CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, peroxisome

Predictor Summary:

cytosol 1
mitochondrion 3
peroxisome 1
plastid 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH13184	Soybean	endoplasmic reticulum, peroxisome, plastid	94.28	94.28
KRG94933	Soybean	mitochondrion	57.91	71.37
KRG89951	Soybean	mitochondrion	32.32	69.57
KRH64963	Soybean	endoplasmic reticulum	62.96	67.27
VIT_13s0047g01190.t01	Wine grape	mitochondrion	64.98	66.1
KRG89948	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	30.3	64.29
KRH56619	Soybean	mitochondrion	39.73	36.53
KRH03716	Soybean	mitochondrion	39.06	36.36
KRH18814	Soybean	cytosol, mitochondrion, plastid	25.93	16.81
KRH53180	Soybean	cytosol, mitochondrion, peroxisome	40.07	13.37
KRH16605	Soybean	cytosol	37.37	12.53
KRH18816	Soybean	cytosol, mitochondrion, peroxisome	37.37	12.53
KRH16606	Soybean	cytosol	36.7	12.49

Protein Annotations

EntrezGene:100784114	Gene3D:2.40.30.10	Gene3D:3.40.50.80	MapMan:50.1.6	EMBL:ACUP02004951	InterPro:Fd_Rdtase_FAD-bd
InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	EnsemblPlantsGene:GLYMA_08G228300	GO:GO:0003674	GO:GO:0003824	GO:GO:0004128	GO:GO:0005575
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016491	GO:GO:0022900	GO:GO:0055114	UniProt:I1KVY3	InterPro:IPR017927	EnsemblPlants:KRH44741
ProteinID:KRH44741	ProteinID:KRH44741.1	InterPro:NADH-Cyt_B5_reductase	InterPro:OxRdtase_FAD-bd_dom	InterPro:OxRdtase_FAD/NAD-bd	PFAM:PF00175
PFAM:PF00970	PRINTS:PR00371	PRINTS:PR00406	PFscan:PS51384	PANTHER:PTHR19370	PANTHER:PTHR19370:SF97
InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI0002339289	SEG:seg

Description

hypothetical protein

Coordinates

chr8:-:18606637..18612632

Molecular Weight (calculated)

33527.0 Da

IEP (calculated)

10.006

GRAVY (calculated)

-0.232

Length

297 amino acids

Sequence
(BLAST)

001: MLELPFNMAL RFPKLDFKSF PFTENLNPEL LGHVVALVAV GFTAAYIYYR AKHPKGSLDP KNFKEFKLIK KTQLSHNVAR FKFALPTPSS VLGLPVGKNI
101: LARGKDSQGE EVMRSYTPIT LDSNIGYFEL VVKMYPNGKM SHHFRQMKEG DFLAVRGPKG RFTYKPGQVR AFGMIAGGSG ITPMFQLIRA ILENPKDKTK
201: VHLVYANVTV DDILLKEELD NFANKFAQRF EVYHVLNKPP EQWNGGIGFI SKEIIKSHCP EPAQDIQILR CGPPPMNKAM ATHLDALGYT SNMQFEF

Best Arabidopsis Sequence Match ( AT5G17770.1 )
(BLAST)

001: MDTEFLRTLD RQILLGVFVA FVAVGAGAAY FLTSSKKRRV CLDPENFKEF KLVKRHQLSH NVAKFVFELP TSTSVLGLPI GQHISCRGKD GQGEDVIKPY
101: TPTTLDSDVG RFELVIKMYP QGRMSHHFRE MRVGDHLAVK GPKGRFKYQP GQFRAFGMLA GGSGITPMFQ VARAILENPT DKTKVHLIYA NVTYDDILLK
201: EELEGLTTNY PEQFKIFYVL NQPPEVWDGG VGFVSKEMIQ THCPAPASDI QILRCGPPPM NKAMAANLEA LGYSPEMQFQ F

Arabidopsis Description

CBR1NADH-cytochrome b5 reductase [Source:UniProtKB/TrEMBL;Acc:A0A178US77]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,mitochondrion,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.