Factsheet for TraesCS7A01G078500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS6A01G251400.1
TraesCS6B01G273900.1
TraesCS6D01G233200.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G77760.1	TraesCS6A01G251400.1	AT3G48150.1	21798944
AT1G77760.1	TraesCS6B01G273900.1	AT3G48150.1	21798944
AT1G77760.1	TraesCS6D01G233200.1	AT3G48150.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G073700.1	Wheat	cytosol, nucleus, peroxisome	95.38	94.83
TraesCS4A01G376700.1	Wheat	cytosol	94.23	91.07
TraesCS6A01G017500.2	Wheat	cytosol, plastid	86.95	82.39
Os08t0468100-01	Rice	plastid	84.99	80.35
EES13985	Sorghum	cytosol, mitochondrion, peroxisome, plastid	84.87	79.8
Os08t0468700-00	Rice	plastid	83.6	79.04
Zm00001d031769_P001	Maize	mitochondrion	62.7	78.92
Zm00001d049995_P001	Maize	cytosol, mitochondrion, peroxisome, plastid	61.43	78.81
GSMUA_Achr9P15480_001	Banana	cytosol	62.12	71.64
GSMUA_Achr8P23160_001	Banana	mitochondrion	56.0	70.91
CDY68886	Canola	cytosol, mitochondrion	56.93	67.81
VIT_18s0001g03910.t01	Wine grape	plastid	70.44	67.11
KRH18816	Soybean	cytosol, mitochondrion, peroxisome	68.24	66.7
TraesCS6A01G326200.1	Wheat	plastid	68.82	66.3
KRH53180	Soybean	cytosol, mitochondrion, peroxisome	67.9	66.07
Solyc11g013810.1.1	Tomato	cytosol, nucleus	68.71	65.24
PGSC0003DMT400077648	Potato	cytosol	68.59	65.2
CDX68044	Canola	plastid	66.63	63.41
Bra003670.1-P	Field mustard	plastid	66.63	63.41
KRH16605	Soybean	cytosol	64.78	63.32
Bra015656.1-P	Field mustard	cytosol	65.01	63.26
CDX88386	Canola	cytosol, plastid	65.13	63.09
CDX79234	Canola	plastid	66.28	63.01
KRH16606	Soybean	cytosol	63.39	62.89
AT1G37130.1	Thale cress	cytosol	66.4	62.7
Bra008333.1-P	Field mustard	plastid	65.24	62.36
AT1G77760.1	Thale cress	cytosol	65.13	61.5
CDX87505	Canola	cytosol, mitochondrion, peroxisome, plastid	19.63	60.93
KRH18814	Soybean	cytosol, mitochondrion, plastid	32.1	60.7
CDY26836	Canola	cytosol	38.34	59.6
CDX87504	Canola	cytosol	35.22	58.99
GSMUA_Achr3P07200_001	Banana	cytosol	69.98	53.87
GSMUA_Achr5P05830_001	Banana	cytosol	18.24	44.13
GSMUA_Achr5P05820_001	Banana	mitochondrion, nucleus, peroxisome	23.09	43.76
TraesCS3A01G338700.1	Wheat	golgi	12.47	38.71
TraesCS1A01G305700.1	Wheat	golgi	12.12	37.63
TraesCS3A01G128600.1	Wheat	mitochondrion	12.47	34.84

Protein Annotations

Gene3D:2.40.30.10	Gene3D:2.60.40.650	MapMan:25.1.4.1	Gene3D:3.10.120.10	Gene3D:3.40.50.80	Gene3D:3.90.420.10
InterPro:Cyt_B5-like_heme/steroid-bd	InterPro:Cyt_B5-like_heme/steroid_sf	InterPro:Cyt_B5_heme-BS	InterPro:Fd_Rdtase_FAD-bd	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0006809	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016491	GO:GO:0020037	GO:GO:0030151	GO:GO:0042128	GO:GO:0043546
GO:GO:0050464	GO:GO:0055114	InterPro:IPR001199	InterPro:IPR017927	InterPro:IPR036374	InterPro:IPR036400
InterPro:Ig_E-set	InterPro:MoCF_OxRdtse_dimer	InterPro:Mopterin_OxRdtase_euk	InterPro:NADH-Cyt_B5_reductase	InterPro:Nitr_rd_NADH	InterPro:OxRdtase_FAD-bd_dom
InterPro:OxRdtase_FAD/NAD-bd	InterPro:OxRdtase_Mopterin-bd_dom	InterPro:OxRdtase_Mopterin-bd_sf	InterPro:OxRdtase_Mopterin_BS	PFAM:PF00173	PFAM:PF00174
PFAM:PF00175	PFAM:PF00970	PFAM:PF03404	PIRSF:PIRSF000233	PRINTS:PR00363	PRINTS:PR00371
PRINTS:PR00406	PRINTS:PR00407	ScanProsite:PS00191	ScanProsite:PS00559	PFscan:PS50255	PFscan:PS51384
PANTHER:PTHR19370	PANTHER:PTHR19370:SF182	InterPro:Riboflavin_synthase-like_b-brl	SMART:SM01117	SUPFAM:SSF52343	SUPFAM:SSF55856
SUPFAM:SSF56524	SUPFAM:SSF63380	SUPFAM:SSF81296	EnsemblPlantsGene:TraesCS7A01G078500	EnsemblPlants:TraesCS7A01G078500.1	TIGR:cd02112
TIGR:cd06183	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7A:-:43180624..43185364

