Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- vacuole 3
- extracellular 2
- endoplasmic reticulum 2
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY38457 | Canola | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 34.72 | 98.22 |
| CDY59316 | Canola | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 33.58 | 95.02 |
| CDY02688 | Canola | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 33.58 | 95.02 |
| AT5G17770.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole | 33.08 | 93.59 |
| CDX78759 | Canola | endoplasmic reticulum | 32.58 | 92.17 |
| CDX70774 | Canola | endoplasmic reticulum | 31.2 | 91.18 |
| KRG94933 | Soybean | mitochondrion | 26.67 | 87.97 |
| CDY63711 | Canola | cytosol | 23.65 | 85.07 |
| KRH64963 | Soybean | endoplasmic reticulum | 29.18 | 83.45 |
| PGSC0003DMT400072515 | Potato | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 29.06 | 83.09 |
| Solyc10g081440.1.1 | Tomato | extracellular, plastid | 28.8 | 82.37 |
| VIT_08s0056g01150.t01 | Wine grape | endoplasmic reticulum | 28.05 | 80.51 |
| Os05t0488900-01 | Rice | endoplasmic reticulum | 28.18 | 79.43 |
| TraesCS1B01G316400.1 | Wheat | unclear | 27.8 | 79.21 |
| EES18413 | Sorghum | plastid | 27.67 | 78.85 |
| GSMUA_Achr8P21540_001 | Banana | endoplasmic reticulum | 27.42 | 78.7 |
| TraesCS1D01G305400.1 | Wheat | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 27.55 | 78.49 |
| TraesCS1A01G305700.1 | Wheat | golgi | 27.55 | 78.49 |
| EES03792 | Sorghum | endoplasmic reticulum | 27.3 | 77.78 |
| TraesCS3A01G338700.1 | Wheat | golgi | 27.3 | 77.78 |
| TraesCS3B01G370400.1 | Wheat | endoplasmic reticulum | 27.3 | 77.78 |
| TraesCS3D01G332300.1 | Wheat | unclear | 27.3 | 77.78 |
| Os01t0814900-01 | Rice | plasma membrane | 26.42 | 75.27 |
| Zm00001d038529_P003 | Maize | plasma membrane | 27.8 | 71.52 |
| Zm00001d043098_P002 | Maize | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 27.04 | 70.26 |
| HORVU3Hr1G079960.7 | Barley | endoplasmic reticulum | 19.12 | 68.78 |
| Zm00001d017490_P001 | Maize | mitochondrion | 7.55 | 58.25 |
| CDY28560 | Canola | endoplasmic reticulum | 10.82 | 45.03 |
| CDX87505 | Canola | cytosol, mitochondrion, peroxisome, plastid | 11.82 | 33.69 |
| CDY26836 | Canola | cytosol | 11.32 | 16.16 |
| CDX88386 | Canola | cytosol, plastid | 16.48 | 14.65 |
| CDX68044 | Canola | plastid | 16.35 | 14.29 |
| CDX79234 | Canola | plastid | 16.23 | 14.16 |
| CDY68886 | Canola | cytosol, mitochondrion | 11.95 | 13.07 |
| CDX87504 | Canola | cytosol | 5.53 | 8.51 |
Protein Annotations
| Gene3D:2.40.30.10 | MapMan:21.9.5.1 | Gene3D:3.40.50.1820 | Gene3D:3.40.50.80 | GO:A0A078FV94 | UniProt:A0A078FV94 |
| InterPro:AB_hydrolase | InterPro:AB_hydrolase_1 | EnsemblPlants:CDY16891 | ProteinID:CDY16891 | ProteinID:CDY16891.1 | InterPro:Fd_Rdtase_FAD-bd |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016491 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00094792001 | InterPro:IPR017927 | InterPro:IPR029058 |
| InterPro:NADH-Cyt_B5_reductase | InterPro:OxRdtase_FAD-bd_dom | InterPro:OxRdtase_FAD/NAD-bd | PFAM:PF00175 | PFAM:PF00561 | PFAM:PF00970 |
