CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid, cytosol

Predictor Summary:

plastid 3
mitochondrion 3
peroxisome 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES07517

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G77760.1	EES07517	AT3G48150.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d049995_P001	Maize	cytosol, mitochondrion, peroxisome, plastid	69.16	94.37
Zm00001d031769_P001	Maize	mitochondrion	68.51	91.72
Os08t0468100-01	Rice	plastid	88.6	89.08
Os08t0468700-00	Rice	plastid	87.41	87.88
TraesCS6D01G020700.1	Wheat	cytosol, plastid	84.26	84.9
TraesCS6B01G024900.1	Wheat	cytosol, plastid	84.26	84.9
TraesCS6A01G017500.2	Wheat	cytosol, plastid	84.26	84.9
TraesCS7A01G078500.1	Wheat	cytosol	79.8	84.87
TraesCS7D01G073700.1	Wheat	cytosol, nucleus, peroxisome	79.7	84.27
HORVU6Hr1G003300.1	Barley	mitochondrion	84.47	81.81
TraesCS4A01G376700.1	Wheat	cytosol	79.48	81.7
GSMUA_Achr9P15480_001	Banana	cytosol	64.39	78.96
GSMUA_Achr8P23160_001	Banana	mitochondrion	55.59	74.85
OQU85223	Sorghum	cytosol	73.4	73.24
VIT_18s0001g03910.t01	Wine grape	plastid	72.2	73.16
EES07601	Sorghum	cytosol, mitochondrion, peroxisome	70.58	72.87
CDY68886	Canola	cytosol, mitochondrion	57.44	72.76
KRH18816	Soybean	cytosol, mitochondrion, peroxisome	68.95	71.67
KRH53180	Soybean	cytosol, mitochondrion, peroxisome	68.73	71.12
PGSC0003DMT400077648	Potato	cytosol	69.6	70.36
Solyc11g013810.1.1	Tomato	cytosol, nucleus	69.49	70.18
Bra003670.1-P	Field mustard	plastid	67.32	68.13
Bra015656.1-P	Field mustard	cytosol	65.8	68.09
CDX88386	Canola	cytosol, plastid	66.02	68.01
CDX79234	Canola	plastid	67.21	67.95
CDX68044	Canola	plastid	67.1	67.91
AT1G37130.1	Thale cress	cytosol	67.43	67.72
Bra008333.1-P	Field mustard	plastid	66.02	67.11
KRH16605	Soybean	cytosol	64.28	66.82
AT1G77760.1	Thale cress	cytosol	66.34	66.63
KRH16606	Soybean	cytosol	62.65	66.09
CDX87505	Canola	cytosol, mitochondrion, peroxisome, plastid	19.98	65.95
CDY26836	Canola	cytosol	38.65	63.91
KRH18814	Soybean	cytosol, mitochondrion, plastid	31.38	63.1
CDX87504	Canola	cytosol	35.4	63.06
GSMUA_Achr3P07200_001	Banana	cytosol	71.99	58.93
GSMUA_Achr5P05820_001	Banana	mitochondrion, nucleus, peroxisome	23.78	47.92
GSMUA_Achr5P05830_001	Banana	cytosol	17.92	46.09
EES03792	Sorghum	endoplasmic reticulum	12.05	39.78
EES18413	Sorghum	plastid	11.94	39.43
EES00217	Sorghum	mitochondrion	11.94	35.37

Protein Annotations

Gene3D:2.40.30.10	Gene3D:2.60.40.650	MapMan:25.1.4.1	Gene3D:3.10.120.10	Gene3D:3.40.50.80	Gene3D:3.90.420.10
EntrezGene:8083522	UniProt:C5YM76	InterPro:Cyt_B5-like_heme/steroid-bd	InterPro:Cyt_B5-like_heme/steroid_sf	InterPro:Cyt_B5_heme-BS	EnsemblPlants:EES13985
ProteinID:EES13985	ProteinID:EES13985.1	InterPro:Fd_Rdtase_FAD-bd	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0006809	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009703	GO:GO:0009987
GO:GO:0016491	GO:GO:0020037	GO:GO:0030151	GO:GO:0042128	GO:GO:0043546	GO:GO:0046872
GO:GO:0050464	GO:GO:0055114	InterPro:IPR001199	InterPro:IPR017927	InterPro:IPR036374	InterPro:IPR036400
InterPro:Ig_E-set	InterPro:MoCF_OxRdtse_dimer	InterPro:Mopterin_OxRdtase_euk	InterPro:NADH-Cyt_B5_reductase	InterPro:Nitr_rd_NADH	InterPro:OxRdtase_FAD-bd_dom
InterPro:OxRdtase_FAD/NAD-bd	InterPro:OxRdtase_Mopterin-bd_dom	InterPro:OxRdtase_Mopterin-bd_sf	InterPro:OxRdtase_Mopterin_BS	PFAM:PF00173	PFAM:PF00174
PFAM:PF00175	PFAM:PF00970	PFAM:PF03404	PIRSF:PIRSF000233	PRINTS:PR00363	PRINTS:PR00371
PRINTS:PR00406	PRINTS:PR00407	ScanProsite:PS00191	ScanProsite:PS00559	PFscan:PS50255	PFscan:PS51384
PANTHER:PTHR19370	PANTHER:PTHR19370:SF100	InterPro:Riboflavin_synthase-like_b-brl	SMART:SM01117	EnsemblPlantsGene:SORBI_3007G153900	SUPFAM:SSF52343
SUPFAM:SSF55856	SUPFAM:SSF56524	SUPFAM:SSF63380	SUPFAM:SSF81296	unigene:Sbi.7827	UniParc:UPI0001A87A67
RefSeq:XP_002444490.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:58690766..58695615