Molecular Weight (calculated)

96959.7 Da

IEP (calculated)

6.965

GRAVY (calculated)

-0.391

Length

866 amino acids

Sequence
(BLAST)

001: MAASVELDEL ARTPRVEEEA SDDEEEHDNW RELYGSQLQL EVEPPVRDAR DEGTADAWTE RNPSLIRLTG KHPFNCEPPL ARLMHHGFIT PAPLHYVRNH
101: GPVPRGDWST WTVEVSGLVT RPARFTMDEL VREFPAAELP VTLVCAGNRR KEQNMVRQTA GFNWGAAGVS TSVWRGARLR DVLRRCGIKK GRRAALHVCF
201: VGAEDLPGGG GGAKYGTSVT REWALDPSRD IMLAYAQNGE PLLPDHGFPV RVIIPGCIGG RMVKWLTRIV VTGAESDNYY HFKDNRVLPS HVDAELADAQ
301: AWWYKSEYII NELNTNSVIT TPGHDEILPI NAFTTQRAYT MKGYAYAGGG KKIIRVEVTL DGGETWMLCT LDIPEKPNKY GRYWCWCFWS VDVEVLDLLG
401: AKEVAVRAWD QAQNTQPEKL IWNLMGMMNN CWFKVKVNVC RPHKREIGLV FEHPTQPANQ TGGWMARQKH METAAPGLKR STSTPFIHTT DDKQFTMSEV
501: RKHGSQDSAW IVVHGHVYDC TAFLKDHPGG ADSILINAGT DCTEEFDAIH SDKAKSLLDT HRIGQLITTG AGYNSDNSVH GGSSLAPIRE ATKAAAAPIA
601: LSSPREKIRC RLVDKKELSR DVRLFRFALP SSDQVLGLPV GKHIFVCANI GGKLCMRPYT PTSMVDEVGQ FELLVKVYFK NEHPKFSDGG LMTQYLESLQ
701: VGSSHIEVKG PLGQVEYTGR GSFMIGGKQR RARRLAMICG GSGITPMYQV IQAVLRDQPE DKTEMHLVYA NRTEDDILLR DELDRWAAEH PDKLKVWYVV
801: DQVKRPEEGW KFSVGHVRED ILRAHVPEGG DDTFALACGP PPMIKFAITP NLEKMKYDMA NSFISF

Best Arabidopsis Sequence Match ( AT1G37130.1 )
(BLAST)

001: MAASVDNRQY ARLEPGLNGV VRSYKPPVPG RSDSPKAHQN QTTNQTVFLK PAKVHDDDED VSSEDENETH NSNAVYYKEM IRKSNAELEP SVLDPRDEYT
101: ADSWIERNPS MVRLTGKHPF NSEAPLNRLM HHGFITPVPL HYVRNHGHVP KAQWAEWTVE VTGFVKRPMK FTMDQLVSEF AYREFAATLV CAGNRRKEQN
201: MVKKSKGFNW GSAGVSTSVW RGVPLCDVLR RCGIFSRKGG ALNVCFEGSE DLPGGAGTAG SKYGTSIKKE YAMDPSRDII LAYMQNGEYL TPDHGFPVRI
301: IIPGFIGGRM VKWLKRIIVT TKESDNFYHF KDNRVLPSLV DAELADEEGW WYKPEYIINE LNINSVITTP CHEEILPINA FTTQRPYTLK GYAYSGGGKK
401: VTRVEVTVDG GETWNVCALD HQEKPNKYGK FWCWCFWSLE VEVLDLLSAK EIAVRAWDET LNTQPEKMIW NLMGMMNNCW FRVKTNVCKP HKGEIGIVFE
501: HPTLPGNESG GWMAKERHLE KSADAPPSLK KSVSTPFMNT TAKMYSMSEV KKHNSADSCW IIVHGHIYDC TRFLMDHPGG SDSILINAGT DCTEEFEAIH
601: SDKAKKMLED YRIGELITTG YSSDSSSPNN SVHGSSAVFS LLAPIGEATP VRNLALVNPR AKVPVQLVEK TSISHDVRKF RFALPVEDMV LGLPVGKHIF
701: LCATINDKLC LRAYTPSSTV DVVGYFELVV KIYFGGVHPR FPNGGLMSQY LDSLPIGSTL EIKGPLGHVE YLGKGSFTVH GKPKFADKLA MLAGGTGITP
801: VYQIIQAILK DPEDETEMYV IYANRTEEDI LLREELDGWA EQYPDRLKVW YVVESAKEGW AYSTGFISEA IMREHIPDGL DGSALAMACG PPPMIQFAVQ
901: PNLEKMQYNI KEDFLIF

Arabidopsis Description

NIA2Nitrate reductase [NADH] 2 [Source:UniProtKB/Swiss-Prot;Acc:P11035]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.