Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 7
- vacuole 6
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d017490_P001 | Maize | mitochondrion | 18.85 | 34.95 |
| CDY02688 | Canola | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 47.12 | 32.03 |
| CDY59316 | Canola | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 46.6 | 31.67 |
| CDY38457 | Canola | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 43.98 | 29.89 |
| CDX78759 | Canola | endoplasmic reticulum | 43.46 | 29.54 |
| CDY63711 | Canola | cytosol | 33.51 | 28.96 |
| GSMUA_Achr8P21540_001 | Banana | endoplasmic reticulum | 40.84 | 28.16 |
| TraesCS1D01G305400.1 | Wheat | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 40.84 | 27.96 |
| TraesCS1B01G316400.1 | Wheat | unclear | 40.84 | 27.96 |
| VIT_08s0056g01150.t01 | Wine grape | endoplasmic reticulum | 40.31 | 27.8 |
| PGSC0003DMT400072515 | Potato | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 40.31 | 27.7 |
| Solyc10g081440.1.1 | Tomato | extracellular, plastid | 40.31 | 27.7 |
| TraesCS1A01G305700.1 | Wheat | golgi | 40.31 | 27.6 |
| EES18413 | Sorghum | plastid | 40.31 | 27.6 |
| EES03792 | Sorghum | endoplasmic reticulum | 38.74 | 26.52 |
| Os05t0488900-01 | Rice | endoplasmic reticulum | 38.74 | 26.24 |
| TraesCS3A01G338700.1 | Wheat | golgi | 37.7 | 25.81 |
| TraesCS3B01G370400.1 | Wheat | endoplasmic reticulum | 37.7 | 25.81 |
| Os01t0814900-01 | Rice | plasma membrane | 37.7 | 25.81 |
| TraesCS3D01G332300.1 | Wheat | unclear | 37.7 | 25.81 |
| CDX70774 | Canola | endoplasmic reticulum | 36.13 | 25.37 |
| Zm00001d038529_P003 | Maize | plasma membrane | 40.31 | 24.92 |
| Zm00001d043098_P002 | Maize | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 38.22 | 23.86 |
| HORVU3Hr1G079960.7 | Barley | endoplasmic reticulum | 20.94 | 18.1 |
| CDX87505 | Canola | cytosol, mitochondrion, peroxisome, plastid | 20.94 | 14.34 |
| CDY16891 | Canola | golgi, plasma membrane, vacuole | 45.03 | 10.82 |
| CDY26836 | Canola | cytosol | 19.37 | 6.64 |
| CDY68886 | Canola | cytosol, mitochondrion | 20.42 | 5.36 |
| CDX88386 | Canola | cytosol, plastid | 24.08 | 5.15 |
| CDX68044 | Canola | plastid | 23.04 | 4.84 |
| CDX79234 | Canola | plastid | 23.04 | 4.83 |
| CDX87504 | Canola | cytosol | 6.28 | 2.32 |
Protein Annotations
| EnsemblPlants:CDY28560 | EnsemblPlantsGene:GSBRNA2T00040507001 | Gene3D:3.40.50.80 | GO:A0A078GPV9 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:OxRdtase_FAD/NAD-bd | PANTHER:PTHR19370 |
| PANTHER:PTHR19370:SF175 | PFAM:PF00175 | ProteinID:CDY28560 | ProteinID:CDY28560.1 | SignalP:SignalP-noTM | SUPFAM:SSF52343 |
