CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
peroxisome 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH24006
KRH27971
KRH29310
KRH77487

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G77760.1	KRH24006	AT3G48150.1	21798944
AT1G77760.1	KRH27971	AT3G48150.1	21798944
AT1G77760.1	KRH29310	AT3G48150.1	21798944
AT1G77760.1	KRH77487	AT3G48150.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH18814	Soybean	cytosol, mitochondrion, plastid	43.0	83.19
KRH18816	Soybean	cytosol, mitochondrion, peroxisome	83.18	83.18
KRH16606	Soybean	cytosol	77.65	78.81
KRH53180	Soybean	cytosol, mitochondrion, peroxisome	76.3	75.96
CDY68886	Canola	cytosol, mitochondrion	61.06	74.42
VIT_18s0001g03910.t01	Wine grape	plastid	74.49	72.61
CDX87505	Canola	cytosol, mitochondrion, peroxisome, plastid	22.69	72.04
Solyc11g013810.1.1	Tomato	cytosol, nucleus	72.8	70.72
PGSC0003DMT400077648	Potato	cytosol	72.57	70.58
Bra008333.1-P	Field mustard	plastid	70.88	69.32
Bra003670.1-P	Field mustard	plastid	70.99	69.12
CDX68044	Canola	plastid	70.77	68.9
Bra015656.1-P	Field mustard	cytosol	69.19	68.88
CDX88386	Canola	cytosol, plastid	69.41	68.79
CDX79234	Canola	plastid	70.65	68.72
AT1G37130.1	Thale cress	cytosol	70.88	68.48
GSMUA_Achr8P23160_001	Banana	mitochondrion	52.6	68.13
CDY26836	Canola	cytosol	42.55	67.68
AT1G77760.1	Thale cress	cytosol	69.98	67.61
GSMUA_Achr9P15480_001	Banana	cytosol	56.09	66.18
TraesCS7A01G078500.1	Wheat	cytosol	63.32	64.78
TraesCS7D01G073700.1	Wheat	cytosol, nucleus, peroxisome	63.32	64.41
EES13985	Sorghum	cytosol, mitochondrion, peroxisome, plastid	66.82	64.28
TraesCS6D01G306000.1	Wheat	cytosol, peroxisome, plastid	64.45	63.8
Os08t0468100-01	Rice	plastid	65.91	63.76
Os02t0770800-01	Rice	cytosol	63.88	63.67
TraesCS6B01G024900.1	Wheat	cytosol, plastid	65.35	63.35
TraesCS6A01G017500.2	Wheat	cytosol, plastid	65.24	63.24
TraesCS6D01G020700.1	Wheat	cytosol, plastid	65.24	63.24
Os08t0468700-00	Rice	plastid	65.12	62.99
Zm00001d031769_P001	Maize	mitochondrion	48.87	62.94
TraesCS6A01G326200.1	Wheat	plastid	63.77	62.85
TraesCS4A01G376700.1	Wheat	cytosol	63.54	62.83
Zm00001d049995_P001	Maize	cytosol, mitochondrion, peroxisome, plastid	47.74	62.67
Zm00001d052139_P001	Maize	cytosol, mitochondrion, peroxisome	45.82	62.65
TraesCS6B01G356800.1	Wheat	cytosol, peroxisome, plastid	63.43	62.65
EES07601	Sorghum	cytosol, mitochondrion, peroxisome	62.64	62.22
Zm00001d018206_P001	Maize	peroxisome	46.28	62.12
HORVU6Hr1G003300.1	Barley	mitochondrion	65.35	60.88
Zm00001d017025_P001	Maize	cytosol	59.59	59.33
OQU85223	Sorghum	cytosol	60.38	57.96
GSMUA_Achr3P07200_001	Banana	cytosol	64.45	50.76
KRG89951	Soybean	mitochondrion	6.88	44.2
GSMUA_Achr5P05820_001	Banana	mitochondrion, nucleus, peroxisome	21.9	42.45
KRG94933	Soybean	mitochondrion	11.29	41.49
GSMUA_Achr5P05830_001	Banana	cytosol	16.25	40.22
KRH64963	Soybean	endoplasmic reticulum	11.85	37.77
KRH44741	Soybean	endoplasmic reticulum, peroxisome, plastid	12.53	37.37
KRH13184	Soybean	endoplasmic reticulum, peroxisome, plastid	12.53	37.37
KRH03716	Soybean	mitochondrion	12.42	34.48
KRH56619	Soybean	mitochondrion	12.53	34.37
KRG89948	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	5.3	33.57