Molecular Weight (calculated)

102044.0 Da

IEP (calculated)

6.673

GRAVY (calculated)

-0.360

Length

921 amino acids

Sequence
(BLAST)

001: MAAVEPRQFG RLEPGVATNG AKAYPPPASH LPRRADSPVR GCGFPPLVSP PPRSNKPDDA SPSDDDDDDD EDWRSLYGSH LQLEVEPAVH DARDEGTADA
101: WIERNPSLVR LTGKHPFNCE PPLARLMHHG FITPAPLHYV RNHGAVPRGD WATWAVEVTG LVKRPARITM EELARDFPAV EIPVTLACAG NRRKEQNMVR
201: QTVGFNWGAA GVSTSVWRGA RLRDVLRRCG IMPRKGPGGA LNVCFEGAED LPGGGGGGGG STKYGTSVTR EWALDPSRDI MLAYMQNGEP LLPDHGFPVR
301: VIIPGCIGGR MVKWLKRIVV TPAESDNYYH YKDNRVLPSH VDAELANAEA WWYKPEYIIN ELNINSVITT PGHDEILPIN AITTQRGYTM KGYAYSGGGK
401: KVTRVEVTLD GGETWLVCDL DHPEKPNKYG KYWCWCFWSV EVEVLDLLGA KEIAVRAWDQ SLNTQPEKLI WNLMGMMNNC WFKVKVNVCR PHRGEIGLVF
501: EHPTQPGNQS GGWMARQKHL ETAEAAAPGL KRSTSTPFMS TISDGKQFTM SEVRRHASQE SAWIVVHGHV YDCTKFLKDH PGGADSILIN AGTDCTEEFD
601: AIHSDKAKAL LDTYRIGELI TTGTGYSSDN SVHGGSAVLS NLAPIREAVR APAPVALSNP REKIHCRLVG KKELSRDVRL FRFALPSSDQ VLGLPIGKHI
701: FVCATIDGKL CMRAYTPTSM VDEIGHFDLL VKVYFKNEHP KFPAGGLMTQ YLDSLPVGSY IDVKGPLGHV EYTGRGSFVI NGKQRHASRL AMICGGSGIT
801: PMYQVIQAVL RDQPEDQTEM HLVYANRTED DILLRDELDR WAAEYPDRLK VWYVIDQVKR PEEGWKYSVG FVTEAVLREH VPEGGDDTLA LACGPPPMIQ
901: FAVSPNLEKM NYDMANSFVV F

Best Arabidopsis Sequence Match ( AT1G37130.1 )
(BLAST)

001: MAASVDNRQY ARLEPGLNGV VRSYKPPVPG RSDSPKAHQN QTTNQTVFLK PAKVHDDDED VSSEDENETH NSNAVYYKEM IRKSNAELEP SVLDPRDEYT
101: ADSWIERNPS MVRLTGKHPF NSEAPLNRLM HHGFITPVPL HYVRNHGHVP KAQWAEWTVE VTGFVKRPMK FTMDQLVSEF AYREFAATLV CAGNRRKEQN
201: MVKKSKGFNW GSAGVSTSVW RGVPLCDVLR RCGIFSRKGG ALNVCFEGSE DLPGGAGTAG SKYGTSIKKE YAMDPSRDII LAYMQNGEYL TPDHGFPVRI
301: IIPGFIGGRM VKWLKRIIVT TKESDNFYHF KDNRVLPSLV DAELADEEGW WYKPEYIINE LNINSVITTP CHEEILPINA FTTQRPYTLK GYAYSGGGKK
401: VTRVEVTVDG GETWNVCALD HQEKPNKYGK FWCWCFWSLE VEVLDLLSAK EIAVRAWDET LNTQPEKMIW NLMGMMNNCW FRVKTNVCKP HKGEIGIVFE
501: HPTLPGNESG GWMAKERHLE KSADAPPSLK KSVSTPFMNT TAKMYSMSEV KKHNSADSCW IIVHGHIYDC TRFLMDHPGG SDSILINAGT DCTEEFEAIH
601: SDKAKKMLED YRIGELITTG YSSDSSSPNN SVHGSSAVFS LLAPIGEATP VRNLALVNPR AKVPVQLVEK TSISHDVRKF RFALPVEDMV LGLPVGKHIF
701: LCATINDKLC LRAYTPSSTV DVVGYFELVV KIYFGGVHPR FPNGGLMSQY LDSLPIGSTL EIKGPLGHVE YLGKGSFTVH GKPKFADKLA MLAGGTGITP
801: VYQIIQAILK DPEDETEMYV IYANRTEEDI LLREELDGWA EQYPDRLKVW YVVESAKEGW AYSTGFISEA IMREHIPDGL DGSALAMACG PPPMIQFAVQ
901: PNLEKMQYNI KEDFLIF

Arabidopsis Description

NIA2Nitrate reductase [NADH] 2 [Source:UniProtKB/Swiss-Prot;Acc:P11035]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.