Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- peroxisome 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G080010.1 | Barley | cytosol, peroxisome | 61.16 | 77.78 |
| Zm00001d043098_P002 | Maize | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 98.06 | 33.01 |
| EES03792 | Sorghum | endoplasmic reticulum | 72.82 | 26.88 |
| KRG94933 | Soybean | mitochondrion | 58.25 | 24.9 |
| Os01t0814900-01 | Rice | plasma membrane | 65.05 | 24.01 |
| TraesCS3D01G332300.1 | Wheat | unclear | 61.16 | 22.58 |
| TraesCS3B01G370400.1 | Wheat | endoplasmic reticulum | 61.16 | 22.58 |
| TraesCS3A01G338700.1 | Wheat | golgi | 61.16 | 22.58 |
| Bra023636.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 54.37 | 22.31 |
| GSMUA_Achr8P21540_001 | Banana | endoplasmic reticulum | 58.25 | 21.66 |
| KRH64963 | Soybean | endoplasmic reticulum | 58.25 | 21.58 |
| Zm00001d038529_P003 | Maize | plasma membrane | 64.08 | 21.36 |
| CDY38457 | Canola | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 58.25 | 21.35 |
| Solyc10g081440.1.1 | Tomato | extracellular, plastid | 57.28 | 21.22 |
| PGSC0003DMT400072515 | Potato | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 57.28 | 21.22 |
| Bra002104.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 56.31 | 20.64 |
| AT5G17770.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole | 56.31 | 20.64 |
| VIT_08s0056g01150.t01 | Wine grape | endoplasmic reticulum | 55.34 | 20.58 |
| CDY59316 | Canola | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 55.34 | 20.28 |
| CDY02688 | Canola | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 55.34 | 20.28 |
| CDX78759 | Canola | endoplasmic reticulum | 55.34 | 20.28 |
| Bra006419.1-P | Field mustard | endoplasmic reticulum | 55.34 | 20.21 |
| CDY63711 | Canola | cytosol | 41.75 | 19.46 |
| CDY28560 | Canola | endoplasmic reticulum | 34.95 | 18.85 |
| CDX70774 | Canola | endoplasmic reticulum | 39.81 | 15.07 |
| Zm00001d039656_P003 | Maize | mitochondrion | 34.95 | 11.58 |
| CDY16891 | Canola | golgi, plasma membrane, vacuole | 58.25 | 7.55 |
| Zm00001d049995_P001 | Maize | cytosol, mitochondrion, peroxisome, plastid | 26.21 | 4.0 |
| Zm00001d031769_P001 | Maize | mitochondrion | 26.21 | 3.92 |
| Zm00001d052139_P001 | Maize | cytosol, mitochondrion, peroxisome | 22.33 | 3.55 |
| Zm00001d018206_P001 | Maize | peroxisome | 22.33 | 3.48 |
| Zm00001d017025_P001 | Maize | cytosol | 22.33 | 2.58 |
Protein Annotations
| EnsemblPlants:Zm00001d017490_P001 | EnsemblPlants:Zm00001d017490_T001 | EnsemblPlantsGene:Zm00001d017490 | Gene3D:3.40.50.80 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:OxRdtase_FAD/NAD-bd | PANTHER:PTHR19370 |
| PANTHER:PTHR19370:SF175 | PFAM:PF00175 | ProteinID:AQK73257.1 | SUPFAM:SSF52343 | UniParc:UPI000843BB6E | UniProt:A0A1D6HF37 |
| MapMan:35.1 | : | : | : | : | : |
Description
NADH--cytochrome b5 reductase 1
Coordinates
chr5:+:197380347..197381416
Molecular Weight (calculated)
12015.7 Da
IEP (calculated)
8.332
GRAVY (calculated)
-0.193
Length
103 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKTYPGRFK IYYVLNQVCV TFFRKFEAHC FQRHLTYTVF LLVHPPENWN GGVGFVSKEM IQSHCPAPAE DIQILRCGPP PMNKAMAAHL DELNYTKEMQ
101: FQF
101: FQF
001: MDTEFLRTLD RQILLGVFVA FVAVGAGAAY FLTSSKKRRV CLDPENFKEF KLVKRHQLSH NVAKFVFELP TSTSVLGLPI GQHISCRGKD GQGEDVIKPY
101: TPTTLDSDVG RFELVIKMYP QGRMSHHFRE MRVGDHLAVK GPKGRFKYQP GQFRAFGMLA GGSGITPMFQ VARAILENPT DKTKVHLIYA NVTYDDILLK
201: EELEGLTTNY PEQFKIFYVL NQPPEVWDGG VGFVSKEMIQ THCPAPASDI QILRCGPPPM NKAMAANLEA LGYSPEMQFQ F
101: TPTTLDSDVG RFELVIKMYP QGRMSHHFRE MRVGDHLAVK GPKGRFKYQP GQFRAFGMLA GGSGITPMFQ VARAILENPT DKTKVHLIYA NVTYDDILLK
201: EELEGLTTNY PEQFKIFYVL NQPPEVWDGG VGFVSKEMIQ THCPAPASDI QILRCGPPPM NKAMAANLEA LGYSPEMQFQ F
Arabidopsis Description
CBR1NADH-cytochrome b5 reductase [Source:UniProtKB/TrEMBL;Acc:A0A178US77]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,mitochondrion,cytosol,plasma membrane,golgi]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,mitochondrion,cytosol,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.