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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • plastid 3
  • mitochondrion 2
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plastid
Any Predictor:cytosol, mitochondrion, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
PProwler:plastid
TargetP:plastid
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS6A01G251400.1
TraesCS6B01G273900.1
TraesCS6D01G233200.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G77760.1 TraesCS6A01G251400.1 AT3G48150.1 21798944
AT1G77760.1 TraesCS6B01G273900.1 AT3G48150.1 21798944
AT1G77760.1 TraesCS6D01G233200.1 AT3G48150.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G024900.1 Wheat cytosol, plastid 97.81 97.81
TraesCS6A01G017500.2 Wheat cytosol, plastid 97.48 97.48
HORVU6Hr1G003300.1 Barley mitochondrion 95.84 92.11
TraesCS7D01G073700.1 Wheat cytosol, nucleus, peroxisome 82.93 87.03
Os08t0468100-01 Rice plastid 85.78 85.59
Zm00001d049995_P001 Maize cytosol, mitochondrion, peroxisome, plastid 62.69 84.89
Os08t0468700-00 Rice plastid 84.68 84.5
EES13985 Sorghum cytosol, mitochondrion, peroxisome, plastid 84.9 84.26
Zm00001d031769_P001 Maize mitochondrion 62.36 82.85
GSMUA_Achr9P15480_001 Banana cytosol 63.02 76.7
GSMUA_Achr8P23160_001 Banana mitochondrion 53.83 71.93
VIT_18s0001g03910.t01 Wine grape plastid 70.35 70.74
CDY68886 Canola cytosol, mitochondrion 55.69 70.01
TraesCS6D01G306000.1 Wheat cytosol, peroxisome, plastid 67.72 69.16
KRH18816 Soybean cytosol, mitochondrion, peroxisome 66.41 68.51
PGSC0003DMT400077648 Potato cytosol 67.94 68.17
Solyc11g013810.1.1 Tomato cytosol, nucleus 67.94 68.09
KRH53180 Soybean cytosol, mitochondrion, peroxisome 66.19 67.98
AT1G37130.1 Thale cress cytosol 65.97 65.76
Bra003670.1-P Field mustard plastid 65.43 65.71
CDX79234 Canola plastid 65.43 65.64
Bra015656.1-P Field mustard cytosol 63.9 65.62
CDX88386 Canola cytosol, plastid 64.11 65.55
CDX68044 Canola plastid 65.21 65.49
KRH16605 Soybean cytosol 63.24 65.24
Bra008333.1-P Field mustard plastid 64.22 64.79
AT1G77760.1 Thale cress cytosol 64.0 63.8
KRH16606 Soybean cytosol 60.83 63.69
CDX87505 Canola cytosol, mitochondrion, peroxisome, plastid 19.37 63.44
CDY26836 Canola cytosol 37.97 62.3
KRH18814 Soybean cytosol, mitochondrion, plastid 30.63 61.14
CDX87504 Canola cytosol 34.03 60.15
GSMUA_Achr3P07200_001 Banana cytosol 70.35 57.16
GSMUA_Achr5P05820_001 Banana mitochondrion, nucleus, peroxisome 24.84 49.67
GSMUA_Achr5P05830_001 Banana cytosol 18.16 46.37
TraesCS1D01G305400.1 Wheat endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole 11.6 37.99
TraesCS3D01G332300.1 Wheat unclear 11.6 37.99
TraesCS3D01G129500.1 Wheat mitochondrion 11.71 34.63
Protein Annotations
Gene3D:2.40.30.10Gene3D:2.60.40.650MapMan:25.1.4.1Gene3D:3.10.120.10Gene3D:3.40.50.80Gene3D:3.90.420.10
InterPro:Cyt_B5-like_heme/steroid-bdInterPro:Cyt_B5-like_heme/steroid_sfInterPro:Cyt_B5_heme-BSInterPro:Fd_Rdtase_FAD-bdInterPro:Flavoprot_Pyr_Nucl_cyt_RdtaseGO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0006809GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0016491GO:GO:0020037GO:GO:0030151GO:GO:0042128GO:GO:0043546
GO:GO:0050464GO:GO:0055114InterPro:IPR001199InterPro:IPR017927InterPro:IPR036374InterPro:IPR036400
InterPro:Ig_E-setInterPro:MoCF_OxRdtse_dimerInterPro:Mopterin_OxRdtase_eukInterPro:NADH-Cyt_B5_reductaseInterPro:Nitr_rd_NADHInterPro:OxRdtase_FAD-bd_dom
InterPro:OxRdtase_FAD/NAD-bdInterPro:OxRdtase_Mopterin-bd_domInterPro:OxRdtase_Mopterin-bd_sfInterPro:OxRdtase_Mopterin_BSPFAM:PF00173PFAM:PF00174
PFAM:PF00175PFAM:PF00970PFAM:PF03404PIRSF:PIRSF000233PRINTS:PR00363PRINTS:PR00371
PRINTS:PR00406PRINTS:PR00407ScanProsite:PS00191ScanProsite:PS00559PFscan:PS50255PFscan:PS51384
PANTHER:PTHR19370PANTHER:PTHR19370:SF182InterPro:Riboflavin_synthase-like_b-brlSMART:SM01117SUPFAM:SSF52343SUPFAM:SSF55856
SUPFAM:SSF56524SUPFAM:SSF63380SUPFAM:SSF81296EnsemblPlantsGene:TraesCS6D01G020700EnsemblPlants:TraesCS6D01G020700.1TIGR:cd02112
TIGR:cd06183SEG:seg::::
Description
No Description!
