Factsheet for GSMUA_Achr8P23160_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G77760.1	GSMUA_Achr11P...	AT3G48150.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68886	Canola	cytosol, mitochondrion	68.13	64.1
GSMUA_Achr9P15480_001	Banana	cytosol	65.79	59.92
CDX87505	Canola	cytosol, mitochondrion, peroxisome, plastid	24.12	59.14
TraesCS7D01G073700.1	Wheat	cytosol, nucleus, peroxisome	72.08	56.6
CDY26836	Canola	cytosol	46.05	56.55
KRH18814	Soybean	cytosol, mitochondrion, plastid	37.57	56.11
TraesCS7A01G078500.1	Wheat	cytosol	70.91	56.0
EES13985	Sorghum	cytosol, mitochondrion, peroxisome, plastid	74.85	55.59
KRH53180	Soybean	cytosol, mitochondrion, peroxisome	71.78	55.17
KRH18816	Soybean	cytosol, mitochondrion, peroxisome	71.2	54.97
EES07601	Sorghum	cytosol, mitochondrion, peroxisome	71.34	54.71
VIT_18s0001g03910.t01	Wine grape	plastid	72.66	54.68
Os02t0770800-01	Rice	cytosol	71.05	54.67
Os08t0468100-01	Rice	plastid	72.81	54.37
TraesCS6D01G306000.1	Wheat	cytosol, peroxisome, plastid	70.91	54.19
TraesCS6B01G356800.1	Wheat	cytosol, peroxisome, plastid	71.05	54.18
TraesCS4A01G376700.1	Wheat	cytosol	70.91	54.13
TraesCS6B01G024900.1	Wheat	cytosol, plastid	72.22	54.05
TraesCS6A01G326200.1	Wheat	plastid	70.91	53.95
TraesCS6A01G017500.2	Wheat	cytosol, plastid	72.08	53.94
Os08t0468700-00	Rice	plastid	72.22	53.93
Zm00001d052139_P001	Maize	cytosol, mitochondrion, peroxisome	51.02	53.86
TraesCS6D01G020700.1	Wheat	cytosol, plastid	71.93	53.83
Zm00001d031769_P001	Maize	mitochondrion	54.09	53.78
Zm00001d049995_P001	Maize	cytosol, mitochondrion, peroxisome, plastid	53.07	53.78
Zm00001d018206_P001	Maize	peroxisome	51.17	53.03
KRH16605	Soybean	cytosol	68.13	52.6
KRH16606	Soybean	cytosol	66.81	52.35
PGSC0003DMT400077648	Potato	cytosol	69.59	52.25
Zm00001d017025_P001	Maize	cytosol	67.98	52.25
Solyc11g013810.1.1	Tomato	cytosol, nucleus	69.59	52.19
Bra003670.1-P	Field mustard	plastid	69.15	51.98
CDX68044	Canola	plastid	69.15	51.98
Bra008333.1-P	Field mustard	plastid	68.71	51.88
CDX79234	Canola	plastid	69.01	51.81
HORVU6Hr1G003300.1	Barley	mitochondrion	71.93	51.73
Bra015656.1-P	Field mustard	cytosol	66.52	51.12
CDX88386	Canola	cytosol, plastid	66.67	51.01
AT1G77760.1	Thale cress	cytosol	68.27	50.93
AT1G37130.1	Thale cress	cytosol	67.84	50.6
OQU85223	Sorghum	cytosol	67.11	49.73
GSMUA_Achr3P07200_001	Banana	cytosol	81.29	49.42
CDX87504	Canola	cytosol	31.73	41.97
GSMUA_Achr8P21540_001	Banana	endoplasmic reticulum	15.2	37.55
GSMUA_Achr5P05830_001	Banana	cytosol	18.42	35.2
GSMUA_Achr5P05820_001	Banana	mitochondrion, nucleus, peroxisome	21.78	32.6
GSMUA_Achr10P...	Banana	mitochondrion	14.47	29.91

Protein Annotations

Gene3D:2.40.30.10	Gene3D:2.60.40.650	MapMan:25.1.4.1	Gene3D:3.10.120.10	Gene3D:3.40.50.80	Gene3D:3.90.420.10
InterPro:Cyt_B5-like_heme/steroid-bd	InterPro:Cyt_B5-like_heme/steroid_sf	InterPro:Cyt_B5_heme-BS	InterPro:Fd_Rdtase_FAD-bd	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491
GO:GO:0020037	GO:GO:0030151	GO:GO:0042128	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr8G23160_001
EnsemblPlants:GSMUA_Achr8P23160_001	EnsemblPlants:GSMUA_Achr8T23160_001	InterPro:IPR001199	InterPro:IPR017927	InterPro:IPR036374	InterPro:IPR036400
InterPro:Ig_E-set	UniProt:M0TSW9	InterPro:MoCF_OxRdtse_dimer	InterPro:Mopterin_OxRdtase_euk	InterPro:NADH-Cyt_B5_reductase	InterPro:OxRdtase_FAD-bd_dom
InterPro:OxRdtase_FAD/NAD-bd	InterPro:OxRdtase_Mopterin-bd_dom	InterPro:OxRdtase_Mopterin-bd_sf	PFAM:PF00173	PFAM:PF00174	PFAM:PF00175
PFAM:PF00970	PFAM:PF03404	PRINTS:PR00363	PRINTS:PR00371	PRINTS:PR00406	PRINTS:PR00407
ScanProsite:PS00191	PFscan:PS50255	PFscan:PS51384	PANTHER:PTHR19370	PANTHER:PTHR19370:SF182	InterPro:Riboflavin_synthase-like_b-brl
SMART:SM01117	SUPFAM:SSF52343	SUPFAM:SSF55856	SUPFAM:SSF56524	SUPFAM:SSF63380	SUPFAM:SSF81296
UniParc:UPI0002949898	:	:	:	:	:

