Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, mitochondrion, plastid, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- peroxisome 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002104.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 98.22 | 98.22 |
| CDY59316 | Canola | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 95.37 | 95.37 |
| CDY02688 | Canola | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 94.66 | 94.66 |
| AT5G17770.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole | 93.59 | 93.59 |
| CDX78759 | Canola | endoplasmic reticulum | 91.81 | 91.81 |
| CDX70774 | Canola | endoplasmic reticulum | 87.9 | 90.81 |
| KRG94933 | Soybean | mitochondrion | 75.09 | 87.55 |
| CDY63711 | Canola | cytosol | 66.19 | 84.16 |
| PGSC0003DMT400072515 | Potato | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 81.85 | 82.73 |
| KRH64963 | Soybean | endoplasmic reticulum | 81.85 | 82.73 |
| Solyc10g081440.1.1 | Tomato | extracellular, plastid | 81.14 | 82.01 |
| VIT_08s0056g01150.t01 | Wine grape | endoplasmic reticulum | 79.0 | 80.14 |
| Os05t0488900-01 | Rice | endoplasmic reticulum | 79.36 | 79.08 |
| TraesCS1B01G316400.1 | Wheat | unclear | 78.29 | 78.85 |
| EES18413 | Sorghum | plastid | 78.29 | 78.85 |
| GSMUA_Achr8P21540_001 | Banana | endoplasmic reticulum | 77.22 | 78.34 |
| TraesCS1D01G305400.1 | Wheat | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 77.58 | 78.14 |
| TraesCS1A01G305700.1 | Wheat | golgi | 77.58 | 78.14 |
| EES03792 | Sorghum | endoplasmic reticulum | 76.87 | 77.42 |
| TraesCS3D01G332300.1 | Wheat | unclear | 76.87 | 77.42 |
| TraesCS3B01G370400.1 | Wheat | endoplasmic reticulum | 76.87 | 77.42 |
| TraesCS3A01G338700.1 | Wheat | golgi | 76.87 | 77.42 |
| Os01t0814900-01 | Rice | plasma membrane | 74.73 | 75.27 |
| Zm00001d038529_P003 | Maize | plasma membrane | 78.29 | 71.2 |
| Zm00001d043098_P002 | Maize | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 76.16 | 69.93 |
| HORVU3Hr1G079960.7 | Barley | endoplasmic reticulum | 53.02 | 67.42 |
| Zm00001d017490_P001 | Maize | mitochondrion | 21.35 | 58.25 |
| CDY28560 | Canola | endoplasmic reticulum | 29.89 | 43.98 |
| CDY16891 | Canola | golgi, plasma membrane, vacuole | 98.22 | 34.72 |
| CDX87505 | Canola | cytosol, mitochondrion, peroxisome, plastid | 33.45 | 33.69 |
| CDY26836 | Canola | cytosol | 32.03 | 16.16 |
| CDY68886 | Canola | cytosol, mitochondrion | 33.81 | 13.07 |
| CDX88386 | Canola | cytosol, plastid | 35.94 | 11.3 |
| CDX68044 | Canola | plastid | 34.88 | 10.77 |
| CDX79234 | Canola | plastid | 34.52 | 10.65 |
| CDX87504 | Canola | cytosol | 5.69 | 3.09 |
Protein Annotations
| Gene3D:2.40.30.10 | Gene3D:3.40.50.80 | MapMan:50.1.6 | GO:A0A078HKQ0 | UniProt:A0A078HKQ0 | EnsemblPlants:CDY38457 |
| ProteinID:CDY38457 | ProteinID:CDY38457.1 | InterPro:Fd_Rdtase_FAD-bd | InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004128 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016491 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00065900001 | InterPro:IPR017927 | InterPro:NADH-Cyt_B5_reductase | InterPro:OxRdtase_FAD-bd_dom |
| InterPro:OxRdtase_FAD/NAD-bd | PFAM:PF00175 | PFAM:PF00970 | PRINTS:PR00371 | PRINTS:PR00406 | PFscan:PS51384 |
| PANTHER:PTHR19370 | PANTHER:PTHR19370:SF175 | InterPro:Riboflavin_synthase-like_b-brl | SUPFAM:SSF52343 | SUPFAM:SSF63380 | TMHMM:TMhelix |
| UniParc:UPI0004EF1B2B | SEG:seg | : | : | : | : |
Description
BnaA10g17010DNADH-cytochrome b5 reductase [Source:UniProtKB/TrEMBL;Acc:A0A078HKQ0]
Coordinates
chrLK032424:-:123064..125221
Molecular Weight (calculated)
31300.9 Da
IEP (calculated)
7.981
GRAVY (calculated)
-0.218
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTEFLRTLD RQILLGVFVA FVAVGAGAAY YLSSSKKRRG CLDPENFKEF KLVTKEQLSH NVAKFVFELP TSSSVLGLPI GQHISCRGKD AQGEDVIKPY
101: TPTTLDSDLG RFELVIKMYP QGRMSHHFRE MRVGDHLAVK GPKGRFKYQP GQFRAFGMLA GGSGITPMFQ VARAILENPA DKTKVHLIYA NVTSEDILLK
201: EELESLTANY PDQFKIYYVL NQPPETWDGG VGFVSKEMIQ SHCPAPASDI QILRCGPPPM NKAMAANLEA LGYSPEMQFQ F
101: TPTTLDSDLG RFELVIKMYP QGRMSHHFRE MRVGDHLAVK GPKGRFKYQP GQFRAFGMLA GGSGITPMFQ VARAILENPA DKTKVHLIYA NVTSEDILLK
201: EELESLTANY PDQFKIYYVL NQPPETWDGG VGFVSKEMIQ SHCPAPASDI QILRCGPPPM NKAMAANLEA LGYSPEMQFQ F
001: MDTEFLRTLD RQILLGVFVA FVAVGAGAAY FLTSSKKRRV CLDPENFKEF KLVKRHQLSH NVAKFVFELP TSTSVLGLPI GQHISCRGKD GQGEDVIKPY
101: TPTTLDSDVG RFELVIKMYP QGRMSHHFRE MRVGDHLAVK GPKGRFKYQP GQFRAFGMLA GGSGITPMFQ VARAILENPT DKTKVHLIYA NVTYDDILLK
201: EELEGLTTNY PEQFKIFYVL NQPPEVWDGG VGFVSKEMIQ THCPAPASDI QILRCGPPPM NKAMAANLEA LGYSPEMQFQ F
101: TPTTLDSDVG RFELVIKMYP QGRMSHHFRE MRVGDHLAVK GPKGRFKYQP GQFRAFGMLA GGSGITPMFQ VARAILENPT DKTKVHLIYA NVTYDDILLK
201: EELEGLTTNY PEQFKIFYVL NQPPEVWDGG VGFVSKEMIQ THCPAPASDI QILRCGPPPM NKAMAANLEA LGYSPEMQFQ F
Arabidopsis Description
CBR1NADH-cytochrome b5 reductase [Source:UniProtKB/TrEMBL;Acc:A0A178US77]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,mitochondrion,cytosol,plasma membrane,golgi]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,mitochondrion,cytosol,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.