Factsheet for GSMUA_Achr9P15480_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
mitochondrion 2
peroxisome 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G77760.1	GSMUA_Achr11P...	AT3G48150.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d049995_P001	Maize	cytosol, mitochondrion, peroxisome, plastid	66.84	74.37
Zm00001d031769_P001	Maize	mitochondrion	64.31	70.2
Zm00001d052139_P001	Maize	cytosol, mitochondrion, peroxisome	57.26	66.36
GSMUA_Achr8P23160_001	Banana	mitochondrion	59.92	65.79
Zm00001d018206_P001	Maize	peroxisome	57.66	65.61
EES13985	Sorghum	cytosol, mitochondrion, peroxisome, plastid	78.96	64.39
Os08t0468100-01	Rice	plastid	78.3	64.19
TraesCS6B01G024900.1	Wheat	cytosol, plastid	76.96	63.24
Os08t0468700-00	Rice	plastid	77.1	63.21
TraesCS6A01G017500.2	Wheat	cytosol, plastid	76.7	63.02
TraesCS6D01G020700.1	Wheat	cytosol, plastid	76.7	63.02
TraesCS7D01G073700.1	Wheat	cytosol, nucleus, peroxisome	72.44	62.46
TraesCS7A01G078500.1	Wheat	cytosol	71.64	62.12
CDY68886	Canola	cytosol, mitochondrion	59.92	61.9
VIT_18s0001g03910.t01	Wine grape	plastid	74.7	61.72
HORVU6Hr1G003300.1	Barley	mitochondrion	77.1	60.88
TraesCS4A01G376700.1	Wheat	cytosol	71.5	59.93
CDX87504	Canola	cytosol	41.15	59.77
KRH53180	Soybean	cytosol, mitochondrion, peroxisome	70.71	59.66
TraesCS6D01G306000.1	Wheat	cytosol, peroxisome, plastid	70.84	59.44
KRH18816	Soybean	cytosol, mitochondrion, peroxisome	70.04	59.37
TraesCS6A01G326200.1	Wheat	plastid	70.97	59.29
PGSC0003DMT400077648	Potato	cytosol	71.9	59.28
Solyc11g013810.1.1	Tomato	cytosol, nucleus	71.9	59.21
Os02t0770800-01	Rice	cytosol	70.04	59.17
TraesCS6B01G356800.1	Wheat	cytosol, peroxisome, plastid	70.57	59.09
EES07601	Sorghum	cytosol, mitochondrion, peroxisome	70.04	58.97
Bra008333.1-P	Field mustard	plastid	69.24	57.4
CDX68044	Canola	plastid	69.51	57.36
Bra003670.1-P	Field mustard	plastid	69.51	57.36
GSMUA_Achr3P07200_001	Banana	cytosol	85.75	57.24
CDX79234	Canola	plastid	69.37	57.19
Bra015656.1-P	Field mustard	cytosol	67.64	57.08
AT1G37130.1	Thale cress	cytosol	69.37	56.82
CDX88386	Canola	cytosol, plastid	67.24	56.49
AT1G77760.1	Thale cress	cytosol	68.84	56.38
KRH16605	Soybean	cytosol	66.18	56.09
Zm00001d017025_P001	Maize	cytosol	65.65	55.39
KRH16606	Soybean	cytosol	63.25	54.41
OQU85223	Sorghum	cytosol	66.18	53.85
GSMUA_Achr5P05830_001	Banana	cytosol	23.83	50.0
KRH18814	Soybean	cytosol, mitochondrion, plastid	30.23	49.56
CDY26836	Canola	cytosol	36.35	49.01
CDX87505	Canola	cytosol, mitochondrion, peroxisome, plastid	12.92	34.77
GSMUA_Achr5P05820_001	Banana	mitochondrion, nucleus, peroxisome	18.77	30.85
GSMUA_Achr8P21540_001	Banana	endoplasmic reticulum	8.26	22.38
GSMUA_Achr10P...	Banana	mitochondrion	8.12	18.43

Protein Annotations

Gene3D:2.60.40.650	MapMan:25.1.4.1	Gene3D:3.10.120.10	Gene3D:3.40.50.80	Gene3D:3.90.420.10	InterPro:Cyt_B5-like_heme/steroid-bd
InterPro:Cyt_B5-like_heme/steroid_sf	InterPro:Cyt_B5_heme-BS	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0020037	GO:GO:0030151
GO:GO:0042128	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr9G15480_001	EnsemblPlants:GSMUA_Achr9P15480_001	EnsemblPlants:GSMUA_Achr9T15480_001
InterPro:IPR001199	InterPro:IPR036374	InterPro:IPR036400	InterPro:Ig_E-set	UniProt:M0U0K6	InterPro:MoCF_OxRdtse_dimer
InterPro:Mopterin_OxRdtase_euk	InterPro:OxRdtase_FAD/NAD-bd	InterPro:OxRdtase_Mopterin-bd_dom	InterPro:OxRdtase_Mopterin-bd_sf	PFAM:PF00173	PFAM:PF00174
PFAM:PF00175	PFAM:PF03404	PRINTS:PR00363	PRINTS:PR00371	PRINTS:PR00407	ScanProsite:PS00191
PFscan:PS50255	PANTHER:PTHR19370	PANTHER:PTHR19370:SF182	SMART:SM01117	SUPFAM:SSF52343	SUPFAM:SSF55856
SUPFAM:SSF56524	SUPFAM:SSF81296	UniParc:UPI000296EEEC	SEG:seg	:	:

