CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid, cytosol

Predictor Summary:

plastid 2
mitochondrion 3
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDY36901
CDY44976
CDY58069
CDY58070
CDY70805

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G77760.1	CDY36901	AT3G48150.1	21798944
AT1G77760.1	CDY44976	AT3G48150.1	21798944
AT1G77760.1	CDY58069	AT3G48150.1	21798944
AT1G77760.1	CDY58070	AT3G48150.1	21798944
AT1G77760.1	CDY70805	AT3G48150.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26836	Canola	cytosol	87.81	43.99
CDY63711	Canola	cytosol	29.75	37.56
CDY68886	Canola	cytosol, mitochondrion	91.04	34.94
CDY59316	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	34.77	34.52
CDY02688	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	34.77	34.52
CDX78759	Canola	endoplasmic reticulum	34.05	33.81
CDY38457	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	33.69	33.45
CDX70774	Canola	endoplasmic reticulum	32.26	33.09
CDX88386	Canola	cytosol, plastid	99.28	30.98
Bra015656.1-P	Field mustard	cytosol	98.57	30.9
KRH18814	Soybean	cytosol, mitochondrion, plastid	49.1	29.91
CDX68044	Canola	plastid	92.47	28.35
CDX79234	Canola	plastid	92.11	28.21
GSMUA_Achr5P05820_001	Banana	mitochondrion, nucleus, peroxisome	44.09	26.91
AT1G77760.1	Thale cress	cytosol	88.17	26.83
GSMUA_Achr8P23160_001	Banana	mitochondrion	59.14	24.12
GSMUA_Achr5P05830_001	Banana	cytosol	30.82	24.02
KRH18816	Soybean	cytosol, mitochondrion, peroxisome	74.19	23.36
PGSC0003DMT400077648	Potato	cytosol	74.19	22.72
KRH16605	Soybean	cytosol	72.04	22.69
KRH16606	Soybean	cytosol	70.25	22.45
Solyc11g013810.1.1	Tomato	cytosol, nucleus	73.12	22.37
KRH53180	Soybean	cytosol, mitochondrion, peroxisome	71.33	22.36
VIT_18s0001g03910.t01	Wine grape	plastid	72.04	22.11
CDY28560	Canola	endoplasmic reticulum	14.34	20.94
Os08t0468700-00	Rice	plastid	67.03	20.41
Os08t0468100-01	Rice	plastid	67.03	20.41
EES13985	Sorghum	cytosol, mitochondrion, peroxisome, plastid	65.95	19.98
Zm00001d017025_P001	Maize	cytosol	63.08	19.78
TraesCS7D01G073700.1	Wheat	cytosol, nucleus, peroxisome	61.65	19.75
TraesCS7A01G078500.1	Wheat	cytosol	60.93	19.63
Os02t0770800-01	Rice	cytosol	62.01	19.46
TraesCS6A01G017500.2	Wheat	cytosol, plastid	63.44	19.37
TraesCS6D01G020700.1	Wheat	cytosol, plastid	63.44	19.37
TraesCS4A01G376700.1	Wheat	cytosol	62.01	19.31
TraesCS6B01G024900.1	Wheat	cytosol, plastid	63.08	19.26
TraesCS6D01G306000.1	Wheat	cytosol, peroxisome, plastid	61.29	19.11
EES07601	Sorghum	cytosol, mitochondrion, peroxisome	60.93	19.06
TraesCS6A01G326200.1	Wheat	plastid	60.93	18.91
OQU85223	Sorghum	cytosol	62.37	18.85
TraesCS6B01G356800.1	Wheat	cytosol, peroxisome, plastid	59.86	18.62
HORVU6Hr1G003300.1	Barley	mitochondrion	63.44	18.61
GSMUA_Achr3P07200_001	Banana	cytosol	61.65	15.29
GSMUA_Achr9P15480_001	Banana	cytosol	34.77	12.92
Zm00001d031769_P001	Maize	mitochondrion	31.54	12.79
Zm00001d052139_P001	Maize	cytosol, mitochondrion, peroxisome	28.67	12.35
CDY16891	Canola	golgi, plasma membrane, vacuole	33.69	11.82
Zm00001d018206_P001	Maize	peroxisome	27.96	11.82
Zm00001d049995_P001	Maize	cytosol, mitochondrion, peroxisome, plastid	26.88	11.11
CDX87504	Canola	cytosol	7.17	3.87