Description

Nitrate reductase [NADH] 1 [Source:GMGC_GENE;Acc:GSMUA_Achr8G23160_001]

Coordinates

chr8:-:27699464..27705890

Molecular Weight (calculated)

76587.0 Da

IEP (calculated)

7.509

GRAVY (calculated)

-0.271

Length

684 amino acids

Sequence
(BLAST)

001: MLKLQHRNMV RQTMGFNWGP AAISTAVWRG ARLRDVLRRC GIRDRKDGVL FVCFEGAEDL PGGGGSKYGT SLRREAAMDA SRDVMLAYMQ NGELLKPDHG
101: FPVRIIIPGF IGGRMVKWLR RIIVAPQESN SYYHYKDNRV LPSHVDAELA DAEAWWYKPE YIINELNINS VIITPGHDEM LPVDTSTIQK PYLMRGYAYS
201: GGGRKVTRVE ITYDGGETWM PCALHHPEKP NKFGKYWCWC FWSVAVEVTD LLGVKEVAVR AWDESLNTQP EKLIWNVMGM MNNCWFKVKV NVRRHQKDEI
301: GLVFEHPTQP GSQSGGWMAP QKHLETSEVA SMKKSVSTPF MSTSTKRYAM SEVREHASAA SAWIVVHGHV YDCTAFIKDH PGGADSILVN AGSDCTEEFD
401: AIHSDKARAL LEAYRIGELA PSGNTFEASL RATIREAASR DVRLFRFALP SADQVLGLPV GKHIFLYATI DDKLCMRPYT PTSSVDDVGH FELLIKVYFK
501: GENARFPNGG LMSQHLESLP VGSTLDVKGP FGHIEYTGRG NFLVQGKPRI AKRLAMIAGG TGITPVYQVI RAALQDPEDH TEMHLVYANR TAEDILLREE
601: LDGWAREHPA QLKAWYVISE VKQGERWRYS TGRVTESILR GHIPVGGSDD TLVLACGPPP MIQLAVVPNL EKMGYDTANS LLMF

Best Arabidopsis Sequence Match ( AT1G77760.1 )
(BLAST)

001: MATSVDNRHY PTMNGVAHAF KPPLVPSPRS FDRHRHQNQT LDVILTETKI VKETEVITTV VDSYDDSSSD DEDESHNRNV PYYKELVKKS NSDLEPSILD
101: PRDESTADSW IQRNSSMLRL TGKHPFNAEA PLPRLMHHGF ITPVPLHYVR NHGAVPKANW SDWSIEITGL VKRPAKFTME ELISEFPSRE FPVTLVCAGN
201: RRKEQNMVKQ TIGFNWGSAG VSTSLWKGIP LSEILRRCGI YSRRGGALNV CFEGAEDLPG GGGSKYGTSI KKEMAMDPAR DIILAYMQNG ELLTPDHGFP
301: VRVIVPGFIG GRMVKWLKRI IVTPQESDSY YHYKDNRVLP SLVDAELANS EAWWYKPEYI INELNINSVI TTPGHAEILP INAFTTQKPY TLKGYAYSGG
401: GKKVTRVEVT LDGGDTWSVC ELDHQEKPNK YGKFWCWCFW SLDVEVLDLL SAKDVAVRAW DESFNTQPDK LIWNLMGMMN NCWFRIRTNV CKPHRGEIGI
501: VFEHPTRPGN QSGGWMAKER QLEISSESNN TLKKSVSSPF MNTASKMYSI SEVRKHNTAD SAWIIVHGHI YDCTRFLKDH PGGTDSILIN AGTDCTEEFE
601: AIHSDKAKKL LEDYRIGELI TTGYDSSPNV SVHGASNFGP LLAPIKELTP QKNIALVNPR EKIPVRLIEK TSISHDVRKF RFALPSEDQQ LGLPVGKHVF
701: VCANINDKLC LRAYTPTSAI DAVGHIDLVV KVYFKDVHPR FPNGGLMSQH LDSLPIGSMI DIKGPLGHIE YKGKGNFLVS GKPKFAKKLA MLAGGTGITP
801: IYQIIQSILS DPEDETEMYV VYANRTEDDI LVREELEGWA SKHKERLKIW YVVEIAKEGW SYSTGFITEA VLREHIPEGL EGESLALACG PPPMIQFALQ
901: PNLEKMGYNV KEDLLIF

Arabidopsis Description

NIA1Nitrate reductase [Source:UniProtKB/TrEMBL;Acc:A0A178WBR8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.