G77760.1	CDY70805	AT3G48150.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87505	Canola	cytosol, mitochondrion, peroxisome, plastid	43.99	87.81
CDY68886	Canola	cytosol, mitochondrion	90.31	69.19
KRH18814	Soybean	cytosol, mitochondrion, plastid	49.19	59.83
Bra008333.1-P	Field mustard	plastid	91.56	56.29
CDX68044	Canola	plastid	87.25	53.41
CDX79234	Canola	plastid	87.07	53.24
AT1G77760.1	Thale cress	cytosol	85.82	52.13
CDX88386	Canola	cytosol, plastid	80.61	50.22
GSMUA_Achr8P23160_001	Banana	mitochondrion	56.55	46.05
KRH18816	Soybean	cytosol, mitochondrion, peroxisome	72.17	45.37
VIT_18s0001g03910.t01	Wine grape	plastid	71.99	44.11
KRH53180	Soybean	cytosol, mitochondrion, peroxisome	70.2	43.93
PGSC0003DMT400077648	Potato	cytosol	71.45	43.69
Solyc11g013810.1.1	Tomato	cytosol, nucleus	71.27	43.53
KRH16605	Soybean	cytosol	67.68	42.55
KRH16606	Soybean	cytosol	65.71	41.92
EES13985	Sorghum	cytosol, mitochondrion, peroxisome, plastid	63.91	38.65
Os08t0468700-00	Rice	plastid	63.55	38.65
Os08t0468100-01	Rice	plastid	63.55	38.65
TraesCS7D01G073700.1	Wheat	cytosol, nucleus, peroxisome	60.14	38.46
TraesCS7A01G078500.1	Wheat	cytosol	59.6	38.34
TraesCS6A01G017500.2	Wheat	cytosol, plastid	62.48	38.07
TraesCS6D01G020700.1	Wheat	cytosol, plastid	62.3	37.97
TraesCS6B01G024900.1	Wheat	cytosol, plastid	62.3	37.97
Os02t0770800-01	Rice	cytosol	60.32	37.8
TraesCS6D01G306000.1	Wheat	cytosol, peroxisome, plastid	60.5	37.65
EES07601	Sorghum	cytosol, mitochondrion, peroxisome	59.78	37.33
TraesCS4A01G376700.1	Wheat	cytosol	59.96	37.28
TraesCS6A01G326200.1	Wheat	plastid	59.6	36.93
TraesCS6B01G356800.1	Wheat	cytosol, peroxisome, plastid	59.43	36.9
HORVU6Hr1G003300.1	Barley	mitochondrion	62.3	36.49
GSMUA_Achr9P15480_001	Banana	cytosol	49.01	36.35
Zm00001d017025_P001	Maize	cytosol	56.73	35.51
CDY63711	Canola	cytosol	14.0	35.29
OQU85223	Sorghum	cytosol	57.45	34.67
CDY59316	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	16.88	33.45
CDY02688	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	16.88	33.45
CDY38457	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	16.16	32.03
CDX78759	Canola	endoplasmic reticulum	16.16	32.03
CDX70774	Canola	endoplasmic reticulum	15.44	31.62
GSMUA_Achr3P07200_001	Banana	cytosol	62.3	30.84
GSMUA_Achr5P05830_001	Banana	cytosol	18.85	29.33
Zm00001d031769_P001	Maize	mitochondrion	36.09	29.22
Zm00001d052139_P001	Maize	cytosol, mitochondrion, peroxisome	33.75	29.01
Zm00001d049995_P001	Maize	cytosol, mitochondrion, peroxisome, plastid	34.65	28.59
Zm00001d018206_P001	Maize	peroxisome	33.39	28.18
GSMUA_Achr5P05820_001	Banana	mitochondrion, nucleus, peroxisome	22.08	26.91
CDY28560	Canola	endoplasmic reticulum	6.64	19.37
CDX87504	Canola	cytosol	14.0	15.09
CDY16891	Canola	golgi, plasma membrane, vacuole	16.16	11.32

Protein Annotations

Gene3D:2.40.30.10	Gene3D:2.60.40.650	MapMan:25.1.4.1	Gene3D:3.10.120.10	Gene3D:3.40.50.80	GO:A0A078GNB8
UniProt:A0A078GNB8	EnsemblPlants:CDY26836	ProteinID:CDY26836	ProteinID:CDY26836.1	InterPro:Cyt_B5-like_heme/steroid-bd	InterPro:Cyt_B5-like_heme/steroid_sf
InterPro:Cyt_B5_heme-BS	InterPro:Fd_Rdtase_FAD-bd	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0020037	GO:GO:0030151	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00036494001	InterPro:IPR001199
InterPro:IPR017927	InterPro:IPR036400	InterPro:Ig_E-set	InterPro:MoCF_OxRdtse_dimer	InterPro:Mopterin_OxRdtase_euk	InterPro:NADH-Cyt_B5_reductase
InterPro:OxRdtase_FAD-bd_dom	InterPro:OxRdtase_FAD/NAD-bd	PFAM:PF00173	PFAM:PF00175	PFAM:PF00970	PFAM:PF03404
PRINTS:PR00363	PRINTS:PR00371	PRINTS:PR00406	PRINTS:PR00407	ScanProsite:PS00191	PFscan:PS50255
PFscan:PS51384	PANTHER:PTHR19370	PANTHER:PTHR19370:SF182	InterPro:Riboflavin_synthase-like_b-brl	SMART:SM01117	SUPFAM:SSF52343
SUPFAM:SSF55856	SUPFAM:SSF63380	SUPFAM:SSF81296	TMHMM:TMhelix	UniParc:UPI0004EE2A90	SEG:seg