Coordinates
chr6D:-:8150342..8155798
Molecular Weight (calculated)
101773.0 Da
IEP (calculated)
6.389
GRAVY (calculated)
-0.394
Length
914 amino acids
Sequence
(BLAST)
001: MAASVEPRQS FGRLDAPATA PPARNGASNG IRRRADSPVR GCGFPPLISP PRKALVEEDE DEDDDEEPEE DWREAYGSQL QLEVEPSTRD PRDEGTADAW
101: IDRNPSLIRL TGKHPLNCEP PLARLMHHGF ITPAPLHYVR NHGAVPRGDW STWTVEVTGL VRRPARLTMD ELANGFAAAE LPATLVCAGN RRKEQNMVQQ
201: TVGFNWGAAG VSTSVWRGAR LRDVLLRCGI MSSSKKGQAL NVCFEGAEDL PGGGGSKYGT SVTREWALDP SRDILLAYAQ NGEPLLPDHG YPVRVLIPGC
301: IGGRMVKWLR RIVVTTAESD NYYHFKDNRV LPSHVDAELA NSEAWWYRPE YIINELNTNS VITTPGHDEI LPINAFTTQR AYTMKGYAYS GGGKKITRVE
401: VTLDGGESWM LCTLDIPEKP NKYGRYWCWC FWSVEIEVLD LLGAKEVSVR AWDQTHNTQP EKLIWNLMGM MNNCWFKVKV NVCRPHKGEI GLVFEHPTQP
501: GNQTGGWMAR QKHLETAEAA APGLKRSTST PFMNTVADKQ FTMSEVRKHG SKESAWIVVH GHVYDCTAFL KDHPGGADSI LINAGSDCTE EFDAIHSDKA
601: KALLDTYRIG ELITTGTGYN SDNSVHGGSS LSHLAPIREA TKVAGAPIAL SSPREKVPCR LVDKKELSHD VRLFRFALPS SDQVLGLPVG KHIFVCATID
701: GKLCMRAYTP TSMVDEIGQF ELLVKVYFRD EHPKFPNGGL MTQYLESLQL GSCIDVKGPL GHVEYTGRGN FVINGKQRRA RRLAMICGGS GITPMYQVIQ
801: AVLRDQPEDE TEMHLVYANR SEDDILLRDE LDRWAAEYPE RLKVWYVIDQ VKRPEDGWRF SVGFVTEDIL RAHVPEGGDE TLALACGPPP MIKFAISPNL
901: EKMKYDMANS FISF
Best Arabidopsis Sequence Match ( AT1G77760.1 )
(BLAST)
001: MATSVDNRHY PTMNGVAHAF KPPLVPSPRS FDRHRHQNQT LDVILTETKI VKETEVITTV VDSYDDSSSD DEDESHNRNV PYYKELVKKS NSDLEPSILD
101: PRDESTADSW IQRNSSMLRL TGKHPFNAEA PLPRLMHHGF ITPVPLHYVR NHGAVPKANW SDWSIEITGL VKRPAKFTME ELISEFPSRE FPVTLVCAGN
201: RRKEQNMVKQ TIGFNWGSAG VSTSLWKGIP LSEILRRCGI YSRRGGALNV CFEGAEDLPG GGGSKYGTSI KKEMAMDPAR DIILAYMQNG ELLTPDHGFP
301: VRVIVPGFIG GRMVKWLKRI IVTPQESDSY YHYKDNRVLP SLVDAELANS EAWWYKPEYI INELNINSVI TTPGHAEILP INAFTTQKPY TLKGYAYSGG
401: GKKVTRVEVT LDGGDTWSVC ELDHQEKPNK YGKFWCWCFW SLDVEVLDLL SAKDVAVRAW DESFNTQPDK LIWNLMGMMN NCWFRIRTNV CKPHRGEIGI
501: VFEHPTRPGN QSGGWMAKER QLEISSESNN TLKKSVSSPF MNTASKMYSI SEVRKHNTAD SAWIIVHGHI YDCTRFLKDH PGGTDSILIN AGTDCTEEFE
601: AIHSDKAKKL LEDYRIGELI TTGYDSSPNV SVHGASNFGP LLAPIKELTP QKNIALVNPR EKIPVRLIEK TSISHDVRKF RFALPSEDQQ LGLPVGKHVF
701: VCANINDKLC LRAYTPTSAI DAVGHIDLVV KVYFKDVHPR FPNGGLMSQH LDSLPIGSMI DIKGPLGHIE YKGKGNFLVS GKPKFAKKLA MLAGGTGITP
801: IYQIIQSILS DPEDETEMYV VYANRTEDDI LVREELEGWA SKHKERLKIW YVVEIAKEGW SYSTGFITEA VLREHIPEGL EGESLALACG PPPMIQFALQ
901: PNLEKMGYNV KEDLLIF
Arabidopsis Description
NIA1Nitrate reductase [Source:UniProtKB/TrEMBL;Acc:A0A178WBR8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.