Protein Annotations

EntrezGene:100818103	Gene3D:2.40.30.10	Gene3D:2.60.40.650	MapMan:25.1.4.1	Gene3D:3.10.120.10	Gene3D:3.40.50.80
Gene3D:3.90.420.10	EMBL:ACUP02008960	ncoils:Coil	InterPro:Cyt_B5-like_heme/steroid-bd	InterPro:Cyt_B5-like_heme/steroid_sf	InterPro:Cyt_B5_heme-BS
InterPro:Fd_Rdtase_FAD-bd	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	EnsemblPlantsGene:GLYMA_14G164900	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006809
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009703	GO:GO:0009987	GO:GO:0016491
GO:GO:0020037	GO:GO:0030151	GO:GO:0042128	GO:GO:0043546	GO:GO:0046872	GO:GO:0050464
GO:GO:0055114	UniProt:I1MAM4	InterPro:IPR001199	InterPro:IPR017927	InterPro:IPR036374	InterPro:IPR036400
InterPro:Ig_E-set	EnsemblPlants:KRH16605	ProteinID:KRH16605	ProteinID:KRH16605.1	InterPro:MoCF_OxRdtse_dimer	InterPro:Mopterin_OxRdtase_euk
InterPro:NADH-Cyt_B5_reductase	InterPro:Nitr_rd_NADH	InterPro:OxRdtase_FAD-bd_dom	InterPro:OxRdtase_FAD/NAD-bd	InterPro:OxRdtase_Mopterin-bd_dom	InterPro:OxRdtase_Mopterin-bd_sf
InterPro:OxRdtase_Mopterin_BS	PFAM:PF00173	PFAM:PF00174	PFAM:PF00175	PFAM:PF00970	PFAM:PF03404
PIRSF:PIRSF000233	PRINTS:PR00363	PRINTS:PR00371	PRINTS:PR00406	PRINTS:PR00407	ScanProsite:PS00191
ScanProsite:PS00559	PFscan:PS50255	PFscan:PS51384	PANTHER:PTHR19370	PANTHER:PTHR19370:SF182	InterPro:Riboflavin_synthase-like_b-brl
SMART:SM01117	SUPFAM:SSF52343	SUPFAM:SSF55856	SUPFAM:SSF56524	SUPFAM:SSF63380	SUPFAM:SSF81296
UniParc:UPI000233AE3B	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr14:-:40721164..40727261

Molecular Weight (calculated)

99904.8 Da

IEP (calculated)

7.367

GRAVY (calculated)

-0.407

Length

886 amino acids

Sequence
(BLAST)