Description

BnaA02g18610DBnaA02g18610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GNB8]

Coordinates

chrLK032195:-:12865..20962

Molecular Weight (calculated)

63025.8 Da

IEP (calculated)

6.206

GRAVY (calculated)

-0.256

Length

557 amino acids

Sequence
(BLAST)

001: MVYYYFCEET LCRDYHLGSK NPVEVTLDGG ETWSVCELDH QEKPNKYGKF WCWCFWSLDV EVLDLLSAKD VAVRAWDESF NTQPDKLIWN LMGMMNNCWF
101: RIRTNVCKPH RGEIGIVFEH PTRPGNQSGG WMAKERQLEI SSESNPTLKK SVSSPFMNTS SKMYSISDVR KHNSVESAWI IVHGHVYDCT RFLKDHPGGT
201: DSILINAGTD CTEEFEAIHS DKAKKILEDY RIGELITTGY DSSPNVSVHG GSNVAPLLAP IKELSPPKHI ALVNPREKVP DKLIEKTSIS HDVRRFRFAL
301: PSEDQQLGLP VGKHIFLCAN INDKLCLRAY TPTSTVNAVG HIDLVVKVYF KDVHPRFPNG GLMSQHLDSL SIGAVLDIKG PLGHIEYKGK GNFMVNGKPK
401: FAKKLAMLAG GTGITPIYQV IQSILSDPED ETEMYVVYAN RTEDDILVRE ELEGWANKHK ERLKLWYVVE IAKEGWNYST GFITEDVLRE HVPEGLEGES
501: LALACGPPPM IQFALQPNLE KMGYNSLYSK MYNVLYLSFM LLLMIMVFIM INDESIT

Best Arabidopsis Sequence Match ( AT1G77760.1 )
(BLAST)

001: MATSVDNRHY PTMNGVAHAF KPPLVPSPRS FDRHRHQNQT LDVILTETKI VKETEVITTV VDSYDDSSSD DEDESHNRNV PYYKELVKKS NSDLEPSILD
101: PRDESTADSW IQRNSSMLRL TGKHPFNAEA PLPRLMHHGF ITPVPLHYVR NHGAVPKANW SDWSIEITGL VKRPAKFTME ELISEFPSRE FPVTLVCAGN
201: RRKEQNMVKQ TIGFNWGSAG VSTSLWKGIP LSEILRRCGI YSRRGGALNV CFEGAEDLPG GGGSKYGTSI KKEMAMDPAR DIILAYMQNG ELLTPDHGFP
301: VRVIVPGFIG GRMVKWLKRI IVTPQESDSY YHYKDNRVLP SLVDAELANS EAWWYKPEYI INELNINSVI TTPGHAEILP INAFTTQKPY TLKGYAYSGG
401: GKKVTRVEVT LDGGDTWSVC ELDHQEKPNK YGKFWCWCFW SLDVEVLDLL SAKDVAVRAW DESFNTQPDK LIWNLMGMMN NCWFRIRTNV CKPHRGEIGI
501: VFEHPTRPGN QSGGWMAKER QLEISSESNN TLKKSVSSPF MNTASKMYSI SEVRKHNTAD SAWIIVHGHI YDCTRFLKDH PGGTDSILIN AGTDCTEEFE
601: AIHSDKAKKL LEDYRIGELI TTGYDSSPNV SVHGASNFGP LLAPIKELTP QKNIALVNPR EKIPVRLIEK TSISHDVRKF RFALPSEDQQ LGLPVGKHVF
701: VCANINDKLC LRAYTPTSAI DAVGHIDLVV KVYFKDVHPR FPNGGLMSQH LDSLPIGSMI DIKGPLGHIE YKGKGNFLVS GKPKFAKKLA MLAGGTGITP
801: IYQIIQSILS DPEDETEMYV VYANRTEDDI LVREELEGWA SKHKERLKIW YVVEIAKEGW SYSTGFITEA VLREHIPEGL EGESLALACG PPPMIQFALQ
901: PNLEKMGYNV KEDLLIF

Arabidopsis Description

NIA1Nitrate reductase [Source:UniProtKB/TrEMBL;Acc:A0A178WBR8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.