Protein Annotations

Gene3D:2.40.30.10	Gene3D:3.40.50.80	MapMan:50.1.7	GO:A0A078DE40	EnsemblPlants:CDX87505	ProteinID:CDX87505
ProteinID:CDX87505.1	InterPro:Fd_Rdtase_FAD-bd	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	GO:GO:0003674	GO:GO:0003824	GO:GO:0004128
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00146497001	InterPro:IPR017927
InterPro:NADH-Cyt_B5_reductase	InterPro:OxRdtase_FAD-bd_dom	InterPro:OxRdtase_FAD/NAD-bd	PFAM:PF00175	PFAM:PF00970	PRINTS:PR00371
PRINTS:PR00406	PFscan:PS51384	PANTHER:PTHR19370	PANTHER:PTHR19370:SF182	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52343
SUPFAM:SSF63380	UniParc:UPI0004EE6CC4	:	:	:	:

Description

BnaA07g33680D

Coordinates

chrLK031850:+:961471..962545

Molecular Weight (calculated)

31150.0 Da

IEP (calculated)

5.682

GRAVY (calculated)

-0.032

Length

279 amino acids

Sequence
(BLAST)

001: MSLLAPIREL APAKNIALVN PREKVPVKLI EKTSISHDVR RFRFALPSED QQLGLPVGKH IFLCATINDK LCLRAYTPTS TVDAVGYIDL VIKVYFKNVH
101: PRFPNGGLMS QHLDSLPIGA VLDIKGPLGH IEYQGRGKFM VSGKPKFANK LAMLAGGTGI TPIYQVIQSI LSDPEDETEM FVVYANRTED DILVREELEG
201: WASKFPDRLK IWYVVEIAKE GWEYSTGFIT EAVLREHVPE GLEGESLALA CGPPPMIQFA LQPNLEKMGY DIKEDLLIF

Best Arabidopsis Sequence Match ( AT1G37130.1 )
(BLAST)

001: MAASVDNRQY ARLEPGLNGV VRSYKPPVPG RSDSPKAHQN QTTNQTVFLK PAKVHDDDED VSSEDENETH NSNAVYYKEM IRKSNAELEP SVLDPRDEYT
101: ADSWIERNPS MVRLTGKHPF NSEAPLNRLM HHGFITPVPL HYVRNHGHVP KAQWAEWTVE VTGFVKRPMK FTMDQLVSEF AYREFAATLV CAGNRRKEQN
201: MVKKSKGFNW GSAGVSTSVW RGVPLCDVLR RCGIFSRKGG ALNVCFEGSE DLPGGAGTAG SKYGTSIKKE YAMDPSRDII LAYMQNGEYL TPDHGFPVRI
301: IIPGFIGGRM VKWLKRIIVT TKESDNFYHF KDNRVLPSLV DAELADEEGW WYKPEYIINE LNINSVITTP CHEEILPINA FTTQRPYTLK GYAYSGGGKK
401: VTRVEVTVDG GETWNVCALD HQEKPNKYGK FWCWCFWSLE VEVLDLLSAK EIAVRAWDET LNTQPEKMIW NLMGMMNNCW FRVKTNVCKP HKGEIGIVFE
501: HPTLPGNESG GWMAKERHLE KSADAPPSLK KSVSTPFMNT TAKMYSMSEV KKHNSADSCW IIVHGHIYDC TRFLMDHPGG SDSILINAGT DCTEEFEAIH
601: SDKAKKMLED YRIGELITTG YSSDSSSPNN SVHGSSAVFS LLAPIGEATP VRNLALVNPR AKVPVQLVEK TSISHDVRKF RFALPVEDMV LGLPVGKHIF
701: LCATINDKLC LRAYTPSSTV DVVGYFELVV KIYFGGVHPR FPNGGLMSQY LDSLPIGSTL EIKGPLGHVE YLGKGSFTVH GKPKFADKLA MLAGGTGITP
801: VYQIIQAILK DPEDETEMYV IYANRTEEDI LLREELDGWA EQYPDRLKVW YVVESAKEGW AYSTGFISEA IMREHIPDGL DGSALAMACG PPPMIQFAVQ
901: PNLEKMQYNI KEDFLIF

Arabidopsis Description

NIA2Nitrate reductase [NADH] 2 [Source:UniProtKB/Swiss-Prot;Acc:P11035]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.