| UniParc:UPI0004EE8CC8 | UniProt:A0A078GPV9 | MapMan:35.1 | : | : | : |
Description
BnaC02g19290DBnaC02g19290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GPV9]
Coordinates
chrLK032222:+:219789..220771
Molecular Weight (calculated)
21934.7 Da
IEP (calculated)
8.463
GRAVY (calculated)
0.029
Length
191 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLGFSLFLV KLSSIMPLIQ VQELSRMMLQ HILCFSFFGP WDPSQGLYNP GKIARHHNPE MKRLSFGFFF PGCHSSISDT AQASVSKLRD ARYRARAILE
101: NPTDKTKVLL IYANVTYNDI LLRNWSLTAN YPDQFKIYYV LNQPPETWDG GVGFVSKDMI QAHCPAPASD IQVIPYPLFF LILNIPDHHF F
101: NPTDKTKVLL IYANVTYNDI LLRNWSLTAN YPDQFKIYYV LNQPPETWDG GVGFVSKDMI QAHCPAPASD IQVIPYPLFF LILNIPDHHF F
0001: MWTNVFRIGG LHNVSWFQFL PSETELNPGF DRSSRAEQNE VATYLVLSSH LRLQKEGFLT TWTNSFVGPW DPSQGLYNPD EKIKLWLFLP GRHSSISDKA
0101: QAAVSKLRVV ASGIWVAPGD SEEISVAFSQ SLRNCIERAL SGISYMRFGD VFSKFSPQSE EYLRRGQPTV EFIFAATEEA VFVHVIISAK NVRTLSSGDA
0201: ERMLRSSLKN SSYRLPVIVS PHGMRGSLTG FCPNDLVKQV YFSSGNLKTS TGYVGLPSHI GRGSRLINGN HCYVEVTLGC CQNRNDNTSQ ANSTFAVNLP
0301: HNQCPEPSVG SKDHRKGQSD LSSVCEKKFI YPAEAVLVPI LQSAFAKFSL KRFWLQNWIG PSLAGSSLFM HWAGDFDCLG ASENKSDGFY EKNGYNSSGS
0401: SRNSSISSTS SASSGSGWRM TSRTGDLDAD ADSLTCRQSG LTCNDDRLKM GSKRPRTGMA ESFGQVGIEN DQIGWDWDAD DDDDDREVGM DIKALLSEFG
0501: DFGDFFENDA LPFGEPPGTA ESHVLVFPPD SADVGSSPVD MMDVSDQIVL PVGFSSFESF NPVPPIIDEC LIKSQEVLHS SITSVPSNQM SISSTGEFDH
0601: LLKAEAMMTF APEYGAVEAP MSEISSTFFK SPYLPKSHKV ESSNSRTSNY VYGATPPTTD SDGAGDMILF GSKSCIGNNA GRTLYHSREH YTQVEGRKGR
0701: HDKLPTVISD NSSTKEGVSQ SIHSKHSAAN AVKVVQGKKT DGISAVVSTL LSSKTLLATD VGSVMFQAFM CRMRHIITSS KHSSPVSLTR LSGNFFLNQL
0801: SNEPSTLTDN ISARNEIYKK DIPTRIAGDF DGGMLDSHMS APVGVWRTVS VPKTAKPASS PNIEAGSSLP HSSFSEDSLL SYGQRQPLQD LLDGIALLVQ
0901: QATSFVDLAL DSDCGDGPYG WLALEELWRR ELSCGPSAGH AGCGGTLASC HSLDIAGVKL VDPLSAEVFP SSVITLLQSD IKTALKSAFG QSDGPLSVTD
1001: WCKGRNQSGD GGSISEGFTA ESALSEVSNA IDGGKGDETA QSQDIYSSEL LRPTLFVLPS PAILVGYQDD WLKISTNSLT HWEKAPFEPY ALPKSINYAV
1101: VCPDIDPLTC AATDFFQQLG TVYETCRLGT HLPQSLGNQM EKDVGRLSSS GFVLLDCPQS MKIESNNTSL LGSLSDYFLS LSNGWNVNSY LKSLSKALKG
1201: LKLGSGLYTN QKEGSGSPCV VVYIVCPFPD PSAVLRTIVE SSIALGSVIQ SDRDRRSILN SQVARAFSSS TAVDEASISH IPVLSGFSVP KLVLQVVSVD
1301: SIFRITSPSF NELVILKDTA FSVYNKARRI SRGMPNDAFF SSSLPSRSSS ALTPMNSISG IWKDCGGSRM TGSTHPRDGE IDVSLRTSGW DTSTSWQIPR
1401: SGGLSCDPNR NGDFYLNDEI FYLFEPLFIL SEPGSVERGV SPTFTSLGSE SSKPIPEDGG RGSGPGMNSM EGITSGSSSQ GDVSQLEGKA IPSLHCCYGW
1501: TEDWRWLVSI WTDARGELLD THIFPFGGIS SRQDTKGLQC LFVQVLQQGC QILQACSSPD NGSFKPRDFV ITRIGNFFEL EYQEWQKAIY SAGGPEIKKW
1601: PIQLRRSAPS GIATNSNGSS LQQQDLSLIQ ERASSTSTLY SSHSKQSTFV KGSMGQSAGR KQIMGGQTIS GTPRGLFQWV HSISFASISL DHSLHFVLPA
