Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG94933 | Soybean | mitochondrion | 76.47 | 70.12 |
| CDY59316 | Canola | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 84.16 | 66.19 |
| CDY38457 | Canola | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 84.16 | 66.19 |
| CDY02688 | Canola | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 84.16 | 66.19 |
| CDX70774 | Canola | endoplasmic reticulum | 81.45 | 66.18 |
| AT5G17770.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole | 81.45 | 64.06 |
| CDX78759 | Canola | endoplasmic reticulum | 81.45 | 64.06 |
| KRH64963 | Soybean | endoplasmic reticulum | 75.57 | 60.07 |
| GSMUA_Achr8P21540_001 | Banana | endoplasmic reticulum | 74.66 | 59.57 |
| PGSC0003DMT400072515 | Potato | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 74.66 | 59.35 |
| VIT_08s0056g01150.t01 | Wine grape | endoplasmic reticulum | 73.76 | 58.84 |
| EES18413 | Sorghum | plastid | 74.21 | 58.78 |
| Solyc10g081440.1.1 | Tomato | extracellular, plastid | 73.76 | 58.63 |
| TraesCS1B01G316400.1 | Wheat | unclear | 73.76 | 58.42 |
| TraesCS3D01G332300.1 | Wheat | unclear | 73.3 | 58.06 |
| TraesCS3A01G338700.1 | Wheat | golgi | 73.3 | 58.06 |
| Os05t0488900-01 | Rice | endoplasmic reticulum | 73.76 | 57.8 |
| TraesCS3B01G370400.1 | Wheat | endoplasmic reticulum | 72.85 | 57.71 |
| TraesCS1A01G305700.1 | Wheat | golgi | 72.85 | 57.71 |
| TraesCS1D01G305400.1 | Wheat | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 72.85 | 57.71 |
| EES03792 | Sorghum | endoplasmic reticulum | 71.95 | 56.99 |
| Os01t0814900-01 | Rice | plasma membrane | 71.04 | 56.27 |
| HORVU3Hr1G079960.7 | Barley | endoplasmic reticulum | 52.94 | 52.94 |
| Zm00001d038529_P003 | Maize | plasma membrane | 73.76 | 52.75 |
| Zm00001d043098_P002 | Maize | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 71.04 | 51.31 |
| Zm00001d017490_P001 | Maize | mitochondrion | 19.46 | 41.75 |
| CDY28560 | Canola | endoplasmic reticulum | 28.96 | 33.51 |
| CDX87505 | Canola | cytosol, mitochondrion, peroxisome, plastid | 37.56 | 29.75 |
| CDY16891 | Canola | golgi, plasma membrane, vacuole | 85.07 | 23.65 |
| CDY26836 | Canola | cytosol | 35.29 | 14.0 |
| CDY68886 | Canola | cytosol, mitochondrion | 35.29 | 10.73 |
| CDX88386 | Canola | cytosol, plastid | 37.56 | 9.28 |
| CDX68044 | Canola | plastid | 35.75 | 8.68 |
| CDX79234 | Canola | plastid | 35.29 | 8.56 |
| CDX87504 | Canola | cytosol | 3.62 | 1.55 |
Protein Annotations
| Gene3D:2.40.30.10 | Gene3D:3.40.50.80 | MapMan:35.1 | GO:A0A078J967 | UniProt:A0A078J967 | EnsemblPlants:CDY63711 |
| ProteinID:CDY63711 | ProteinID:CDY63711.1 | InterPro:Fd_Rdtase_FAD-bd | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00039565001 | InterPro:IPR017927 | InterPro:NADH-Cyt_B5_reductase |
| InterPro:OxRdtase_FAD-bd_dom | InterPro:OxRdtase_FAD/NAD-bd | PFAM:PF00175 | PFAM:PF00970 | PRINTS:PR00406 | PFscan:PS51384 |
| PANTHER:PTHR19370 | PANTHER:PTHR19370:SF175 | InterPro:Riboflavin_synthase-like_b-brl | SUPFAM:SSF52343 | SUPFAM:SSF63380 | UniParc:UPI0004EE4E8F |
Description
BnaCnng42480DBnaCnng42480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J967]
Coordinates
chrLK034341:-:3023..4554
Molecular Weight (calculated)
24924.9 Da
IEP (calculated)
6.243
GRAVY (calculated)
-0.386
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPDNFKDFK LVKKQQLSHN VAKFVFEFPT TTSVLGLPIG QHISSLDAQG EDVIKPYTPT TLDSDLGRFE LVIKMYPQGR ISHHFDHLAV KGPKVLTLLT
101: QMFKYQPGQF RAFGMLAGGS GITPQVPSSK GDPRKPKDKT EVHLIYANVT YEDILLREEL ESLTANYPDQ FKIYYVLNQP PETWDGASDI QILRCGPPPM
201: NKAMAANLED LGYSPEMQFQ F
101: QMFKYQPGQF RAFGMLAGGS GITPQVPSSK GDPRKPKDKT EVHLIYANVT YEDILLREEL ESLTANYPDQ FKIYYVLNQP PETWDGASDI QILRCGPPPM
201: NKAMAANLED LGYSPEMQFQ F
001: MDTEFLRTLD RQILLGVFVA FVAVGAGAAY FLTSSKKRRV CLDPENFKEF KLVKRHQLSH NVAKFVFELP TSTSVLGLPI GQHISCRGKD GQGEDVIKPY
101: TPTTLDSDVG RFELVIKMYP QGRMSHHFRE MRVGDHLAVK GPKGRFKYQP GQFRAFGMLA GGSGITPMFQ VARAILENPT DKTKVHLIYA NVTYDDILLK
201: EELEGLTTNY PEQFKIFYVL NQPPEVWDGG VGFVSKEMIQ THCPAPASDI QILRCGPPPM NKAMAANLEA LGYSPEMQFQ F
101: TPTTLDSDVG RFELVIKMYP QGRMSHHFRE MRVGDHLAVK GPKGRFKYQP GQFRAFGMLA GGSGITPMFQ VARAILENPT DKTKVHLIYA NVTYDDILLK
201: EELEGLTTNY PEQFKIFYVL NQPPEVWDGG VGFVSKEMIQ THCPAPASDI QILRCGPPPM NKAMAANLEA LGYSPEMQFQ F
Arabidopsis Description
CBR1NADH-cytochrome b5 reductase [Source:UniProtKB/TrEMBL;Acc:A0A178US77]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,mitochondrion,cytosol,plasma membrane,golgi]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,mitochondrion,cytosol,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.