Factsheet for Bra002104.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, mitochondrion, plastid, plasma membrane, golgi

Predictor Summary:

cytosol 1
mitochondrion 3
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, peroxisome, plastid, secretory
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	mitochondrion
iPSORT:	secretory
MultiLoc:	peroxisome
Plant-mPloc:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38457	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	98.22	98.22
Bra023636.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	84.7	94.82
AT5G17770.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	92.88	92.88
Bra006419.1-P	Field mustard	endoplasmic reticulum	92.17	91.84
KRG94933	Soybean	mitochondrion	74.38	86.72
PGSC0003DMT400072515	Potato	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	81.85	82.73
Solyc10g081440.1.1	Tomato	extracellular, plastid	81.49	82.37
KRH64963	Soybean	endoplasmic reticulum	81.14	82.01
VIT_08s0056g01150.t01	Wine grape	endoplasmic reticulum	79.36	80.51
EES18413	Sorghum	plastid	78.29	78.85
TraesCS1B01G316400.1	Wheat	unclear	77.94	78.49
Os05t0488900-01	Rice	endoplasmic reticulum	78.29	78.01
GSMUA_Achr8P21540_001	Banana	endoplasmic reticulum	76.87	77.98
TraesCS1A01G305700.1	Wheat	golgi	77.22	77.78
TraesCS1D01G305400.1	Wheat	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	77.22	77.78
TraesCS3B01G370400.1	Wheat	endoplasmic reticulum	76.16	76.7
TraesCS3D01G332300.1	Wheat	unclear	76.16	76.7
TraesCS3A01G338700.1	Wheat	golgi	76.16	76.7
EES03792	Sorghum	endoplasmic reticulum	75.8	76.34
Os01t0814900-01	Rice	plasma membrane	74.38	74.91
Zm00001d038529_P003	Maize	plasma membrane	77.58	70.55
Zm00001d043098_P002	Maize	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	75.09	68.95
HORVU3Hr1G079960.7	Barley	endoplasmic reticulum	51.96	66.06
Zm00001d017490_P001	Maize	mitochondrion	20.64	56.31
Bra015656.1-P	Field mustard	cytosol	35.59	11.24
Bra003670.1-P	Field mustard	plastid	35.59	10.99
Bra008333.1-P	Field mustard	plastid	34.52	10.71

Protein Annotations

Gene3D:2.40.30.10	Gene3D:3.40.50.80	MapMan:50.1.6	EnsemblPlantsGene:Bra002104	EnsemblPlants:Bra002104.1	EnsemblPlants:Bra002104.1-P
InterPro:Fd_Rdtase_FAD-bd	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	GO:GO:0003674	GO:GO:0003824	GO:GO:0004128	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0055114
InterPro:IPR017927	UniProt:M4CD23	InterPro:NADH-Cyt_B5_reductase	InterPro:OxRdtase_FAD-bd_dom	InterPro:OxRdtase_FAD/NAD-bd	PFAM:PF00175
PFAM:PF00970	PRINTS:PR00371	PRINTS:PR00406	PFscan:PS51384	PANTHER:PTHR19370	PANTHER:PTHR19370:SF175
InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI0002543B44	SEG:seg

Description

AT5G17770 (E=2e-145) ATCBR, CBR1 | ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1); cytochrome-b5 reductase

Coordinates

chrA10:+:11423432..11425224

Molecular Weight (calculated)

31238.8 Da

IEP (calculated)

7.981

GRAVY (calculated)

-0.211

Length

281 amino acids

Sequence
(BLAST)

001: MDTEFLRTLD RQILLGVFVA FVAVGAGAAY YLSSSKKRRG CLDPENFKEF KLVTKEQLSH NVAKFVFELP TSTSALGLPI GQHISCRGKD AQGEDVIKPY
101: TPTTLDSDLG RFELVIKMYP QGRMSHHFRE LRVGDHLAVK GPKGRFKYQP GQFRAFGMLA GGSGITPMFQ VARAILENPA DKTKVHLIYA NVTSEDILLK
201: EELESLTANY PDQFKVYYVL NQPPETWDGG VGFVSKEMIQ AHCPAPASDI QILRCGPPPM NKAMAANLEA LGYSPEMQFQ F

Best Arabidopsis Sequence Match ( AT5G17770.1 )
(BLAST)

001: MDTEFLRTLD RQILLGVFVA FVAVGAGAAY FLTSSKKRRV CLDPENFKEF KLVKRHQLSH NVAKFVFELP TSTSVLGLPI GQHISCRGKD GQGEDVIKPY
101: TPTTLDSDVG RFELVIKMYP QGRMSHHFRE MRVGDHLAVK GPKGRFKYQP GQFRAFGMLA GGSGITPMFQ VARAILENPT DKTKVHLIYA NVTYDDILLK
201: EELEGLTTNY PEQFKIFYVL NQPPEVWDGG VGFVSKEMIQ THCPAPASDI QILRCGPPPM NKAMAANLEA LGYSPEMQFQ F

Arabidopsis Description

CBR1NADH-cytochrome b5 reductase [Source:UniProtKB/TrEMBL;Acc:A0A178US77]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,mitochondrion,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.