001: MAASISNRQY GSHINDVVGR SKPPPPLDFD TDFSSDEEND YASYLKELNQ LIQKGNAEME DSILDPRHEG TADEWVPRNA SMVRLTGKYP FNAEAPLPRL
101: MHHGFITPVP LHYVRSHGSV VKGKFEDWTV EVTGLVKNPT RLTLETLLKS FPQREFPATL VCAGNRRKEQ NMVKQSNGFN WGCGGTSTTL WRGVPLRHVL
201: RHCGILSHSK GAHYVNFEGA EDLPGGGGCK YGTSITREAA MDPSRDIIIA YMQNGELLAP DHGYPVRMII PGFIGGRMVK WLKRIVVSEH ESESYYHYKD
301: NRVLPSQVDS EHADAEGWWY KPEYIINELN INSVITTPCH QEILPINSWT TQRPYLLRGY AYTGGGRKLT RVEVTLDVGK TWRLCKLDRT EKPNKYGKYW
401: CWCFWSLEVE VMDLLGTKEI AVRAWDEGLN TQPEHLIWNV MGMMNNCWFR VKTNVAKPHK GEIGIVFEHP TQPANQPGGW MVKEKHLEKS LEKLPSLKKS
501: GSTPSMNTAS KMFTISEVKK HCTSDSTWII IHGHVYDCTR FLKDHPGGVD SILINAGTDC TEEFDAIHSE KAKKMLEDFR IGELMSTGYT SDSSPNNSVH
601: GNSEFTHLPL IKEITTTPPP PPRDVALKTR EKIPCKLVSK TSISHDVRLF RFALPSKDQL LGLPVGKHIF LCATINEKLC MRAYTPTSSV DEVGFFDLAI
701: KVYFKGVHPK FPKGGLMSQH LDSLSIGSVL DVKGPLGHIE YTGRGNFLVH GKQRFAKRLA MLAGGTGITP IYQVAQAILK DPEDPTEMHV VYANKTEDDI
801: LLKEEMDVWA KKHSDRFKVW YVVETAREGW EYSVGFITES IMREHLPETS TDALALTCGP PPMIQFAVQP NLEKMGYDIK NDLLVF

Best Arabidopsis Sequence Match ( AT1G77760.1 )
(BLAST)

001: MATSVDNRHY PTMNGVAHAF KPPLVPSPRS FDRHRHQNQT LDVILTETKI VKETEVITTV VDSYDDSSSD DEDESHNRNV PYYKELVKKS NSDLEPSILD
101: PRDESTADSW IQRNSSMLRL TGKHPFNAEA PLPRLMHHGF ITPVPLHYVR NHGAVPKANW SDWSIEITGL VKRPAKFTME ELISEFPSRE FPVTLVCAGN
201: RRKEQNMVKQ TIGFNWGSAG VSTSLWKGIP LSEILRRCGI YSRRGGALNV CFEGAEDLPG GGGSKYGTSI KKEMAMDPAR DIILAYMQNG ELLTPDHGFP
301: VRVIVPGFIG GRMVKWLKRI IVTPQESDSY YHYKDNRVLP SLVDAELANS EAWWYKPEYI INELNINSVI TTPGHAEILP INAFTTQKPY TLKGYAYSGG
401: GKKVTRVEVT LDGGDTWSVC ELDHQEKPNK YGKFWCWCFW SLDVEVLDLL SAKDVAVRAW DESFNTQPDK LIWNLMGMMN NCWFRIRTNV CKPHRGEIGI
501: VFEHPTRPGN QSGGWMAKER QLEISSESNN TLKKSVSSPF MNTASKMYSI SEVRKHNTAD SAWIIVHGHI YDCTRFLKDH PGGTDSILIN AGTDCTEEFE
601: AIHSDKAKKL LEDYRIGELI TTGYDSSPNV SVHGASNFGP LLAPIKELTP QKNIALVNPR EKIPVRLIEK TSISHDVRKF RFALPSEDQQ LGLPVGKHVF
701: VCANINDKLC LRAYTPTSAI DAVGHIDLVV KVYFKDVHPR FPNGGLMSQH LDSLPIGSMI DIKGPLGHIE YKGKGNFLVS GKPKFAKKLA MLAGGTGITP
801: IYQIIQSILS DPEDETEMYV VYANRTEDDI LVREELEGWA SKHKERLKIW YVVEIAKEGW SYSTGFITEA VLREHIPEGL EGESLALACG PPPMIQFALQ
901: PNLEKMGYNV KEDLLIF

Arabidopsis Description

NIA1Nitrate reductase [Source:UniProtKB/TrEMBL;Acc:A0A178WBR8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.