| PRINTS:PR00406 | PFscan:PS51384 | PANTHER:PTHR19370 | PANTHER:PTHR19370:SF175 | InterPro:Riboflavin_synthase-like_b-brl | SUPFAM:SSF52343 |
| SUPFAM:SSF53474 | SUPFAM:SSF63380 | TMHMM:TMhelix | UniParc:UPI0004EEC593 | SEG:seg | : |
Description
BnaC09g40180DBnaC09g40180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FV94]
Coordinates
chrLK032068:+:121894..126154
Molecular Weight (calculated)
89574.2 Da
IEP (calculated)
8.689
GRAVY (calculated)
-0.185
Length
795 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFLAISTKK WARQSGTAIH AALSLLVFFF LDLTDAILCV VYVLLDEILE GKSQSCYCNA SPHTTGENEV SETLFKRRNV FREMGFLGFA RRFKLSGRMV
101: KSEKAHRWSD CGCQSCNSWT KNEDGNLHVV VKDSTPQEDS VQEPSENVIF IHGFMGSSYF WTETVFEHVK EDRYRLFAVD LLGFGESPKP RDSLYTLRDH
201: VERIEKSVIE PYQLGSFHVV AHSMGCLIAL ALAAKHSTIV KSVTLVAPPY FPSSLEESVL TRIAGKRLWP PLAFGTAVMS WYEHVGRCVC FIVCKHHKIW
301: ESLIKLCTGK REIPWKIKDI TRHTHHSAWH CMHNVICGGS KFADKHLETL VNSGVKIHLM QGDRDEMVPL HCSGDMKRSF PAVEVEIVVG ADHESVIGGR
401: REEFDGYQTG NMRKVIRARS KQSINRSLLE RISAHNVDAS FPNFITSSHN KPLLVDQVTR LRHRIHCLVY QLPSLRFNGG DNKLKRLLAK RTDLAPSLFF
501: PHSLSFFLSF LAMDTEFLQN LDRQILLGVF VAFVAVGAGA GAAYYLSSSK KRRGCLDPEN FKEFKLVKKQ QLSHNVAKFV FELPTSSSVL GLPIGQHISC
601: RGKDAQGEDV IKPYTPTTLD SDLGRFELVI KMYPQGRMSH HFREMRVGDH LAVKGPKGRF KYQPGQFRAF GMLAGGSGIT PMFQVARAIL ENPTDKTKVH
701: LIYANVTSED ILLKEELESL TANYPDQFKI YYVLNQPPET WDGGVGFVSK EMIQSHCPAP ASDIQILRCG PPPMNKAMAA NLEALGYSPE MQFQF
101: KSEKAHRWSD CGCQSCNSWT KNEDGNLHVV VKDSTPQEDS VQEPSENVIF IHGFMGSSYF WTETVFEHVK EDRYRLFAVD LLGFGESPKP RDSLYTLRDH
201: VERIEKSVIE PYQLGSFHVV AHSMGCLIAL ALAAKHSTIV KSVTLVAPPY FPSSLEESVL TRIAGKRLWP PLAFGTAVMS WYEHVGRCVC FIVCKHHKIW
301: ESLIKLCTGK REIPWKIKDI TRHTHHSAWH CMHNVICGGS KFADKHLETL VNSGVKIHLM QGDRDEMVPL HCSGDMKRSF PAVEVEIVVG ADHESVIGGR
401: REEFDGYQTG NMRKVIRARS KQSINRSLLE RISAHNVDAS FPNFITSSHN KPLLVDQVTR LRHRIHCLVY QLPSLRFNGG DNKLKRLLAK RTDLAPSLFF
501: PHSLSFFLSF LAMDTEFLQN LDRQILLGVF VAFVAVGAGA GAAYYLSSSK KRRGCLDPEN FKEFKLVKKQ QLSHNVAKFV FELPTSSSVL GLPIGQHISC
601: RGKDAQGEDV IKPYTPTTLD SDLGRFELVI KMYPQGRMSH HFREMRVGDH LAVKGPKGRF KYQPGQFRAF GMLAGGSGIT PMFQVARAIL ENPTDKTKVH
701: LIYANVTSED ILLKEELESL TANYPDQFKI YYVLNQPPET WDGGVGFVSK EMIQSHCPAP ASDIQILRCG PPPMNKAMAA NLEALGYSPE MQFQF
001: MSFPRKFGTA IHAALSFIVF FFLDLLDAIL CVVYEFVDEI LEENSTGCYC TAAAPQSQTT DENELSSETL FGRRNIFRGM WFLGFAREFK SKLSRKLRKS
101: KIHQESVNRW SDCGCKSCKS WTKNEDGNLH VVVKDSTSRE YSVQEPSENV IFIHGFMGSS HFWTETVFEH IQKDDYRLLA IDLLGFGESP KPRDSLYTLK
201: DHVDTIERSV IKPYQLDSFH VVAHSMGCLI ALALAAKHSN IVKSVTLVAP PYFPSSVEGS VLNRIARKRL WPPLAFGTAV MSWYEHIGRC VCFIICKHHK
301: IWEWLIKLCI GKREIHWKIK DITRHTHHSA WHSMHNVICG GSKVADEHLE TLIKSGVKIH LMQGDCDQIV PSHCSGNMKR TFPAVEVDII TGADHDSMIS
401: GRGEEFAEKL ESIWCSC
101: KIHQESVNRW SDCGCKSCKS WTKNEDGNLH VVVKDSTSRE YSVQEPSENV IFIHGFMGSS HFWTETVFEH IQKDDYRLLA IDLLGFGESP KPRDSLYTLK
201: DHVDTIERSV IKPYQLDSFH VVAHSMGCLI ALALAAKHSN IVKSVTLVAP PYFPSSVEGS VLNRIARKRL WPPLAFGTAV MSWYEHIGRC VCFIICKHHK
301: IWEWLIKLCI GKREIHWKIK DITRHTHHSA WHSMHNVICG GSKVADEHLE TLIKSGVKIH LMQGDCDQIV PSHCSGNMKR TFPAVEVDII TGADHDSMIS
401: GRGEEFAEKL ESIWCSC
Arabidopsis Description
alpha/beta-Hydrolases superfamily protein [Source:TAIR;Acc:AT5G17780]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.