Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- peroxisome 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_06s0009g01710.t01 | Wine grape | endoplasmic reticulum | 81.43 | 41.01 |
| KRH64963 | Soybean | endoplasmic reticulum | 73.57 | 37.05 |
| KRG94933 | Soybean | mitochondrion | 60.71 | 35.27 |
| KRH13184 | Soybean | endoplasmic reticulum, peroxisome, plastid | 67.14 | 31.65 |
| KRH44741 | Soybean | endoplasmic reticulum, peroxisome, plastid | 64.29 | 30.3 |
| KRH56619 | Soybean | mitochondrion | 37.86 | 16.41 |
| KRH03716 | Soybean | mitochondrion | 37.14 | 16.3 |
| KRH18814 | Soybean | cytosol, mitochondrion, plastid | 22.86 | 6.99 |
| KRH53180 | Soybean | cytosol, mitochondrion, peroxisome | 35.0 | 5.51 |
| KRH16606 | Soybean | cytosol | 33.57 | 5.38 |
| KRH16605 | Soybean | cytosol | 33.57 | 5.3 |
| KRH18816 | Soybean | cytosol, mitochondrion, peroxisome | 33.57 | 5.3 |
| KRG89951 | Soybean | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| Gene3D:2.40.30.10 | MapMan:35.1 | UniProt:A0A0R0E7N5 | EMBL:ACUP02012474 | InterPro:Fd_Rdtase_FAD-bd | EnsemblPlantsGene:GLYMA_20G0576002 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016491 | GO:GO:0055114 | InterPro:IPR017927 | ProteinID:KRG89947.1 | EnsemblPlants:KRG89948 |
| ProteinID:KRG89948 | ProteinID:KRG89948.1 | ProteinID:KRG89949.1 | InterPro:NADH-Cyt_B5_reductase | InterPro:OxRdtase_FAD-bd_dom | PFAM:PF00970 |
| PRINTS:PR00406 | PFscan:PS51384 | PANTHER:PTHR19370 | PANTHER:PTHR19370:SF97 | InterPro:Riboflavin_synthase-like_b-brl | SUPFAM:SSF63380 |
| TMHMM:TMhelix | UniParc:UPI0006ED9EC1 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr20:+:16867858..16869903
Molecular Weight (calculated)
15878.3 Da
IEP (calculated)
9.295
GRAVY (calculated)
-0.311
Length
140 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFSQSHRVE MISMAVALVA IVGGTAYYYY VTKKPKGCLD PENFKEFKLV KRTQLSHNVA TFRFDLPTPK SVLGLPIGQH ISCRGKDSLG EEVVKPYTPT
101: TLDTDVGYFE LVVKMYPQGR MSHHFREIRE GDYMAVKGPK
101: TLDTDVGYFE LVVKMYPQGR MSHHFREIRE GDYMAVKGPK
001: MDTEFLRTLD RQILLGVFVA FVAVGAGAAY FLTSSKKRRV CLDPENFKEF KLVKRHQLSH NVAKFVFELP TSTSVLGLPI GQHISCRGKD GQGEDVIKPY
101: TPTTLDSDVG RFELVIKMYP QGRMSHHFRE MRVGDHLAVK GPKGRFKYQP GQFRAFGMLA GGSGITPMFQ VARAILENPT DKTKVHLIYA NVTYDDILLK
201: EELEGLTTNY PEQFKIFYVL NQPPEVWDGG VGFVSKEMIQ THCPAPASDI QILRCGPPPM NKAMAANLEA LGYSPEMQFQ F
101: TPTTLDSDVG RFELVIKMYP QGRMSHHFRE MRVGDHLAVK GPKGRFKYQP GQFRAFGMLA GGSGITPMFQ VARAILENPT DKTKVHLIYA NVTYDDILLK
201: EELEGLTTNY PEQFKIFYVL NQPPEVWDGG VGFVSKEMIQ THCPAPASDI QILRCGPPPM NKAMAANLEA LGYSPEMQFQ F
Arabidopsis Description
CBR1NADH-cytochrome b5 reductase [Source:UniProtKB/TrEMBL;Acc:A0A178US77]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,mitochondrion,cytosol,plasma membrane,golgi]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,mitochondrion,cytosol,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.