1701: ELVSAGGGQS STGMSSVNYI EGFTPVKSLG STAFSYMMIP SPNMRFLHPS PLQLPTCLTA ESPPLAHLLH SKGYAIPLST GFVVSKAVPS MRKDSRINVK
1801: EEWPSVLSVS LIDYYGGYDN AHDKILQGIV KQGGGTKETR DFEVESHLIL ESIAAELHAL SWMTVSPAYL DRRTALPFHC DMVLRLRRLL HFADKEVSRI
1901: PDKTGLKVLT TDSGSQSLSM SLPRDHLDGI CFQHTDCNFL RCCSPFLSGH IRRDGEQVNG QIKTAAIYYG VSLFPGKIDN LNAMVWSHSC CRPLSSMHHM
2001: A
0101: QAAVSKLRVV ASGIWVAPGD SEEISVAFSQ SLRNCIERAL SGISYMRFGD VFSKFSPQSE EYLRRGQPTV EFIFAATEEA VFVHVIISAK NVRTLSSGDA
0201: ERMLRSSLKN SSYRLPVIVS PHGMRGSLTG FCPNDLVKQV YFSSGNLKTS TGYVGLPSHI GRGSRLINGN HCYVEVTLGC CQNRNDNTSQ ANSTFAVNLP
0301: HNQCPEPSVG SKDHRKGQSD LSSVCEKKFI YPAEAVLVPI LQSAFAKFSL KRFWLQNWIG PSLAGSSLFM HWAGDFDCLG ASENKSDGFY EKNGYNSSGS
0401: SRNSSISSTS SASSGSGWRM TSRTGDLDAD ADSLTCRQSG LTCNDDRLKM GSKRPRTGMA ESFGQVGIEN DQIGWDWDAD DDDDDREVGM DIKALLSEFG
0501: DFGDFFENDA LPFGEPPGTA ESHVLVFPPD SADVGSSPVD MMDVSDQIVL PVGFSSFESF NPVPPIIDEC LIKSQEVLHS SITSVPSNQM SISSTGEFDH
0601: LLKAEAMMTF APEYGAVEAP MSEISSTFFK SPYLPKSHKV ESSNSRTSNY VYGATPPTTD SDGAGDMILF GSKSCIGNNA GRTLYHSREH YTQVEGRKGR
0701: HDKLPTVISD NSSTKEGVSQ SIHSKHSAAN AVKVVQGKKT DGISAVVSTL LSSKTLLATD VGSVMFQAFM CRMRHIITSS KHSSPVSLTR LSGNFFLNQL
0801: SNEPSTLTDN ISARNEIYKK DIPTRIAGDF DGGMLDSHMS APVGVWRTVS VPKTAKPASS PNIEAGSSLP HSSFSEDSLL SYGQRQPLQD LLDGIALLVQ
0901: QATSFVDLAL DSDCGDGPYG WLALEELWRR ELSCGPSAGH AGCGGTLASC HSLDIAGVKL VDPLSAEVFP SSVITLLQSD IKTALKSAFG QSDGPLSVTD
1001: WCKGRNQSGD GGSISEGFTA ESALSEVSNA IDGGKGDETA QSQDIYSSEL LRPTLFVLPS PAILVGYQDD WLKISTNSLT HWEKAPFEPY ALPKSINYAV
1101: VCPDIDPLTC AATDFFQQLG TVYETCRLGT HLPQSLGNQM EKDVGRLSSS GFVLLDCPQS MKIESNNTSL LGSLSDYFLS LSNGWNVNSY LKSLSKALKG
1201: LKLGSGLYTN QKEGSGSPCV VVYIVCPFPD PSAVLRTIVE SSIALGSVIQ SDRDRRSILN SQVARAFSSS TAVDEASISH IPVLSGFSVP KLVLQVVSVD
1301: SIFRITSPSF NELVILKDTA FSVYNKARRI SRGMPNDAFF SSSLPSRSSS ALTPMNSISG IWKDCGGSRM TGSTHPRDGE IDVSLRTSGW DTSTSWQIPR
1401: SGGLSCDPNR NGDFYLNDEI FYLFEPLFIL SEPGSVERGV SPTFTSLGSE SSKPIPEDGG RGSGPGMNSM EGITSGSSSQ GDVSQLEGKA IPSLHCCYGW
1501: TEDWRWLVSI WTDARGELLD THIFPFGGIS SRQDTKGLQC LFVQVLQQGC QILQACSSPD NGSFKPRDFV ITRIGNFFEL EYQEWQKAIY SAGGPEIKKW
1601: PIQLRRSAPS GIATNSNGSS LQQQDLSLIQ ERASSTSTLY SSHSKQSTFV KGSMGQSAGR KQIMGGQTIS GTPRGLFQWV HSISFASISL DHSLHFVLPA
1701: ELVSAGGGQS STGMSSVNYI EGFTPVKSLG STAFSYMMIP SPNMRFLHPS PLQLPTCLTA ESPPLAHLLH SKGYAIPLST GFVVSKAVPS MRKDSRINVK
1801: EEWPSVLSVS LIDYYGGYDN AHDKILQGIV KQGGGTKETR DFEVESHLIL ESIAAELHAL SWMTVSPAYL DRRTALPFHC DMVLRLRRLL HFADKEVSRI
1901: PDKTGLKVLT TDSGSQSLSM SLPRDHLDGI CFQHTDCNFL RCCSPFLSGH IRRDGEQVNG QIKTAAIYYG VSLFPGKIDN LNAMVWSHSC CRPLSSMHHM
2001: A
Arabidopsis Description
GCTRNA polymerase II transcription mediators [Source:TAIR;Acc:AT1G55325]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.