Description

Nitrate reductase [NADH] 1 [Source:GMGC_GENE;Acc:GSMUA_Achr9G15480_001]

Coordinates

chr9:+:10207222..10210395

Molecular Weight (calculated)

84682.7 Da

IEP (calculated)

6.651

GRAVY (calculated)

-0.444

Length

751 amino acids

Sequence
(BLAST)

001: MAASVDNRQF GRLEPGNALV SPVVGKTFGT HHRSDSPVRG CSFPPLVPLC RDDDEEDEEE EAIDWKKLYG GSHLEVEPSV RDRRDEGTAD GWIERNPSLI
101: RLTGKHPFNC EPPLARLMHH GFITPVPLHY VRNHGAVPKA DWRTWTIPVT LVCAGNRRKE QNMVQQSIGF NWGPAAISTT VWRGARLRDV LRRCGVMGRK
201: DGALFVCFEG AEDLPGGGGS KYGTSLRREV AMDPSRDVML AYMQNGEMLT PDHGFPVRVI IPGFIGGRMV KWLKRIIVTP QESDSHYHYK DNRVLPSHVD
301: AELANAEAWW YKPEYIINEL NINSVITTPG HDEILPINAF TTQRPYTMRG YAYSGGGRKV TRVEVTLDGG ETWLVCALDH SEKPNKYGKH WCWCFWSLEV
401: EVLDLLSTKE VAVRAWDESL NTQPEKLIWN VMGMMNNCWF KVKVNVCRPH KGEIGLMFEH PTQPGNQSGG WMARQKHLET SEAPTLKKST STPFMNTATK
501: QFTMSEVRKH ASRESAWIVV HGHVYDCTGF IKDHPGGADS ILINAGGDCT EEFDAIHSDK AKALLDTYRI GELIPSGYIS DTSVHGASDL SHLSTIREVS
601: RPSALVNPRE KVQCKLVSKT IVSHDVRLFR FALPSADHAV LRDPEDRTEM HLVYANKSED DMLLWDELDG WARDRPEQFK VWYVIDEAKR GEEWRYSTGF
701: ITESILREHI PVGGSDDTLA LACGPPPMIR FAVVPNLEKM KYDTANSLLQ F

Best Arabidopsis Sequence Match ( AT1G77760.1 )
(BLAST)

001: MATSVDNRHY PTMNGVAHAF KPPLVPSPRS FDRHRHQNQT LDVILTETKI VKETEVITTV VDSYDDSSSD DEDESHNRNV PYYKELVKKS NSDLEPSILD
101: PRDESTADSW IQRNSSMLRL TGKHPFNAEA PLPRLMHHGF ITPVPLHYVR NHGAVPKANW SDWSIEITGL VKRPAKFTME ELISEFPSRE FPVTLVCAGN
201: RRKEQNMVKQ TIGFNWGSAG VSTSLWKGIP LSEILRRCGI YSRRGGALNV CFEGAEDLPG GGGSKYGTSI KKEMAMDPAR DIILAYMQNG ELLTPDHGFP
301: VRVIVPGFIG GRMVKWLKRI IVTPQESDSY YHYKDNRVLP SLVDAELANS EAWWYKPEYI INELNINSVI TTPGHAEILP INAFTTQKPY TLKGYAYSGG
401: GKKVTRVEVT LDGGDTWSVC ELDHQEKPNK YGKFWCWCFW SLDVEVLDLL SAKDVAVRAW DESFNTQPDK LIWNLMGMMN NCWFRIRTNV CKPHRGEIGI
501: VFEHPTRPGN QSGGWMAKER QLEISSESNN TLKKSVSSPF MNTASKMYSI SEVRKHNTAD SAWIIVHGHI YDCTRFLKDH PGGTDSILIN AGTDCTEEFE
601: AIHSDKAKKL LEDYRIGELI TTGYDSSPNV SVHGASNFGP LLAPIKELTP QKNIALVNPR EKIPVRLIEK TSISHDVRKF RFALPSEDQQ LGLPVGKHVF
701: VCANINDKLC LRAYTPTSAI DAVGHIDLVV KVYFKDVHPR FPNGGLMSQH LDSLPIGSMI DIKGPLGHIE YKGKGNFLVS GKPKFAKKLA MLAGGTGITP
801: IYQIIQSILS DPEDETEMYV VYANRTEDDI LVREELEGWA SKHKERLKIW YVVEIAKEGW SYSTGFITEA VLREHIPEGL EGESLALACG PPPMIQFALQ
901: PNLEKMGYNV KEDLLIF

Arabidopsis Description

NIA1Nitrate reductase [Source:UniProtKB/TrEMBL;Acc:A0A178WBR8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.