CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, peroxisome

Predictor Summary:

extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 2
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, peroxisome, plastid
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	mitochondrion
MultiLoc:	peroxisome
Plant-mPloc:	mitochondrion
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH44741	Soybean	endoplasmic reticulum, peroxisome, plastid	94.28	94.28
KRG94933	Soybean	mitochondrion	57.91	71.37
KRG89951	Soybean	mitochondrion	32.66	70.29
KRG89948	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	31.65	67.14
KRH64963	Soybean	endoplasmic reticulum	62.63	66.91
VIT_13s0047g01190.t01	Wine grape	mitochondrion	64.31	65.41
KRH56619	Soybean	mitochondrion	40.4	37.15
KRH03716	Soybean	mitochondrion	39.73	36.99
KRH18814	Soybean	cytosol, mitochondrion, plastid	25.93	16.81
KRH53180	Soybean	cytosol, mitochondrion, peroxisome	39.73	13.26
KRH16605	Soybean	cytosol	37.37	12.53
KRH18816	Soybean	cytosol, mitochondrion, peroxisome	37.04	12.42
KRH16606	Soybean	cytosol	36.36	12.37

Protein Annotations

EntrezGene:100809584	Gene3D:2.40.30.10	Gene3D:3.40.50.80	MapMan:50.1.6	UniProt:A0A0R4J5H2	EMBL:ACUP02009668
InterPro:Fd_Rdtase_FAD-bd	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	EnsemblPlantsGene:GLYMA_15G220800	GO:GO:0003674	GO:GO:0003824	GO:GO:0004128
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0055114	InterPro:IPR017927	EnsemblPlants:KRH13184	ProteinID:KRH13184	ProteinID:KRH13184.1	InterPro:NADH-Cyt_B5_reductase
InterPro:OxRdtase_FAD-bd_dom	InterPro:OxRdtase_FAD/NAD-bd	PFAM:PF00175	PFAM:PF00970	PRINTS:PR00371	PRINTS:PR00406
PFscan:PS51384	PANTHER:PTHR19370	PANTHER:PTHR19370:SF97	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52343	SUPFAM:SSF63380
TMHMM:TMhelix	UniParc:UPI0001D62E82	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr15:+:39878275..39882927

Molecular Weight (calculated)

33445.8 Da

IEP (calculated)

9.826

GRAVY (calculated)

-0.242

Length

297 amino acids

Sequence
(BLAST)

001: MLELPFNMAL RFPNLDFKSL PFAENLNTEL LGGVVALVAV GFTVAYIYYR TKHPKGSLDP KNFKEFKLIK KTQLSHNVAR FRFALPTPSS VLGLPVGKNI
101: LARGKDSQGE EVMRSYTPIT LDSDIGYFEL VVKMYPNGKM SHHFRQMKEG DYLAVRGPKG RFSYKPGQAR AFGMIAGGSG ITPMFQLIRA ILENPKDKTK
201: VNLVYANVTV DDILLKEELD NFTNKFPQRF EVYHVLNKPP EQWNGGIGFI SKEIIKSHCP EPAHDIQILR CGPPPMNKAM AAHLDALGYT SNMQFEF

Best Arabidopsis Sequence Match ( AT5G17770.1 )
(BLAST)

001: MDTEFLRTLD RQILLGVFVA FVAVGAGAAY FLTSSKKRRV CLDPENFKEF KLVKRHQLSH NVAKFVFELP TSTSVLGLPI GQHISCRGKD GQGEDVIKPY
101: TPTTLDSDVG RFELVIKMYP QGRMSHHFRE MRVGDHLAVK GPKGRFKYQP GQFRAFGMLA GGSGITPMFQ VARAILENPT DKTKVHLIYA NVTYDDILLK
201: EELEGLTTNY PEQFKIFYVL NQPPEVWDGG VGFVSKEMIQ THCPAPASDI QILRCGPPPM NKAMAANLEA LGYSPEMQFQ F

Arabidopsis Description

CBR1NADH-cytochrome b5 reductase [Source:UniProtKB/TrEMBL;Acc:A0A178US77]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,mitochondrion,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.